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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
60.8
nTPM
HPA Brain:
47.4
nTPM
GTEx:
60.8
nTPM
FANTOM5:
26.1
Scaled Tags Per Million
Pig:
0.0
nTPM
Mouse:
193.7
nTPM
Allen mouse:
2.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
47.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 38.6
2019
Male, age 18, unknown
52.5
2411
Female, age 72, unknown
44.2
1870
Female, age 42, unknown
42.4
1827
Male, age 72, unknown
39.6
1833
Male, age 53, unknown
38.8
1830
Male, age 51, unknown
38.7
2828
Female, age 72, unknown
38.1
2666
Male, age 74, left hemisphere
32.0
2586
Male, age 75, left hemisphere
30.1
2219
Male, age 76, both hemispheres
29.9
Dorsal raphe nucleus nTPM: 47.4
2298
Female, age 72, unknown
55.8
2016
Female, age 72, unknown
48.4
1828
Male, age 53, unknown
45.7
2047
Male, age 72, unknown
44.4
2750
Male, age 76, both hemispheres
42.7
Inferior colliculus nTPM: 43.3
2097
Female, age 72, unknown
53.1
1890
Male, age 53, unknown
45.1
1848
Female, age 42, unknown
43.0
2849
Male, age 72, unknown
32.1
Median raphe nucleus nTPM: 33.9
2220
Male, age 76, midline
33.9
Periaquaductal grey, anterior nTPM: 41.4
2502
Female, age 75, unknown
44.1
1947
Male, age 18, unknown
43.0
1795
Male, age 51, unknown
37.0
Periaquaductal grey, dorsal nTPM: 38.6
2464
Female, age 72, unknown
42.1
1840
Male, age 53, unknown
39.7
2850
Male, age 76, both hemispheres
39.7
1831
Male, age 72, unknown
33.0
Periaquaductal grey, lateral nTPM: 41.7
2272
Male, age 74, both hemispheres
47.4
2140
Male, age 76, both hemispheres
40.6
2053
Male, age 18, unknown
37.2
Pretectal area nTPM: 44.7
2273
Male, age 74, both hemispheres
54.2
2667
Female, age 75, unknown
53.0
2007
Male, age 72, unknown
48.4
1817
Female, age 42, unknown
46.7
2316
Male, age 76, right hemisphere
45.7
1816
Male, age 51, unknown
44.7
1944
Female, age 72, unknown
44.1
2224
Female, age 72, unknown
42.2
1815
Male, age 53, unknown
41.8
2825
Male, age 18, unknown
37.4
2407
Male, age 75, both hemispheres
33.8
Red nucleus nTPM: 43.3
1821
Female, age 72, unknown
55.6
1954
Female, age 42, unknown
49.3
1904
Male, age 53, unknown
47.8
2823
Male, age 76, right hemisphere
47.6
1865
Male, age 51, unknown
46.8
2769
Male, age 72, unknown
45.1
2785
Male, age 18, unknown
43.9
2227
Male, age 72, unknown
43.3
2503
Female, age 72, unknown
42.7
2725
Female, age 75, unknown
36.2
2588
Male, age 74, left hemisphere
32.9
2584
Male, age 75, left hemisphere
29.2
Substantia nigra nTPM: 42.0
2241
Male, age 72, unknown
54.8
1889
Female, age 72, unknown
48.4
1916
Female, age 42, unknown
45.9
2409
Female, age 72, unknown
45.4
1851
Male, age 51, unknown
44.8
1941
Male, age 53, unknown
39.2
2590
Female, age 75, unknown
38.2
2699
Male, age 18, unknown
36.4
2665
Male, age 74, both hemispheres
34.2
2583
Male, age 75, right hemisphere
32.5
Superior colliculus nTPM: 40.7
2587
Male, age 74, left hemisphere
44.6
1895
Male, age 76, right hemisphere
44.5
1913
Female, age 42, unknown
41.8
1995
Male, age 72, unknown
41.7
2261
Male, age 18, unknown
41.5
2087
Female, age 72, unknown
41.3
2668
Female, age 75, unknown
40.7
1839
Male, age 51, unknown
38.5
1796
Male, age 53, unknown
37.5
2664
Male, age 75, both hemispheres
35.1
Ventral tegmental area nTPM: 40.2
2410
Female, age 72, unknown
49.2
1915
Female, age 42, unknown
41.1
2021
Male, age 53, unknown
40.4
1942
Male, age 51, unknown
38.8
2218
Male, age 76, both hemispheres
36.1
2223
Female, age 72, unknown
35.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
60.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 60.8
Samples: 139
Max nTPM: 102.3
Min nTPM: 37.1
Std nTPM: 12.8
Median nTPM: 58.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
102.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
99.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
96.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
93.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
92.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
87.8
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
85.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
84.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
84.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
80.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
78.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
77.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
75.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
75.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
75.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
75.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
75.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
74.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
74.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
74.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
74.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
74.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
73.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
72.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
72.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
71.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
71.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
71.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
70.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
70.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
69.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
69.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
68.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
68.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
68.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
67.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
66.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
66.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
66.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
66.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
66.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
66.1
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
66.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
65.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
65.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
65.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
65.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
65.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
65.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
65.4
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
65.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
64.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
64.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
64.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
63.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
63.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
63.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
62.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
61.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
61.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
61.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
60.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
60.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
60.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
59.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
58.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
58.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
58.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
58.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
58.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
58.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
58.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
58.1
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
58.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
57.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
57.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
57.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
57.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
57.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
56.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
56.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
56.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
56.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
56.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
55.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
55.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
55.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
55.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
55.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
55.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
54.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
54.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
54.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
54.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
53.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
53.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
53.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
52.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
52.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
52.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
52.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
52.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
52.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
51.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
51.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
51.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
51.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
51.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
51.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
50.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
50.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
50.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
50.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
49.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
49.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
49.5
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
49.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
49.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
48.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
48.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
47.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
47.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
47.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
46.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
46.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
46.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
46.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
45.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
44.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
42.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
42.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
40.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
40.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
40.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
39.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
38.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
38.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
38.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
37.1
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
193.7
Mouse sample
Sample description
nTPM
Midbrain nTPM: 193.7
Samples: 4
Max nTPM: 201.5
Min nTPM: 184.2
Sample A
Male
201.5
Sample B
Male
189.4
Sample C
Female
184.2
Sample D
Female
199.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.