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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
827.2
nTPM
Monaco:
491.9
nTPM
Schmiedel:
144.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
827.2
HPA sample
nTPM
gdT-cell nTPM: 512.4
Samples: 6
Max nTPM: 631.7
Min nTPM: 310.6
P10809_1007
310.6
P10809_1022
509.8
P10809_1041
631.7
P10809_1060
502.6
P10809_1077
571.5
P10809_1098
548.3
MAIT T-cell nTPM: 504.1
Samples: 6
Max nTPM: 593.9
Min nTPM: 293.3
P10809_1006
293.3
P10809_1024
593.9
P10809_1043
511.8
P10809_1062
499.4
P10809_1083
565.5
P10809_1097
560.8
Memory CD4 T-cell nTPM: 565.6
Samples: 6
Max nTPM: 714.1
Min nTPM: 360.3
P10809_1014
360.3
P10809_1026
604.4
P10809_1045
497.5
P10809_1064
659.8
P10809_1086
714.1
P10809_1113
557.2
Memory CD8 T-cell nTPM: 545.8
Samples: 5
Max nTPM: 728.5
Min nTPM: 348.4
P10809_1012
348.4
P10809_1027
529.6
P10809_1046
493.3
P10809_1065
728.5
P10809_1111
629.1
Naive CD4 T-cell nTPM: 522.3
Samples: 6
Max nTPM: 687.6
Min nTPM: 283.3
P10809_1015
283.3
P10809_1030
565.1
P10809_1049
614.6
P10809_1068
519.8
P10809_1085
687.6
P10809_1112
463.4
Naive CD8 T-cell nTPM: 559.5
Samples: 6
Max nTPM: 719.7
Min nTPM: 285.1
P10809_1016
285.1
P10809_1031
638.1
P10809_1050
517.4
P10809_1069
673.1
P10809_1087
719.7
P10809_1110
523.7
T-reg nTPM: 827.2
Samples: 6
Max nTPM: 1257.7
Min nTPM: 505.3
P10809_1018
505.3
P10809_1037
739.8
P10809_1056
1257.7
P10809_1075
737.6
P10809_1094
869.8
P10809_1106
852.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
491.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 329.4
Samples: 4
Max nTPM: 466.9
Min nTPM: 231.8
RHH5202_R3573
374.7
RHH5230_R3602
244.3
RHH5259_R3631
231.8
RHH5288_R3660
466.9
Effector memory CD8 T-cell nTPM: 369.3
Samples: 4
Max nTPM: 462.3
Min nTPM: 264.4
RHH5203_R3574
462.3
RHH5231_R3603
426.4
RHH5260_R3632
264.4
RHH5289_R3661
324.2
MAIT T-cell nTPM: 323.9
Samples: 4
Max nTPM: 396.0
Min nTPM: 193.6
RHH5233_R3605
384.7
RHH5205_R3576
193.6
RHH5262_R3634
321.1
RHH5297_R3663
396.0
Memory CD4 T-cell TFH nTPM: 491.9
Samples: 4
Max nTPM: 732.0
Min nTPM: 384.7
RHH5300_R3666
446.9
RHH5236_R3608
732.0
RHH5265_R3637
384.7
RHH5208_R3579
403.9
Memory CD4 T-cell Th1 nTPM: 337.2
Samples: 4
Max nTPM: 461.2
Min nTPM: 240.4
RHH5210_R3581
375.2
RHH5302_R3668
461.2
RHH5238_R3610
240.4
RHH5267_R3639
272.0
Memory CD4 T-cell Th1/Th17 nTPM: 407.6
Samples: 4
Max nTPM: 617.5
Min nTPM: 180.6
RHH5303_R3669
617.5
RHH5211_R3582
558.9
RHH5239_R3611
180.6
RHH5268_R3640
273.3
Memory CD4 T-cell Th17 nTPM: 289.9
Samples: 4
Max nTPM: 465.9
Min nTPM: 200.0
RHH5304_R3670
266.4
RHH5212_R3583
465.9
RHH5240_R3612
227.2
RHH5269_R3641
200.0
Memory CD4 T-cell Th2 nTPM: 378.5
Samples: 4
Max nTPM: 486.9
Min nTPM: 290.6
RHH5305_R3671
339.6
RHH5213_R3584
396.8
RHH5241_R3613
486.9
RHH5270_R3642
290.6
Naive CD4 T-cell nTPM: 357.7
Samples: 4
Max nTPM: 492.8
Min nTPM: 207.3
RHH5306_R3672
366.7
RHH5214_R3585
492.8
RHH5242_R3614
363.9
RHH5271_R3643
207.3
Naive CD8 T-cell nTPM: 325.3
Samples: 4
Max nTPM: 453.7
Min nTPM: 198.9
RHH5201_R3572
388.4
RHH5229_R3601
198.9
RHH5258_R3630
453.7
RHH5287_R3659
260.2
Non-Vd2 gdTCR nTPM: 426.4
Samples: 4
Max nTPM: 564.9
Min nTPM: 222.5
RHH5235_R3607
222.5
RHH5264_R3636
564.9
RHH5207_R3578
398.7
RHH5299_R3665
519.6
T-reg nTPM: 418.8
Samples: 4
Max nTPM: 596.1
Min nTPM: 288.2
RHH5301_R3667
446.5
RHH5237_R3609
596.1
RHH5266_R3638
288.2
RHH5209_R3580
344.3
Terminal effector memory CD4 T-cell nTPM: 348.5
Samples: 2
Max nTPM: 473.5
Min nTPM: 223.4
RHH5243_R3615
223.4
RHH5272_R3644
473.5
Terminal effector memory CD8 T-cell nTPM: 489.2
Samples: 4
Max nTPM: 636.0
Min nTPM: 302.4
RHH5232_R3604
450.5
RHH5204_R3575
636.0
RHH5261_R3633
302.4
RHH5296_R3662
568.0
Vd2 gdTCR nTPM: 434.8
Samples: 4
Max nTPM: 555.5
Min nTPM: 303.1
RHH5234_R3606
395.9
RHH5206_R3577
555.5
RHH5263_R3635
303.1
RHH5298_R3664
484.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.