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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
93.9
nTPM
HPA Brain:
179.9
nTPM
GTEx:
93.9
nTPM
FANTOM5:
245.2
Scaled Tags Per Million
Pig:
104.0
nTPM
Mouse:
124.4
nTPM
Allen mouse:
9.6
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
179.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 151.5
2586
Male, age 75, left hemisphere
185.2
1833
Male, age 53, unknown
177.3
1830
Male, age 51, unknown
165.6
2019
Male, age 18, unknown
165.3
2828
Female, age 72, unknown
157.6
1870
Female, age 42, unknown
156.7
2411
Female, age 72, unknown
155.4
2666
Male, age 74, left hemisphere
132.3
1827
Male, age 72, unknown
113.4
2219
Male, age 76, both hemispheres
105.9
Dorsal raphe nucleus nTPM: 108.7
2750
Male, age 76, both hemispheres
152.1
1828
Male, age 53, unknown
115.9
2016
Female, age 72, unknown
108.9
2047
Male, age 72, unknown
90.9
2298
Female, age 72, unknown
76.0
Inferior colliculus nTPM: 108.4
2849
Male, age 72, unknown
120.5
1848
Female, age 42, unknown
114.3
1890
Male, age 53, unknown
108.7
2097
Female, age 72, unknown
90.2
Median raphe nucleus nTPM: 100.4
2220
Male, age 76, midline
100.4
Periaquaductal grey, anterior nTPM: 100.7
2502
Female, age 75, unknown
108.0
1947
Male, age 18, unknown
106.3
1795
Male, age 51, unknown
87.7
Periaquaductal grey, dorsal nTPM: 92.9
2464
Female, age 72, unknown
115.4
1831
Male, age 72, unknown
94.7
2850
Male, age 76, both hemispheres
90.3
1840
Male, age 53, unknown
71.4
Periaquaductal grey, lateral nTPM: 92.2
2053
Male, age 18, unknown
98.2
2140
Male, age 76, both hemispheres
92.6
2272
Male, age 74, both hemispheres
85.9
Pretectal area nTPM: 113.5
1815
Male, age 53, unknown
146.0
1817
Female, age 42, unknown
139.1
2407
Male, age 75, both hemispheres
135.3
2667
Female, age 75, unknown
128.3
2316
Male, age 76, right hemisphere
120.3
2007
Male, age 72, unknown
119.9
2825
Male, age 18, unknown
111.6
1816
Male, age 51, unknown
94.5
1944
Female, age 72, unknown
92.4
2273
Male, age 74, both hemispheres
81.6
2224
Female, age 72, unknown
79.7
Red nucleus nTPM: 179.9
1865
Male, age 51, unknown
205.9
1904
Male, age 53, unknown
201.5
1821
Female, age 72, unknown
197.2
2823
Male, age 76, right hemisphere
196.3
2769
Male, age 72, unknown
189.9
2227
Male, age 72, unknown
184.8
2785
Male, age 18, unknown
183.2
1954
Female, age 42, unknown
176.6
2588
Male, age 74, left hemisphere
176.1
2503
Female, age 72, unknown
163.9
2584
Male, age 75, left hemisphere
152.8
2725
Female, age 75, unknown
131.1
Substantia nigra nTPM: 120.3
2583
Male, age 75, right hemisphere
147.9
1851
Male, age 51, unknown
134.7
2409
Female, age 72, unknown
128.3
1889
Female, age 72, unknown
123.9
2699
Male, age 18, unknown
118.9
2590
Female, age 75, unknown
117.4
2665
Male, age 74, both hemispheres
112.7
1916
Female, age 42, unknown
109.8
1941
Male, age 53, unknown
105.5
2241
Male, age 72, unknown
103.8
Superior colliculus nTPM: 133.4
1995
Male, age 72, unknown
169.4
1913
Female, age 42, unknown
168.4
2668
Female, age 75, unknown
146.8
2664
Male, age 75, both hemispheres
142.0
1839
Male, age 51, unknown
138.4
1895
Male, age 76, right hemisphere
131.5
2587
Male, age 74, left hemisphere
122.9
1796
Male, age 53, unknown
109.6
2261
Male, age 18, unknown
102.5
2087
Female, age 72, unknown
102.4
Ventral tegmental area nTPM: 121.7
2223
Female, age 72, unknown
149.6
2410
Female, age 72, unknown
143.7
2218
Male, age 76, both hemispheres
112.5
1915
Female, age 42, unknown
109.8
2021
Male, age 53, unknown
107.9
1942
Male, age 51, unknown
106.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
93.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 93.9
Samples: 139
Max nTPM: 226.0
Min nTPM: 48.8
Std nTPM: 31.2
Median nTPM: 88.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
226.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
210.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
201.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
180.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
176.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
168.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
163.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
154.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
143.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
142.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
136.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
132.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
131.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
131.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
130.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
130.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
126.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
126.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
123.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
118.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
118.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
117.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
116.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
115.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
114.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
113.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
113.1
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
113.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
113.0
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
112.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
112.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
110.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
110.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
110.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
109.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
108.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
105.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
105.3
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
102.1
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
102.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
100.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
99.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
99.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
98.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
97.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
97.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
97.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
95.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
95.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
95.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
94.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
94.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
94.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
94.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
94.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
93.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
93.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
93.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
93.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
92.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
91.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
90.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
90.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
90.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
90.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
90.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
89.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
89.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
89.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
88.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
88.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
88.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
88.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
87.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
86.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
86.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
85.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
84.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
84.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
84.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
84.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
83.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
83.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
83.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
82.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
81.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
79.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
79.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
79.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
78.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
78.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
78.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
77.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
77.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
77.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
76.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
76.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
75.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
75.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
74.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
74.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
73.9
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
73.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
73.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
73.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
73.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
72.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
72.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
72.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
69.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
69.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
68.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
67.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
67.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
67.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
67.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
66.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
65.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
65.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
64.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
63.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
63.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
62.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
62.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
62.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
62.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
62.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
62.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
60.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
59.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
59.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
58.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
58.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
56.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
54.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
52.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
51.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
50.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
48.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
124.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 124.4
Samples: 4
Max nTPM: 133.6
Min nTPM: 118.7
Sample A
Male
119.5
Sample B
Male
118.7
Sample C
Female
133.6
Sample D
Female
125.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.