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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
330.5
nTPM
Monaco:
544.4
nTPM
Schmiedel:
255.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
330.5
HPA sample
nTPM
gdT-cell nTPM: 1.4
Samples: 6
Max nTPM: 4.9
Min nTPM: 0.1
P10809_1007
1.9
P10809_1022
4.9
P10809_1041
0.1
P10809_1060
0.2
P10809_1077
0.9
P10809_1098
0.5
MAIT T-cell nTPM: 62.8
Samples: 6
Max nTPM: 124.0
Min nTPM: 36.8
P10809_1006
42.9
P10809_1024
124.0
P10809_1043
60.3
P10809_1062
36.8
P10809_1083
68.8
P10809_1097
43.8
Memory CD4 T-cell nTPM: 204.7
Samples: 6
Max nTPM: 244.7
Min nTPM: 133.2
P10809_1014
220.8
P10809_1026
225.8
P10809_1045
244.7
P10809_1064
133.2
P10809_1086
227.1
P10809_1113
176.3
Memory CD8 T-cell nTPM: 179.5
Samples: 5
Max nTPM: 461.8
Min nTPM: 78.7
P10809_1012
148.3
P10809_1027
78.7
P10809_1046
118.9
P10809_1065
461.8
P10809_1111
89.9
Naive CD4 T-cell nTPM: 233.3
Samples: 6
Max nTPM: 373.5
Min nTPM: 173.3
P10809_1015
192.8
P10809_1030
245.6
P10809_1049
373.5
P10809_1068
181.2
P10809_1085
233.4
P10809_1112
173.3
Naive CD8 T-cell nTPM: 293.4
Samples: 6
Max nTPM: 1174.2
Min nTPM: 28.2
P10809_1016
149.1
P10809_1031
136.2
P10809_1050
154.4
P10809_1069
1174.2
P10809_1087
28.2
P10809_1110
118.3
T-reg nTPM: 330.5
Samples: 6
Max nTPM: 490.2
Min nTPM: 255.4
P10809_1018
302.8
P10809_1037
376.5
P10809_1056
490.2
P10809_1075
277.0
P10809_1094
281.1
P10809_1106
255.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
544.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 240.3
Samples: 4
Max nTPM: 313.8
Min nTPM: 170.1
RHH5202_R3573
283.0
RHH5230_R3602
194.2
RHH5259_R3631
170.1
RHH5288_R3660
313.8
Effector memory CD8 T-cell nTPM: 382.4
Samples: 4
Max nTPM: 901.5
Min nTPM: 159.7
RHH5203_R3574
901.5
RHH5231_R3603
212.4
RHH5260_R3632
159.7
RHH5289_R3661
255.8
MAIT T-cell nTPM: 209.3
Samples: 4
Max nTPM: 332.0
Min nTPM: 50.7
RHH5233_R3605
332.0
RHH5205_R3576
50.7
RHH5262_R3634
297.3
RHH5297_R3663
157.3
Memory CD4 T-cell TFH nTPM: 544.5
Samples: 4
Max nTPM: 759.8
Min nTPM: 401.7
RHH5300_R3666
401.7
RHH5236_R3608
759.8
RHH5265_R3637
508.7
RHH5208_R3579
507.6
Memory CD4 T-cell Th1 nTPM: 401.8
Samples: 4
Max nTPM: 471.4
Min nTPM: 349.9
RHH5210_R3581
426.1
RHH5302_R3668
359.7
RHH5238_R3610
349.9
RHH5267_R3639
471.4
Memory CD4 T-cell Th1/Th17 nTPM: 412.7
Samples: 4
Max nTPM: 640.7
Min nTPM: 313.9
RHH5303_R3669
382.2
RHH5211_R3582
640.7
RHH5239_R3611
314.1
RHH5268_R3640
313.9
Memory CD4 T-cell Th17 nTPM: 385.6
Samples: 4
Max nTPM: 501.8
Min nTPM: 217.4
RHH5304_R3670
381.2
RHH5212_R3583
501.8
RHH5240_R3612
442.1
RHH5269_R3641
217.4
Memory CD4 T-cell Th2 nTPM: 393.2
Samples: 4
Max nTPM: 620.9
Min nTPM: 269.5
RHH5305_R3671
269.5
RHH5213_R3584
315.7
RHH5241_R3613
620.9
RHH5270_R3642
366.6
Naive CD4 T-cell nTPM: 436.9
Samples: 4
Max nTPM: 530.7
Min nTPM: 223.9
RHH5306_R3672
223.9
RHH5214_R3585
530.7
RHH5242_R3614
505.1
RHH5271_R3643
488.0
Naive CD8 T-cell nTPM: 270.5
Samples: 4
Max nTPM: 417.0
Min nTPM: 169.6
RHH5201_R3572
417.0
RHH5229_R3601
169.6
RHH5258_R3630
308.3
RHH5287_R3659
187.0
Non-Vd2 gdTCR nTPM: 0.4
Samples: 4
Max nTPM: 1.6
Min nTPM: 0.0
RHH5235_R3607
1.6
RHH5264_R3636
0.0
RHH5207_R3578
0.0
RHH5299_R3665
0.0
T-reg nTPM: 482.2
Samples: 4
Max nTPM: 777.4
Min nTPM: 349.8
RHH5301_R3667
349.8
RHH5237_R3609
777.4
RHH5266_R3638
401.9
RHH5209_R3580
399.6
Terminal effector memory CD4 T-cell nTPM: 97.6
Samples: 2
Max nTPM: 162.2
Min nTPM: 33.0
RHH5243_R3615
33.0
RHH5272_R3644
162.2
Terminal effector memory CD8 T-cell nTPM: 172.8
Samples: 4
Max nTPM: 277.0
Min nTPM: 77.1
RHH5232_R3604
277.0
RHH5204_R3575
232.7
RHH5261_R3633
77.1
RHH5296_R3662
104.2
Vd2 gdTCR nTPM: 24.2
Samples: 4
Max nTPM: 39.2
Min nTPM: 11.5
RHH5234_R3606
21.0
RHH5206_R3577
11.5
RHH5263_R3635
25.0
RHH5298_R3664
39.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.