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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
320.1
nTPM
Monaco:
342.0
nTPM
Schmiedel:
67.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
320.1
HPA sample
nTPM
gdT-cell nTPM: 320.1
Samples: 6
Max nTPM: 442.3
Min nTPM: 220.4
P10809_1007
220.4
P10809_1022
355.9
P10809_1041
442.3
P10809_1060
321.5
P10809_1077
342.7
P10809_1098
237.8
MAIT T-cell nTPM: 2.8
Samples: 6
Max nTPM: 4.9
Min nTPM: 0.0
P10809_1006
4.9
P10809_1024
4.1
P10809_1043
4.5
P10809_1062
1.3
P10809_1083
1.7
P10809_1097
0.0
Memory CD4 T-cell nTPM: 131.1
Samples: 6
Max nTPM: 165.6
Min nTPM: 84.9
P10809_1014
102.1
P10809_1026
165.6
P10809_1045
151.9
P10809_1064
84.9
P10809_1086
119.8
P10809_1113
162.5
Memory CD8 T-cell nTPM: 151.6
Samples: 5
Max nTPM: 272.9
Min nTPM: 103.9
P10809_1012
272.9
P10809_1027
126.0
P10809_1046
103.9
P10809_1065
129.2
P10809_1111
125.8
Naive CD4 T-cell nTPM: 135.0
Samples: 6
Max nTPM: 187.2
Min nTPM: 77.1
P10809_1015
77.1
P10809_1030
187.2
P10809_1049
173.0
P10809_1068
103.7
P10809_1085
105.8
P10809_1112
162.9
Naive CD8 T-cell nTPM: 139.0
Samples: 6
Max nTPM: 215.5
Min nTPM: 88.7
P10809_1016
106.7
P10809_1031
215.5
P10809_1050
143.7
P10809_1069
88.7
P10809_1087
111.3
P10809_1110
168.0
T-reg nTPM: 207.6
Samples: 6
Max nTPM: 294.2
Min nTPM: 106.5
P10809_1018
106.5
P10809_1037
179.4
P10809_1056
294.2
P10809_1075
215.8
P10809_1094
226.9
P10809_1106
222.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
342.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 145.2
Samples: 4
Max nTPM: 193.2
Min nTPM: 88.6
RHH5202_R3573
193.2
RHH5230_R3602
88.6
RHH5259_R3631
114.5
RHH5288_R3660
184.6
Effector memory CD8 T-cell nTPM: 173.0
Samples: 4
Max nTPM: 382.6
Min nTPM: 76.7
RHH5203_R3574
95.1
RHH5231_R3603
76.7
RHH5260_R3632
137.4
RHH5289_R3661
382.6
MAIT T-cell nTPM: 6.9
Samples: 4
Max nTPM: 15.2
Min nTPM: 0.0
RHH5233_R3605
12.5
RHH5205_R3576
15.2
RHH5262_R3634
0.0
RHH5297_R3663
0.0
Memory CD4 T-cell TFH nTPM: 142.3
Samples: 4
Max nTPM: 210.5
Min nTPM: 80.4
RHH5300_R3666
117.5
RHH5236_R3608
160.9
RHH5265_R3637
80.4
RHH5208_R3579
210.5
Memory CD4 T-cell Th1 nTPM: 160.2
Samples: 4
Max nTPM: 221.5
Min nTPM: 82.6
RHH5210_R3581
82.6
RHH5302_R3668
195.0
RHH5238_R3610
141.5
RHH5267_R3639
221.5
Memory CD4 T-cell Th1/Th17 nTPM: 180.6
Samples: 4
Max nTPM: 244.2
Min nTPM: 123.1
RHH5303_R3669
244.2
RHH5211_R3582
123.1
RHH5239_R3611
146.9
RHH5268_R3640
208.0
Memory CD4 T-cell Th17 nTPM: 136.1
Samples: 4
Max nTPM: 203.4
Min nTPM: 97.8
RHH5304_R3670
203.4
RHH5212_R3583
103.2
RHH5240_R3612
139.9
RHH5269_R3641
97.8
Memory CD4 T-cell Th2 nTPM: 206.4
Samples: 4
Max nTPM: 327.7
Min nTPM: 118.1
RHH5305_R3671
327.7
RHH5213_R3584
118.1
RHH5241_R3613
194.1
RHH5270_R3642
185.7
Naive CD4 T-cell nTPM: 144.6
Samples: 4
Max nTPM: 185.6
Min nTPM: 102.2
RHH5306_R3672
102.2
RHH5214_R3585
108.4
RHH5242_R3614
182.3
RHH5271_R3643
185.6
Naive CD8 T-cell nTPM: 205.5
Samples: 4
Max nTPM: 384.2
Min nTPM: 111.0
RHH5201_R3572
176.5
RHH5229_R3601
384.2
RHH5258_R3630
111.0
RHH5287_R3659
150.4
Non-Vd2 gdTCR nTPM: 283.5
Samples: 4
Max nTPM: 422.2
Min nTPM: 183.4
RHH5235_R3607
422.2
RHH5264_R3636
241.4
RHH5207_R3578
183.4
RHH5299_R3665
286.8
T-reg nTPM: 193.1
Samples: 4
Max nTPM: 253.0
Min nTPM: 109.8
RHH5301_R3667
165.4
RHH5237_R3609
253.0
RHH5266_R3638
244.1
RHH5209_R3580
109.8
Terminal effector memory CD4 T-cell nTPM: 87.1
Samples: 2
Max nTPM: 174.1
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
174.1
Terminal effector memory CD8 T-cell nTPM: 83.9
Samples: 4
Max nTPM: 153.6
Min nTPM: 14.8
RHH5232_R3604
14.8
RHH5204_R3575
116.8
RHH5261_R3633
50.3
RHH5296_R3662
153.6
Vd2 gdTCR nTPM: 342.0
Samples: 4
Max nTPM: 408.0
Min nTPM: 268.6
RHH5234_R3606
306.9
RHH5206_R3577
384.6
RHH5263_R3635
268.6
RHH5298_R3664
408.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.