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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
426.5
nTPM
Monaco:
276.0
nTPM
Schmiedel:
165.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
426.5
HPA sample
nTPM
gdT-cell nTPM: 6.8
Samples: 6
Max nTPM: 8.7
Min nTPM: 4.9
P10809_1007
4.9
P10809_1022
8.7
P10809_1041
7.5
P10809_1060
7.2
P10809_1077
6.5
P10809_1098
6.2
MAIT T-cell nTPM: 48.6
Samples: 6
Max nTPM: 69.0
Min nTPM: 19.2
P10809_1006
69.0
P10809_1024
50.6
P10809_1043
45.6
P10809_1062
19.2
P10809_1083
66.1
P10809_1097
41.3
Memory CD4 T-cell nTPM: 156.8
Samples: 6
Max nTPM: 190.2
Min nTPM: 128.5
P10809_1014
179.0
P10809_1026
190.2
P10809_1045
129.3
P10809_1064
184.2
P10809_1086
129.8
P10809_1113
128.5
Memory CD8 T-cell nTPM: 239.2
Samples: 5
Max nTPM: 734.1
Min nTPM: 59.0
P10809_1012
113.8
P10809_1027
59.0
P10809_1046
136.5
P10809_1065
734.1
P10809_1111
152.4
Naive CD4 T-cell nTPM: 141.4
Samples: 6
Max nTPM: 186.6
Min nTPM: 107.8
P10809_1015
131.4
P10809_1030
164.9
P10809_1049
186.6
P10809_1068
107.8
P10809_1085
129.7
P10809_1112
127.9
Naive CD8 T-cell nTPM: 426.5
Samples: 6
Max nTPM: 2253.5
Min nTPM: 14.8
P10809_1016
61.5
P10809_1031
60.5
P10809_1050
75.3
P10809_1069
2253.5
P10809_1087
14.8
P10809_1110
93.3
T-reg nTPM: 230.0
Samples: 6
Max nTPM: 327.2
Min nTPM: 127.9
P10809_1018
127.9
P10809_1037
229.3
P10809_1056
327.2
P10809_1075
169.5
P10809_1094
281.7
P10809_1106
244.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
276.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 201.8
Samples: 4
Max nTPM: 399.5
Min nTPM: 69.6
RHH5202_R3573
110.6
RHH5230_R3602
69.6
RHH5259_R3631
399.5
RHH5288_R3660
227.3
Effector memory CD8 T-cell nTPM: 119.4
Samples: 4
Max nTPM: 192.8
Min nTPM: 50.0
RHH5203_R3574
50.0
RHH5231_R3603
69.8
RHH5260_R3632
164.8
RHH5289_R3661
192.8
MAIT T-cell nTPM: 143.9
Samples: 4
Max nTPM: 321.2
Min nTPM: 65.9
RHH5233_R3605
92.3
RHH5205_R3576
65.9
RHH5262_R3634
321.2
RHH5297_R3663
96.2
Memory CD4 T-cell TFH nTPM: 254.9
Samples: 4
Max nTPM: 417.5
Min nTPM: 133.0
RHH5300_R3666
250.7
RHH5236_R3608
218.4
RHH5265_R3637
417.5
RHH5208_R3579
133.0
Memory CD4 T-cell Th1 nTPM: 214.9
Samples: 4
Max nTPM: 347.9
Min nTPM: 135.7
RHH5210_R3581
135.7
RHH5302_R3668
139.4
RHH5238_R3610
347.9
RHH5267_R3639
236.4
Memory CD4 T-cell Th1/Th17 nTPM: 268.0
Samples: 4
Max nTPM: 380.4
Min nTPM: 166.9
RHH5303_R3669
348.8
RHH5211_R3582
166.9
RHH5239_R3611
176.0
RHH5268_R3640
380.4
Memory CD4 T-cell Th17 nTPM: 276.0
Samples: 4
Max nTPM: 383.5
Min nTPM: 209.4
RHH5304_R3670
383.5
RHH5212_R3583
209.4
RHH5240_R3612
249.8
RHH5269_R3641
261.4
Memory CD4 T-cell Th2 nTPM: 213.0
Samples: 4
Max nTPM: 330.1
Min nTPM: 56.7
RHH5305_R3671
330.1
RHH5213_R3584
56.7
RHH5241_R3613
169.8
RHH5270_R3642
295.5
Naive CD4 T-cell nTPM: 219.0
Samples: 4
Max nTPM: 291.2
Min nTPM: 163.9
RHH5306_R3672
291.2
RHH5214_R3585
195.8
RHH5242_R3614
224.9
RHH5271_R3643
163.9
Naive CD8 T-cell nTPM: 202.4
Samples: 4
Max nTPM: 249.7
Min nTPM: 117.8
RHH5201_R3572
117.8
RHH5229_R3601
219.3
RHH5258_R3630
249.7
RHH5287_R3659
222.7
Non-Vd2 gdTCR nTPM: 24.4
Samples: 4
Max nTPM: 47.9
Min nTPM: 15.0
RHH5235_R3607
18.6
RHH5264_R3636
15.0
RHH5207_R3578
16.0
RHH5299_R3665
47.9
T-reg nTPM: 251.8
Samples: 4
Max nTPM: 318.7
Min nTPM: 158.4
RHH5301_R3667
234.2
RHH5237_R3609
295.8
RHH5266_R3638
318.7
RHH5209_R3580
158.4
Terminal effector memory CD4 T-cell nTPM: 111.6
Samples: 2
Max nTPM: 212.9
Min nTPM: 10.2
RHH5243_R3615
10.2
RHH5272_R3644
212.9
Terminal effector memory CD8 T-cell nTPM: 142.3
Samples: 4
Max nTPM: 235.5
Min nTPM: 77.6
RHH5232_R3604
77.6
RHH5204_R3575
139.9
RHH5261_R3633
116.3
RHH5296_R3662
235.5
Vd2 gdTCR nTPM: 80.9
Samples: 4
Max nTPM: 254.2
Min nTPM: 0.0
RHH5234_R3606
22.4
RHH5206_R3577
0.0
RHH5263_R3635
46.9
RHH5298_R3664
254.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.