C5orf49

GENERAL INFORMATION

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Gene name

C5orf49

Gene description

Chromosome 5 open reading frame 49

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

2
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Group enriched (fallopian tube, testis)
GTEx:Tissue enhanced (testis)

Protein evidence

Evidence at transcript level

Protein localization

RNA data suggests expression in a selected group of tissues, most abundant in fallopian tube. RNA-based expert annotation gave inconclusive results.

ANTIBODY RELIABILITY

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Data reliability
description

Pending external verification. Presumed off target binding observed and disregarded.

Data reliability

Uncertain based on 1 antibody.
HPA043759
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
N/A
Endocrine tissues
N/A
Bone marrow & immune system
N/A
Muscle tissues
N/A
Lung
N/A
Nasopharynx
N/A
N/A
Bronchus
N/A
N/A
Lung
N/A
Liver & gallbladder
N/A
Liver
N/A
Pancreas
N/A
Pancreas
N/A
Gastrointestinal tract
N/A
Kidney & urinary bladder
N/A
Male tissues
N/A
Testis
N/A
Epididymis
N/A
N/A
Prostate
N/A
Seminal vesicle
N/A
N/A
Female tissues
N/A
Breast
N/A
N/A
Vagina
N/A
N/A
Cervix, uterine
N/A
N/A
Ovary
N/A
Placenta
N/A
Adipose & soft tissue
N/A
Skin
N/A
Skin
N/A
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.


RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Group enriched (fallopian tube, testis)

Organ

Expression

GTEx dataset
RNA tissue category:  Tissue enhanced (testis)

Organ

Expression



GENE INFORMATION

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Gene name

C5orf49 (HGNC Symbol)

Synonyms

LOC134121

Description

Chromosome 5 open reading frame 49 (HGNC Symbol)

Entrez gene summary

Chromosome

5

Cytoband

p15.31

Chromosome location (bp)

7830378 - 7851490

Protein evidence

Evidence at transcript level (all genes)

Ensembl

ENSG00000215217 (version 78.38)

Entrez gene

134121

UniProt

A4QMS7 (UniProt - Evidence at transcript level)

neXtProt

NX_A4QMS7

Antibodypedia

C5orf49 antibodies


PROTEIN BROWSER

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ENST00000399810
 
ENST00000509627
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

C5orf49-001 ENSP00000382708
ENST00000399810
A4QMS7
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Show » 147 17 No 0
C5orf49-002 ENSP00000426019
ENST00000509627
D6RHK3
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Show » 145 16.7 No 0