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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
37.7
nTPM
HPA Brain:
89.9
nTPM
GTEx:
37.7
nTPM
FANTOM5:
337.2
Scaled Tags Per Million
Pig:
27.6
nTPM
Mouse:
0.1
nTPM
Allen mouse:
4.4
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
89.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 50.6
2586
Male, age 75, left hemisphere
79.0
2828
Female, age 72, unknown
57.4
2411
Female, age 72, unknown
54.8
1830
Male, age 51, unknown
54.1
1833
Male, age 53, unknown
54.0
2019
Male, age 18, unknown
53.5
1870
Female, age 42, unknown
46.4
2666
Male, age 74, left hemisphere
44.5
1827
Male, age 72, unknown
36.3
2219
Male, age 76, both hemispheres
26.2
Dorsal raphe nucleus nTPM: 62.3
2298
Female, age 72, unknown
75.4
2016
Female, age 72, unknown
71.4
2750
Male, age 76, both hemispheres
60.2
2047
Male, age 72, unknown
53.5
1828
Male, age 53, unknown
51.1
Inferior colliculus nTPM: 48.8
1890
Male, age 53, unknown
56.0
2097
Female, age 72, unknown
52.0
1848
Female, age 42, unknown
46.3
2849
Male, age 72, unknown
40.8
Median raphe nucleus nTPM: 69.8
2220
Male, age 76, midline
69.8
Periaquaductal grey, anterior nTPM: 73.2
1795
Male, age 51, unknown
96.3
2502
Female, age 75, unknown
67.0
1947
Male, age 18, unknown
56.1
Periaquaductal grey, dorsal nTPM: 61.9
2850
Male, age 76, both hemispheres
77.0
1831
Male, age 72, unknown
74.9
2464
Female, age 72, unknown
52.4
1840
Male, age 53, unknown
43.2
Periaquaductal grey, lateral nTPM: 89.9
2272
Male, age 74, both hemispheres
114.8
2140
Male, age 76, both hemispheres
104.8
2053
Male, age 18, unknown
50.3
Pretectal area nTPM: 59.4
2224
Female, age 72, unknown
97.7
2273
Male, age 74, both hemispheres
91.5
2316
Male, age 76, right hemisphere
79.7
1817
Female, age 42, unknown
61.7
2007
Male, age 72, unknown
57.8
2825
Male, age 18, unknown
48.8
2667
Female, age 75, unknown
46.8
2407
Male, age 75, both hemispheres
46.5
1944
Female, age 72, unknown
43.8
1815
Male, age 53, unknown
42.6
1816
Male, age 51, unknown
36.8
Red nucleus nTPM: 56.0
2785
Male, age 18, unknown
73.6
2227
Male, age 72, unknown
69.7
2584
Male, age 75, left hemisphere
66.3
2769
Male, age 72, unknown
64.7
1904
Male, age 53, unknown
58.3
2503
Female, age 72, unknown
55.6
2725
Female, age 75, unknown
54.5
1865
Male, age 51, unknown
53.8
1954
Female, age 42, unknown
51.6
2588
Male, age 74, left hemisphere
45.6
1821
Female, age 72, unknown
41.9
2823
Male, age 76, right hemisphere
36.4
Substantia nigra nTPM: 54.1
2699
Male, age 18, unknown
87.6
1851
Male, age 51, unknown
67.8
2590
Female, age 75, unknown
62.4
1916
Female, age 42, unknown
61.6
2665
Male, age 74, both hemispheres
58.6
2583
Male, age 75, right hemisphere
51.0
1889
Female, age 72, unknown
43.8
1941
Male, age 53, unknown
42.9
2241
Male, age 72, unknown
33.5
2409
Female, age 72, unknown
32.3
Superior colliculus nTPM: 56.7
1796
Male, age 53, unknown
88.7
1995
Male, age 72, unknown
81.2
2587
Male, age 74, left hemisphere
59.1
2668
Female, age 75, unknown
58.8
1913
Female, age 42, unknown
58.7
2261
Male, age 18, unknown
54.5
2664
Male, age 75, both hemispheres
44.0
1839
Male, age 51, unknown
43.9
2087
Female, age 72, unknown
40.2
1895
Male, age 76, right hemisphere
38.4
Ventral tegmental area nTPM: 61.2
2021
Male, age 53, unknown
73.5
1915
Female, age 42, unknown
72.1
1942
Male, age 51, unknown
59.9
2223
Female, age 72, unknown
58.7
2218
Male, age 76, both hemispheres
58.0
2410
Female, age 72, unknown
45.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
37.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 37.7
Samples: 139
Max nTPM: 146.8
Min nTPM: 4.5
Std nTPM: 28.6
Median nTPM: 29.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
146.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
124.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
122.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
121.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
118.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
112.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
94.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
89.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
89.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
88.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
88.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
85.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
85.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
80.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
71.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
69.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
65.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
65.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
64.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
64.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
63.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
63.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
61.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
57.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
56.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
55.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
55.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
55.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
53.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
53.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
53.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
53.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
51.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
51.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
51.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
50.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
49.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
49.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
49.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
49.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
48.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
47.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
46.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
46.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
45.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
44.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
44.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
43.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
43.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
43.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
42.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
42.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
41.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
40.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
39.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
39.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
38.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
38.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
38.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
38.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
37.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
36.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
36.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
36.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
35.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
35.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
35.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
33.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
30.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
29.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
29.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
29.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
28.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
28.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
28.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
28.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
28.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
27.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
27.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
26.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
26.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
25.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
25.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
23.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
23.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
23.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
23.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
22.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
21.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
20.9
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
20.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
19.7
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
19.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
19.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
18.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
17.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
16.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
16.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
16.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
16.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
16.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
16.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
15.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
15.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
13.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
13.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
13.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
13.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
12.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
12.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
12.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
12.4
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
12.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
12.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
11.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
11.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
10.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
10.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
10.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
10.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
10.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
10.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
9.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
9.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
9.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
8.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
8.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
8.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
7.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
7.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
7.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
7.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
7.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
6.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
5.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
5.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
4.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
4.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
4.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
0.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 0.1
Samples: 4
Max nTPM: 0.2
Min nTPM: 0.0
Sample A
Male
0.1
Sample B
Male
0.0
Sample C
Female
0.0
Sample D
Female
0.2
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.