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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1642.1
nTPM
Monaco:
170.1
nTPM
Schmiedel:
315.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1642.1
HPA sample
nTPM
gdT-cell nTPM: 1120.1
Samples: 6
Max nTPM: 1281.6
Min nTPM: 833.7
P10809_1007
833.7
P10809_1022
1013.9
P10809_1041
1261.0
P10809_1060
1184.7
P10809_1077
1281.6
P10809_1098
1145.5
MAIT T-cell nTPM: 1226.4
Samples: 6
Max nTPM: 1459.4
Min nTPM: 635.2
P10809_1006
635.2
P10809_1024
1348.6
P10809_1043
1360.1
P10809_1062
1278.5
P10809_1083
1276.6
P10809_1097
1459.4
Memory CD4 T-cell nTPM: 1476.6
Samples: 6
Max nTPM: 1671.4
Min nTPM: 1037.2
P10809_1014
1037.2
P10809_1026
1671.4
P10809_1045
1507.7
P10809_1064
1591.5
P10809_1086
1517.1
P10809_1113
1534.6
Memory CD8 T-cell nTPM: 1363.0
Samples: 5
Max nTPM: 1576.8
Min nTPM: 874.6
P10809_1012
874.6
P10809_1027
1576.8
P10809_1046
1380.3
P10809_1065
1467.1
P10809_1111
1516.4
Naive CD4 T-cell nTPM: 1454.0
Samples: 6
Max nTPM: 1802.0
Min nTPM: 983.3
P10809_1015
983.3
P10809_1030
1728.6
P10809_1049
1802.0
P10809_1068
1436.0
P10809_1085
1377.6
P10809_1112
1396.4
Naive CD8 T-cell nTPM: 1398.2
Samples: 6
Max nTPM: 1648.2
Min nTPM: 1092.7
P10809_1016
1092.7
P10809_1031
1648.2
P10809_1050
1431.0
P10809_1069
1440.0
P10809_1087
1488.5
P10809_1110
1288.7
T-reg nTPM: 1642.1
Samples: 6
Max nTPM: 2233.5
Min nTPM: 942.5
P10809_1018
942.5
P10809_1037
1721.0
P10809_1056
2233.5
P10809_1075
1607.4
P10809_1094
1685.5
P10809_1106
1662.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
170.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 142.6
Samples: 4
Max nTPM: 228.7
Min nTPM: 87.1
RHH5202_R3573
87.1
RHH5230_R3602
136.3
RHH5259_R3631
228.7
RHH5288_R3660
118.3
Effector memory CD8 T-cell nTPM: 101.2
Samples: 4
Max nTPM: 174.5
Min nTPM: 74.8
RHH5203_R3574
77.6
RHH5231_R3603
74.8
RHH5260_R3632
174.5
RHH5289_R3661
78.0
MAIT T-cell nTPM: 101.9
Samples: 4
Max nTPM: 116.8
Min nTPM: 68.1
RHH5233_R3605
68.1
RHH5205_R3576
112.1
RHH5262_R3634
110.4
RHH5297_R3663
116.8
Memory CD4 T-cell TFH nTPM: 107.3
Samples: 4
Max nTPM: 156.2
Min nTPM: 74.7
RHH5300_R3666
108.2
RHH5236_R3608
156.2
RHH5265_R3637
74.7
RHH5208_R3579
89.9
Memory CD4 T-cell Th1 nTPM: 158.1
Samples: 4
Max nTPM: 273.3
Min nTPM: 54.7
RHH5210_R3581
54.7
RHH5302_R3668
126.7
RHH5238_R3610
273.3
RHH5267_R3639
177.8
Memory CD4 T-cell Th1/Th17 nTPM: 138.5
Samples: 4
Max nTPM: 189.6
Min nTPM: 82.9
RHH5303_R3669
97.9
RHH5211_R3582
82.9
RHH5239_R3611
183.6
RHH5268_R3640
189.6
Memory CD4 T-cell Th17 nTPM: 120.0
Samples: 4
Max nTPM: 161.0
Min nTPM: 82.9
RHH5304_R3670
161.0
RHH5212_R3583
82.9
RHH5240_R3612
117.6
RHH5269_R3641
118.6
Memory CD4 T-cell Th2 nTPM: 119.3
Samples: 4
Max nTPM: 161.5
Min nTPM: 77.0
RHH5305_R3671
161.5
RHH5213_R3584
108.5
RHH5241_R3613
77.0
RHH5270_R3642
130.1
Naive CD4 T-cell nTPM: 148.9
Samples: 4
Max nTPM: 178.8
Min nTPM: 106.3
RHH5306_R3672
176.5
RHH5214_R3585
178.8
RHH5242_R3614
106.3
RHH5271_R3643
134.0
Naive CD8 T-cell nTPM: 143.6
Samples: 4
Max nTPM: 208.1
Min nTPM: 94.7
RHH5201_R3572
97.7
RHH5229_R3601
208.1
RHH5258_R3630
94.7
RHH5287_R3659
174.0
Non-Vd2 gdTCR nTPM: 109.3
Samples: 4
Max nTPM: 152.6
Min nTPM: 77.9
RHH5235_R3607
152.6
RHH5264_R3636
124.4
RHH5207_R3578
82.3
RHH5299_R3665
77.9
T-reg nTPM: 126.1
Samples: 4
Max nTPM: 150.1
Min nTPM: 98.5
RHH5301_R3667
107.5
RHH5237_R3609
98.5
RHH5266_R3638
150.1
RHH5209_R3580
148.2
Terminal effector memory CD4 T-cell nTPM: 118.1
Samples: 2
Max nTPM: 150.6
Min nTPM: 85.6
RHH5243_R3615
150.6
RHH5272_R3644
85.6
Terminal effector memory CD8 T-cell nTPM: 145.5
Samples: 4
Max nTPM: 210.6
Min nTPM: 68.1
RHH5232_R3604
68.1
RHH5204_R3575
210.6
RHH5261_R3633
207.9
RHH5296_R3662
95.4
Vd2 gdTCR nTPM: 170.1
Samples: 4
Max nTPM: 247.4
Min nTPM: 106.0
RHH5234_R3606
106.0
RHH5206_R3577
247.4
RHH5263_R3635
177.5
RHH5298_R3664
149.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.