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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
294.5
nTPM
Monaco:
329.5
nTPM
Schmiedel:
800.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
294.5
HPA sample
nTPM
gdT-cell nTPM: 75.1
Samples: 6
Max nTPM: 112.1
Min nTPM: 48.9
P10809_1007
74.9
P10809_1022
66.4
P10809_1041
112.1
P10809_1060
76.4
P10809_1077
48.9
P10809_1098
72.1
MAIT T-cell nTPM: 45.5
Samples: 6
Max nTPM: 57.2
Min nTPM: 35.6
P10809_1006
57.2
P10809_1024
52.0
P10809_1043
42.1
P10809_1062
48.1
P10809_1083
35.6
P10809_1097
37.9
Memory CD4 T-cell nTPM: 206.3
Samples: 6
Max nTPM: 292.4
Min nTPM: 136.8
P10809_1014
194.7
P10809_1026
255.1
P10809_1045
145.4
P10809_1064
292.4
P10809_1086
136.8
P10809_1113
213.4
Memory CD8 T-cell nTPM: 90.4
Samples: 5
Max nTPM: 130.3
Min nTPM: 43.4
P10809_1012
125.5
P10809_1027
65.0
P10809_1046
88.0
P10809_1065
43.4
P10809_1111
130.3
Naive CD4 T-cell nTPM: 211.7
Samples: 6
Max nTPM: 251.4
Min nTPM: 158.7
P10809_1015
162.6
P10809_1030
242.2
P10809_1049
237.0
P10809_1068
218.1
P10809_1085
158.7
P10809_1112
251.4
Naive CD8 T-cell nTPM: 110.5
Samples: 6
Max nTPM: 150.7
Min nTPM: 76.9
P10809_1016
107.3
P10809_1031
120.8
P10809_1050
76.9
P10809_1069
107.3
P10809_1087
99.8
P10809_1110
150.7
T-reg nTPM: 294.5
Samples: 6
Max nTPM: 548.0
Min nTPM: 206.2
P10809_1018
210.8
P10809_1037
299.5
P10809_1056
206.2
P10809_1075
281.4
P10809_1094
220.8
P10809_1106
548.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
329.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 184.6
Samples: 4
Max nTPM: 269.1
Min nTPM: 127.7
RHH5202_R3573
192.6
RHH5230_R3602
148.8
RHH5259_R3631
127.7
RHH5288_R3660
269.1
Effector memory CD8 T-cell nTPM: 172.8
Samples: 4
Max nTPM: 241.6
Min nTPM: 110.5
RHH5203_R3574
110.5
RHH5231_R3603
209.7
RHH5260_R3632
241.6
RHH5289_R3661
129.5
MAIT T-cell nTPM: 62.5
Samples: 4
Max nTPM: 104.7
Min nTPM: 20.4
RHH5233_R3605
54.5
RHH5205_R3576
104.7
RHH5262_R3634
20.4
RHH5297_R3663
70.3
Memory CD4 T-cell TFH nTPM: 236.5
Samples: 4
Max nTPM: 410.6
Min nTPM: 140.0
RHH5300_R3666
140.0
RHH5236_R3608
197.2
RHH5265_R3637
198.0
RHH5208_R3579
410.6
Memory CD4 T-cell Th1 nTPM: 151.3
Samples: 4
Max nTPM: 209.3
Min nTPM: 91.5
RHH5210_R3581
158.4
RHH5302_R3668
145.8
RHH5238_R3610
91.5
RHH5267_R3639
209.3
Memory CD4 T-cell Th1/Th17 nTPM: 200.2
Samples: 4
Max nTPM: 249.4
Min nTPM: 89.0
RHH5303_R3669
234.9
RHH5211_R3582
227.4
RHH5239_R3611
249.4
RHH5268_R3640
89.0
Memory CD4 T-cell Th17 nTPM: 128.6
Samples: 4
Max nTPM: 214.7
Min nTPM: 92.0
RHH5304_R3670
101.1
RHH5212_R3583
106.5
RHH5240_R3612
92.0
RHH5269_R3641
214.7
Memory CD4 T-cell Th2 nTPM: 219.4
Samples: 4
Max nTPM: 401.9
Min nTPM: 115.5
RHH5305_R3671
115.5
RHH5213_R3584
146.4
RHH5241_R3613
401.9
RHH5270_R3642
213.9
Naive CD4 T-cell nTPM: 329.6
Samples: 4
Max nTPM: 392.4
Min nTPM: 245.2
RHH5306_R3672
392.4
RHH5214_R3585
344.6
RHH5242_R3614
336.0
RHH5271_R3643
245.2
Naive CD8 T-cell nTPM: 215.4
Samples: 4
Max nTPM: 306.0
Min nTPM: 94.0
RHH5201_R3572
226.1
RHH5229_R3601
306.0
RHH5258_R3630
94.0
RHH5287_R3659
235.5
Non-Vd2 gdTCR nTPM: 152.6
Samples: 4
Max nTPM: 260.2
Min nTPM: 61.9
RHH5235_R3607
61.9
RHH5264_R3636
219.8
RHH5207_R3578
68.6
RHH5299_R3665
260.2
T-reg nTPM: 238.4
Samples: 4
Max nTPM: 310.4
Min nTPM: 175.6
RHH5301_R3667
310.4
RHH5237_R3609
286.1
RHH5266_R3638
181.5
RHH5209_R3580
175.6
Terminal effector memory CD4 T-cell nTPM: 63.3
Samples: 2
Max nTPM: 115.1
Min nTPM: 11.4
RHH5243_R3615
115.1
RHH5272_R3644
11.4
Terminal effector memory CD8 T-cell nTPM: 172.2
Samples: 4
Max nTPM: 233.1
Min nTPM: 68.7
RHH5232_R3604
199.2
RHH5204_R3575
187.8
RHH5261_R3633
68.7
RHH5296_R3662
233.1
Vd2 gdTCR nTPM: 275.5
Samples: 4
Max nTPM: 422.1
Min nTPM: 165.2
RHH5234_R3606
165.2
RHH5206_R3577
327.6
RHH5263_R3635
187.0
RHH5298_R3664
422.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.