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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
59.7
nTPM
HPA Brain:
79.8
nTPM
GTEx:
59.7
nTPM
FANTOM5:
41.9
Scaled Tags Per Million
Pig:
35.6
nTPM
Mouse:
25.3
nTPM
Allen mouse:
4.1
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
79.8
Sample id
Sample description
nTPM
Amygdala nTPM: 66.3
2814
Male, age 76, right hemisphere
84.5
2695
Female, age 67, right hemisphere
74.3
2514
Male, age 75, right hemisphere
64.8
2517
Female, age 94, left hemisphere
58.9
1987
Female, age 91, left hemisphere
49.0
Basal amygdala nTPM: 61.3
2827
Female, age 67, right hemisphere
85.5
2609
Male, age 75, right hemisphere
63.3
1955
Male, age 76, both hemispheres
61.4
2110
Male, age 80, left hemisphere
59.8
2685
Female, age 94, left hemisphere
53.5
2243
Female, age 91, right hemisphere
44.5
Central amygdala nTPM: 66.8
1905
Male, age 76, both hemispheres
79.0
2826
Female, age 94, left hemisphere
68.7
2239
Male, age 80, left hemisphere
62.7
2515
Male, age 75, right hemisphere
62.6
2701
Female, age 91, right hemisphere
61.1
Corticomedial amygdala nTPM: 47.5
2535
Female, age 67, right hemisphere
66.8
2428
Male, age 75, right hemisphere
52.8
2429
Female, age 94, left hemisphere
45.2
2829
Male, age 80, left hemisphere
45.1
2240
Male, age 76, both hemispheres
40.2
2242
Female, age 91, right hemisphere
34.5
Lateral amygdala nTPM: 79.8
2830
Female, age 67, right hemisphere
102.2
2516
Male, age 75, right hemisphere
86.0
2534
Female, age 94, left hemisphere
76.5
1883
Male, age 76, both hemispheres
75.6
2256
Male, age 80, left hemisphere
73.1
2255
Female, age 91, right hemisphere
65.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
59.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 59.7
Samples: 152
Max nTPM: 141.0
Min nTPM: 10.6
Std nTPM: 28.0
Median nTPM: 53.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
141.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
133.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
128.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
123.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
118.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
116.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
116.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
113.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
111.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
109.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
109.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
109.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
104.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
101.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
99.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
98.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
98.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
98.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
98.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
97.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
97.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
95.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
95.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
95.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
94.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
92.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
90.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
90.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
88.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
85.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
84.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
84.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
82.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
82.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
80.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
77.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
77.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
77.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
76.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
76.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
76.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
74.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
74.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
73.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
73.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
73.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
71.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
71.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
70.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
70.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
69.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
68.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
66.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
66.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
66.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
65.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
64.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
64.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
63.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
62.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
62.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
62.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
62.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
61.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
60.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
60.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
59.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
59.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
58.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
57.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
56.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
56.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
55.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
54.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
54.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
54.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
52.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
51.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
51.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
50.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
50.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
50.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
49.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
49.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
47.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
47.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
47.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
46.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
45.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
44.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
44.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
43.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
43.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
43.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
43.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
42.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
42.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
41.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
41.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
41.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
41.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
40.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
40.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
40.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
39.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
39.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
39.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
39.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
39.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
38.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
38.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
38.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
37.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
37.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
37.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
37.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
36.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
36.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
36.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
35.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
35.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
34.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
34.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
32.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
32.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
32.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
32.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
31.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
31.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
31.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
31.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
31.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
31.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
31.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
30.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
30.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
29.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
29.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
29.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
29.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
29.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
28.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
27.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
27.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
26.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
25.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
24.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
24.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
23.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
23.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
17.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
10.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
25.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 25.3
Samples: 4
Max nTPM: 25.8
Min nTPM: 25.0
Sample A
Male
25.2
Sample B
Male
25.8
Sample C
Female
25.3
Sample D
Female
25.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
