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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:49.5 nTPM
HPA Brain:79.3 nTPM
GTEx:49.5 nTPM
Pig:50.9 nTPM
Mouse:23.4 nTPM
Allen mouse:2.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 25.3
2226 Male, age 75, left hemisphere 27.8
1961 Female, age 42, unknown 22.8
Dorsomedial nucleus
nTPM: 47.8
2017 Female, age 42, unknown 68.8
1989 Male, age 62, unknown 51.3
2041 Female, age 72, unknown 23.3
Lateral hypothalamic area
nTPM: 50.6
2271 Male, age 75, both hemispheres 57.4
2228 Male, age 66, unknown 53.4
1791 Male, age 80, right hemisphere 48.2
2412 Male, age 62, unknown 43.4
Mammillary body
nTPM: 79.3
1945 Male, age 80, right hemisphere 97.2
1948 Female, age 72, unknown 88.4
1834 Female, age 42, unknown 84.7
1923 Female, age 72, unknown 64.9
2413 Male, age 66, unknown 61.6
Paraventricular nucleus
nTPM: 64.5
2700 Male, age 62, unknown 64.5
Preoptic area
nTPM: 61.8
2414 Female, age 72, unknown 90.4
1861 Female, age 42, unknown 68.2
1907 Male, age 80, right hemisphere 26.7
Supraoptic nucleus
nTPM: 50.9
2043 Male, age 62, unknown 63.1
1894 Female, age 72, unknown 46.0
2835 Female, age 72, unknown 43.6
Ventromedial nucleus
nTPM: 23.7
1982 Female, age 72, unknown 26.9
1822 Female, age 42, unknown 20.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 49.5
Samples: 257

Max nTPM: 179.7
Min nTPM: 3.9
Std nTPM: 30.4
Median nTPM: 41.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 179.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 161.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 157.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 144.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 140.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 137.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 132.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 126.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 120.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 117.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 117.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 110.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 109.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 109.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 107.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 106.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 102.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 100.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 98.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 95.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 94.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 94.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 91.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 91.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 91.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 90.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 88.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 87.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 87.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 85.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 83.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 82.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 82.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 81.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 81.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 80.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 79.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 79.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 78.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 78.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 78.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 78.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 77.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 76.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 76.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 75.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 75.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 72.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 71.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 70.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 69.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 68.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 67.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 67.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 66.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 66.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 66.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 66.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 65.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 65.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 65.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 65.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 63.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 63.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 63.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 63.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 62.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 62.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 62.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 61.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 61.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 61.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 61.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 61.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 60.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 60.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 60.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 59.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 59.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 58.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 58.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 57.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 57.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 57.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 57.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 56.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 56.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 55.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 54.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 53.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 52.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 52.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 52.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 52.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 52.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 51.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 51.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 51.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 51.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 51.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 50.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 50.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 50.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 50.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 49.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 49.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 49.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 49.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 48.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 48.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 48.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 48.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 48.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 47.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 46.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 46.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 46.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 45.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 45.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 45.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 44.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 44.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 44.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 43.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 42.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 42.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 41.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 41.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 41.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 41.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 41.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 41.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 41.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 40.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 40.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 40.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 40.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 40.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 40.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 39.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 39.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 39.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 39.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 39.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 38.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 38.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 37.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 37.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 36.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 36.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 36.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 36.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 36.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 35.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 35.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 35.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 35.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 35.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 35.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 34.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 34.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 34.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 34.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 34.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 33.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 33.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 33.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 33.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 33.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 33.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 32.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 31.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 31.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 31.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 31.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 31.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 31.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 30.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 30.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 30.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 30.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 30.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 30.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 29.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 29.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 29.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 29.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 29.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 28.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 28.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 28.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 28.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 28.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 27.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 27.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 27.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 26.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 26.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 26.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 26.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 25.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 25.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 25.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 25.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 25.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 25.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 24.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 24.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 23.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 23.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 23.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 22.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 22.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 22.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 22.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 22.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 22.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 21.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 20.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 20.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 20.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 20.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 20.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 19.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 19.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 19.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 18.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 18.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 18.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 18.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 18.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 17.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 17.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 17.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 17.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 16.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 16.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 15.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 15.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 15.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 15.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 15.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 14.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 13.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 13.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 13.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 13.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 12.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 12.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 12.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 12.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 11.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 10.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 8.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 7.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 6.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 3.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 51.0
Samples: 4

Max nTPM: 67.8
Min nTPM: 28.0
Sample A Female 67.8
Sample B Female 56.2
Sample C Male 51.8
Sample D Male 28.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 23.4
Samples: 4

Max nTPM: 25.3
Min nTPM: 21.7
Sample A Male 22.5
Sample B Male 21.7
Sample C Female 24.2
Sample D Female 25.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.0
74988736 Antisense, RP_060315_04_B04, Mouse strain C57BL/6J (56 days, male) 2.2
70593371 Antisense, RP_050407_04_B08, Mouse strain C57BL/6J (56 days, male) 1.7

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