HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:298.8 nTPM
HPA Brain:1088.0 nTPM
GTEx:298.8 nTPM
FANTOM5:1098.4 Scaled Tags Per Million
Pig:179.7 nTPM
Mouse:339.5 nTPM
Allen mouse:12.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA078003
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 1088.0
Sample id Sample description nTPM
Hippocampus
nTPM: 974.1
2621 Female, age 67, right hemisphere 1215.1
1898 Male, age 80, left hemisphere 1031.3
2148 Female, age 91, left hemisphere 1002.1
1855 Male, age 76, left hemisphere 873.4
2529 Female, age 94, left hemisphere 864.2
1911 Female, age 85, right hemisphere 858.5
Dentate gyrus
nTPM: 914.1
2531 Female, age 67, both hemispheres 1187.1
1927 Female, age 91, both hemispheres 1172.1
2010 Male, age 76, both hemispheres 833.7
2530 Female, age 94, left hemisphere 795.6
2246 Female, age 85, both hemispheres 762.8
2528 Male, age 74, both hemispheres 733.4
Entorhinal gyrus
nTPM: 818.2
2613 Female, age 94, left hemisphere 1015.6
1938 Female, age 85, left hemisphere 863.4
2764 Male, age 80, right hemisphere 820.6
2686 Male, age 75, right hemisphere 812.8
1787 Male, age 76, left hemisphere 784.5
2117 Female, age 91, right hemisphere 612.3
Hippocampus, CA1
nTPM: 1088.0
2749 Male, age 80, left hemisphere 1682.0
2527 Male, age 74, both hemispheres 1124.8
2045 Male, age 76, both hemispheres 939.8
1873 Female, age 85, both hemispheres 899.9
2082 Female, age 91, right hemisphere 793.4
Hippocampus, CA2
nTPM: 918.9
1963 Male, age 80, left hemisphere 1612.5
1892 Male, age 76, both hemispheres 965.6
2113 Female, age 91, right hemisphere 907.1
2437 Female, age 94, left hemisphere 767.0
2249 Male, age 74, both hemispheres 635.5
1940 Female, age 85, left hemisphere 625.5
Hippocampus, CA3
nTPM: 1087.0
2137 Male, age 80, left hemisphere 1730.7
2861 Female, age 67, both hemispheres 1359.0
2620 Female, age 94, left hemisphere 1063.7
1867 Male, age 76, both hemispheres 936.4
1891 Female, age 85, both hemispheres 717.8
2436 Male, age 74, both hemispheres 714.3
Parahippocampal cortex
nTPM: 849.9
2245 Female, age 91, both hemispheres 1212.7
2018 Male, age 76, both hemispheres 917.7
2693 Female, age 94, both hemispheres 884.1
1850 Male, age 80, both hemispheres 852.6
2622 Female, age 67, right hemisphere 846.7
2250 Female, age 67, right hemisphere 830.9
1933 Female, age 85, both hemispheres 770.0
1990 Female, age 91, right hemisphere 740.9
2532 Female, age 72, left hemisphere 736.9
2692 Male, age 74, both hemispheres 706.5
Perirhinal gyrus
nTPM: 976.0
1847 Female, age 91, left hemisphere 1137.1
2521 Female, age 94, right hemisphere 1075.3
1794 Male, age 80, right hemisphere 978.1
2848 Male, age 76, right hemisphere 848.0
1841 Female, age 85, right hemisphere 841.7
Subiculum
nTPM: 704.1
1901 Male, age 80, both hemispheres 824.4
1977 Female, age 85, both hemispheres 779.3
2729 Female, age 91, right hemisphere 721.5
2619 Male, age 74, both hemispheres 673.7
2042 Male, age 76, both hemispheres 637.3
2438 Female, age 94, left hemisphere 588.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 298.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 298.8
Samples: 255

Max nTPM: 992.2
Min nTPM: 47.3
Std nTPM: 181.2
Median nTPM: 259.9
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 992.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 954.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 846.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 826.5
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 793.9
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 750.5
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 741.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 736.4
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 720.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 715.6
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 698.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1098.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1098.4
FF:10169-103B7 60 years, female 1304.4
FF:10153-102I9 76 years, female 892.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 179.7
Pig sample Sample description nTPM
Subiculum
nTPM: 139.6
Samples: 4

Max nTPM: 183.5
Min nTPM: 111.6
Sample A Female 183.5
Sample B Female 120.8
Sample C Male 142.6
Sample D Male 111.6
Dorsal hippocampus
nTPM: 169.8
Samples: 4

Max nTPM: 201.1
Min nTPM: 133.9
Sample A Female 201.1
Sample B Female 183.7
Sample C Male 133.9
Sample D Male 160.3
Entorhinal cortex
nTPM: 137.8
Samples: 4

Max nTPM: 153.1
Min nTPM: 119.0
Sample A Female 153.1
Sample B Female 119.0
Sample C Male 151.0
Sample D Male 128.1
Ventral hippocampus
nTPM: 179.7
Samples: 4

Max nTPM: 231.9
Min nTPM: 126.1
Sample A Female 179.9
Sample B Female 126.1
Sample C Male 231.9
Sample D Male 180.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 339.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 339.5
Samples: 4

Max nTPM: 421.6
Min nTPM: 302.4
Sample A Male 312.4
Sample B Male 302.4
Sample C Female 321.4
Sample D Female 421.6
Hippocampal formation
nTPM: 250.6
Samples: 4

Max nTPM: 284.3
Min nTPM: 225.9
Sample A Male 284.3
Sample B Male 249.5
Sample C Female 242.8
Sample D Female 225.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.9
73994671 Antisense, RP_051214_03_E06, Mouse strain C57BL/6J (56 days, male) 15.4
69735222 Antisense, RP_050503_02_C12, Mouse strain C57BL/6J (56 days, male) 10.4

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