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  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:144.3 nTPM
HPA Brain:486.4 nTPM
GTEx:144.3 nTPM
Pig:92.8 nTPM
Mouse:291.3 nTPM
Allen mouse:11.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

486.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 471.9
2226 Male, age 75, left hemisphere 513.9
1961 Female, age 42, unknown 429.9
Dorsomedial nucleus
nTPM: 396.1
1989 Male, age 62, unknown 470.9
2017 Female, age 42, unknown 386.8
2041 Female, age 72, unknown 330.7
Lateral hypothalamic area
nTPM: 480.8
2271 Male, age 75, both hemispheres 524.8
1791 Male, age 80, right hemisphere 524.1
2412 Male, age 62, unknown 451.8
2228 Male, age 66, unknown 422.6
Mammillary body
nTPM: 378.7
1923 Female, age 72, unknown 438.4
2413 Male, age 66, unknown 392.8
1948 Female, age 72, unknown 371.2
1834 Female, age 42, unknown 345.7
1945 Male, age 80, right hemisphere 345.3
Paraventricular nucleus
nTPM: 367.4
2700 Male, age 62, unknown 367.4
Preoptic area
nTPM: 384.1
1907 Male, age 80, right hemisphere 441.4
1861 Female, age 42, unknown 385.7
2414 Female, age 72, unknown 325.0
Supraoptic nucleus
nTPM: 320.9
2835 Female, age 72, unknown 409.9
1894 Female, age 72, unknown 278.1
2043 Male, age 62, unknown 274.7
Ventromedial nucleus
nTPM: 486.4
1982 Female, age 72, unknown 553.4
1822 Female, age 42, unknown 419.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

144.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 144.3
Samples: 257

Max nTPM: 591.6
Min nTPM: 55.5
Std nTPM: 66.3
Median nTPM: 124.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 591.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 479.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 444.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 402.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 337.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 332.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 300.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 298.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 274.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 272.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 259.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 254.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 250.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 244.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 243.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 243.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 242.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 239.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 239.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 235.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 233.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 229.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 227.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 217.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 214.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 214.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 213.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 211.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 209.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 209.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 205.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 204.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 204.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 204.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 203.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 200.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 198.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 197.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 195.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 193.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 193.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 193.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 192.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 186.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 182.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 181.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 180.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 180.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 180.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 179.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 179.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 177.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 176.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 176.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 175.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 175.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 174.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 172.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 172.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 172.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 171.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 170.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 169.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 168.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 168.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 168.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 167.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 167.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 165.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 165.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 165.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 164.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 164.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 164.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 162.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 160.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 160.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 160.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 160.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 159.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 159.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 157.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 157.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 157.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 156.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 153.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 152.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 152.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 152.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 152.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 150.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 150.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 149.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 149.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 147.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 146.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 145.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 144.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 143.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 143.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 143.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 141.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 140.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 140.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 139.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 138.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 138.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 137.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 137.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 135.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 134.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 134.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 132.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 132.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 132.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 132.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 131.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 131.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 130.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 130.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 128.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 127.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 127.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 125.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 125.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 125.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 125.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 124.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 124.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 124.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 124.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 123.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 123.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 123.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 122.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 122.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 122.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 122.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 122.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 121.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 121.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 120.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 120.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 120.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 120.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 120.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 120.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 120.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 119.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 119.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 119.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 118.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 118.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 118.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 118.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 118.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 117.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 117.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 117.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 115.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 115.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 114.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 114.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 114.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 113.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 113.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 112.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 112.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 112.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 112.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 111.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 111.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 111.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 110.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 110.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 109.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 108.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 108.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 108.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 108.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 108.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 108.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 108.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 107.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 107.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 107.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 107.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 106.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 106.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 106.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 106.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 105.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 105.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 104.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 103.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 103.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 102.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 102.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 102.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 101.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 101.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 100.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 100.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 100.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 99.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 97.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 97.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 97.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 96.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 95.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 95.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 94.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 94.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 94.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 94.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 93.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 93.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 93.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 92.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 92.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 92.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 92.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 92.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 91.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 91.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 91.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 90.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 90.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 89.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 89.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 89.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 88.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 87.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 86.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 85.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 84.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 83.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 83.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 83.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 82.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 81.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 81.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 79.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 77.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 73.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 73.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 71.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 71.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 70.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 66.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 63.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 63.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 61.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 59.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 56.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 55.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 55.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 92.8
Samples: 4

Max nTPM: 117.0
Min nTPM: 65.2
Sample A Female 117.0
Sample B Female 96.4
Sample C Male 92.7
Sample D Male 65.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

291.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 291.3
Samples: 4

Max nTPM: 308.8
Min nTPM: 272.8
Sample A Male 285.9
Sample B Male 297.7
Sample C Female 308.8
Sample D Female 272.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.4
73994671 Antisense, RP_051214_03_E06, Mouse strain C57BL/6J (56 days, male) 13.0
69735222 Antisense, RP_050503_02_C12, Mouse strain C57BL/6J (56 days, male) 9.7

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