HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:40.8 nTPM
HPA Brain:216.7 nTPM
GTEx:40.8 nTPM
FANTOM5:94.5 Scaled Tags Per Million
Pig:128.1 nTPM
Mouse:183.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035630Antibody CAB020699
Glial cells MediumNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 216.7
Sample id Sample description nTPM
Hippocampus
nTPM: 166.8
1898 Male, age 80, left hemisphere 207.9
2148 Female, age 91, left hemisphere 173.8
1855 Male, age 76, left hemisphere 172.0
2621 Female, age 67, right hemisphere 161.5
2529 Female, age 94, left hemisphere 146.3
1911 Female, age 85, right hemisphere 139.3
Dentate gyrus
nTPM: 170.1
1927 Female, age 91, both hemispheres 189.6
2528 Male, age 74, both hemispheres 179.4
2246 Female, age 85, both hemispheres 169.9
2531 Female, age 67, both hemispheres 167.4
2010 Male, age 76, both hemispheres 159.2
2530 Female, age 94, left hemisphere 155.1
Entorhinal gyrus
nTPM: 174.8
2764 Male, age 80, right hemisphere 214.0
1938 Female, age 85, left hemisphere 192.2
2613 Female, age 94, left hemisphere 182.4
1787 Male, age 76, left hemisphere 173.2
2117 Female, age 91, right hemisphere 155.9
2686 Male, age 75, right hemisphere 131.2
Hippocampus, CA1
nTPM: 200.0
2749 Male, age 80, left hemisphere 282.5
2045 Male, age 76, both hemispheres 189.0
1873 Female, age 85, both hemispheres 182.3
2082 Female, age 91, right hemisphere 173.9
2527 Male, age 74, both hemispheres 172.5
Hippocampus, CA2
nTPM: 171.9
1963 Male, age 80, left hemisphere 212.6
1892 Male, age 76, both hemispheres 193.3
2113 Female, age 91, right hemisphere 164.7
2249 Male, age 74, both hemispheres 159.4
1940 Female, age 85, left hemisphere 153.7
2437 Female, age 94, left hemisphere 147.4
Hippocampus, CA3
nTPM: 183.0
2137 Male, age 80, left hemisphere 252.9
2620 Female, age 94, left hemisphere 206.1
1867 Male, age 76, both hemispheres 169.9
2861 Female, age 67, both hemispheres 169.1
1891 Female, age 85, both hemispheres 161.4
2436 Male, age 74, both hemispheres 139.0
Parahippocampal cortex
nTPM: 170.2
1850 Male, age 80, both hemispheres 225.5
2532 Female, age 72, left hemisphere 183.3
2245 Female, age 91, both hemispheres 183.2
1990 Female, age 91, right hemisphere 181.4
1933 Female, age 85, both hemispheres 181.3
2693 Female, age 94, both hemispheres 169.3
2250 Female, age 67, right hemisphere 168.1
2692 Male, age 74, both hemispheres 140.8
2018 Male, age 76, both hemispheres 137.7
2622 Female, age 67, right hemisphere 131.2
Perirhinal gyrus
nTPM: 216.7
1847 Female, age 91, left hemisphere 243.4
1794 Male, age 80, right hemisphere 242.8
2521 Female, age 94, right hemisphere 215.2
1841 Female, age 85, right hemisphere 201.3
2848 Male, age 76, right hemisphere 180.7
Subiculum
nTPM: 162.2
1977 Female, age 85, both hemispheres 193.5
1901 Male, age 80, both hemispheres 189.0
2729 Female, age 91, right hemisphere 164.4
2438 Female, age 94, left hemisphere 152.4
2619 Male, age 74, both hemispheres 143.9
2042 Male, age 76, both hemispheres 129.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 40.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.8
Samples: 255

Max nTPM: 77.1
Min nTPM: 16.4
Std nTPM: 11.0
Median nTPM: 38.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 77.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 76.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 74.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 72.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 71.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 68.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 68.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 63.6
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 61.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 61.7
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 61.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 94.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.5
FF:10169-103B7 60 years, female 97.6
FF:10153-102I9 76 years, female 91.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 128.1
Pig sample Sample description nTPM
Subiculum
nTPM: 115.5
Samples: 4

Max nTPM: 155.3
Min nTPM: 88.5
Sample A Female 155.3
Sample B Female 104.4
Sample C Male 113.7
Sample D Male 88.5
Dorsal hippocampus
nTPM: 126.9
Samples: 4

Max nTPM: 177.6
Min nTPM: 86.1
Sample A Female 177.6
Sample B Female 145.4
Sample C Male 98.3
Sample D Male 86.1
Entorhinal cortex
nTPM: 106.9
Samples: 4

Max nTPM: 122.8
Min nTPM: 93.1
Sample A Female 122.8
Sample B Female 93.1
Sample C Male 118.1
Sample D Male 93.6
Ventral hippocampus
nTPM: 128.1
Samples: 4

Max nTPM: 155.1
Min nTPM: 82.7
Sample A Female 146.4
Sample B Female 82.7
Sample C Male 155.1
Sample D Male 128.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 183.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 183.0
Samples: 4

Max nTPM: 232.9
Min nTPM: 157.4
Sample A Male 170.9
Sample B Male 170.6
Sample C Female 157.4
Sample D Female 232.9
Hippocampal formation
nTPM: 173.1
Samples: 4

Max nTPM: 201.7
Min nTPM: 143.8
Sample A Male 143.8
Sample B Male 183.6
Sample C Female 201.7
Sample D Female 163.1

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