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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:207.7 nTPM
HPA Brain:293.8 nTPM
GTEx:207.7 nTPM
Pig:303.1 nTPM
Mouse:166.1 nTPM
Allen mouse:1.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

293.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 165.3
2226 Male, age 75, left hemisphere 194.9
1961 Female, age 42, unknown 135.7
Dorsomedial nucleus
nTPM: 186.5
2041 Female, age 72, unknown 203.4
1989 Male, age 62, unknown 180.9
2017 Female, age 42, unknown 175.2
Lateral hypothalamic area
nTPM: 213.4
2271 Male, age 75, both hemispheres 245.9
1791 Male, age 80, right hemisphere 231.0
2228 Male, age 66, unknown 188.9
2412 Male, age 62, unknown 187.6
Mammillary body
nTPM: 237.4
1945 Male, age 80, right hemisphere 252.8
1834 Female, age 42, unknown 249.8
2413 Male, age 66, unknown 232.9
1923 Female, age 72, unknown 231.3
1948 Female, age 72, unknown 220.2
Paraventricular nucleus
nTPM: 192.6
2700 Male, age 62, unknown 192.6
Preoptic area
nTPM: 182.5
2414 Female, age 72, unknown 205.8
1861 Female, age 42, unknown 181.6
1907 Male, age 80, right hemisphere 160.2
Supraoptic nucleus
nTPM: 293.8
2043 Male, age 62, unknown 357.2
1894 Female, age 72, unknown 312.0
2835 Female, age 72, unknown 212.3
Ventromedial nucleus
nTPM: 151.8
1822 Female, age 42, unknown 158.5
1982 Female, age 72, unknown 145.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

207.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 207.7
Samples: 257

Max nTPM: 389.0
Min nTPM: 122.5
Std nTPM: 52.7
Median nTPM: 196.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 389.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 379.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 368.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 360.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 357.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 352.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 351.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 351.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 347.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 324.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 319.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 318.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 316.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 312.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 309.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 309.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 305.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 304.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 302.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 298.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 294.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 290.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 289.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 289.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 289.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 288.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 287.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 287.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 273.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 271.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 271.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 266.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 266.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 265.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 264.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 261.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 261.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 260.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 259.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 258.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 257.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 255.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 253.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 253.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 251.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 251.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 251.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 249.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 249.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 248.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 248.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 247.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 246.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 245.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 243.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 240.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 240.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 239.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 239.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 239.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 238.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 238.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 234.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 234.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 234.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 233.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 233.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 233.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 230.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 229.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 228.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 228.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 224.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 223.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 222.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 222.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 222.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 222.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 221.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 221.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 220.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 220.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 220.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 219.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 218.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 217.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 217.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 217.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 216.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 216.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 215.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 214.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 213.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 212.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 211.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 210.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 210.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 210.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 209.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 209.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 208.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 208.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 207.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 207.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 207.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 206.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 205.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 205.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 204.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 204.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 204.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 203.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 203.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 203.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 203.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 202.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 201.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 201.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 201.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 201.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 200.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 200.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 200.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 199.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 199.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 198.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 197.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 196.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 196.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 196.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 195.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 195.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 195.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 194.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 194.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 193.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 193.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 192.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 192.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 192.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 192.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 192.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 191.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 191.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 190.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 190.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 190.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 189.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 189.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 189.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 189.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 189.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 188.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 188.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 187.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 187.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 185.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 185.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 185.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 185.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 184.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 184.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 184.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 183.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 183.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 182.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 182.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 181.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 181.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 181.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 180.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 180.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 180.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 180.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 179.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 178.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 177.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 177.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 176.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 175.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 173.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 173.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 173.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 172.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 171.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 171.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 171.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 170.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 170.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 168.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 167.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 167.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 166.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 166.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 166.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 165.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 165.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 164.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 163.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 163.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 162.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 162.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 161.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 161.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 160.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 160.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 160.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 160.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 160.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 159.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 159.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 159.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 158.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 158.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 158.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 158.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 158.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 157.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 157.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 157.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 156.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 156.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 155.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 155.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 154.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 154.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 153.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 152.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 152.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 152.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 152.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 151.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 151.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 151.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 151.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 150.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 150.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 149.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 149.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 149.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 148.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 147.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 147.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 145.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 145.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 144.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 143.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 140.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 139.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 137.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 137.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 135.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 133.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 133.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 132.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 123.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 122.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

303.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 303.1
Samples: 4

Max nTPM: 375.3
Min nTPM: 224.9
Sample A Female 375.3
Sample B Female 323.6
Sample C Male 288.5
Sample D Male 224.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

166.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 166.1
Samples: 4

Max nTPM: 171.6
Min nTPM: 154.9
Sample A Male 154.9
Sample B Male 170.8
Sample C Female 171.6
Sample D Female 167.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.1
73606534 Antisense, RP_051130_01_B05, Mouse strain C57BL/6J (56 days, male) 1.1

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