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RAB7A
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  • TISSUE

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  • RAB7A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:149.9 nTPM
HPA Brain:201.4 nTPM
GTEx:149.9 nTPM
Pig:267.4 nTPM
Mouse:288.0 nTPM
Allen mouse:11.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

201.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 168.9
2226 Male, age 75, left hemisphere 212.6
1961 Female, age 42, unknown 125.2
Dorsomedial nucleus
nTPM: 149.3
1989 Male, age 62, unknown 166.6
2041 Female, age 72, unknown 154.7
2017 Female, age 42, unknown 126.4
Lateral hypothalamic area
nTPM: 201.4
2271 Male, age 75, both hemispheres 269.8
2228 Male, age 66, unknown 195.6
1791 Male, age 80, right hemisphere 192.3
2412 Male, age 62, unknown 148.1
Mammillary body
nTPM: 188.6
1923 Female, age 72, unknown 207.5
2413 Male, age 66, unknown 193.3
1834 Female, age 42, unknown 193.2
1945 Male, age 80, right hemisphere 175.7
1948 Female, age 72, unknown 173.4
Paraventricular nucleus
nTPM: 185.8
2700 Male, age 62, unknown 185.8
Preoptic area
nTPM: 159.1
2414 Female, age 72, unknown 172.4
1907 Male, age 80, right hemisphere 155.4
1861 Female, age 42, unknown 149.3
Supraoptic nucleus
nTPM: 181.1
2043 Male, age 62, unknown 192.9
1894 Female, age 72, unknown 192.5
2835 Female, age 72, unknown 158.1
Ventromedial nucleus
nTPM: 135.0
1982 Female, age 72, unknown 139.0
1822 Female, age 42, unknown 131.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

149.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 149.9
Samples: 257

Max nTPM: 252.8
Min nTPM: 67.7
Std nTPM: 22.1
Median nTPM: 147.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 252.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 226.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 221.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 221.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 211.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 204.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 204.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 201.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 201.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 200.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 198.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 195.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 192.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 191.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 190.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 190.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 189.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 183.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 183.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 181.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 180.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 179.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 179.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 179.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 178.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 177.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 177.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 176.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 176.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 175.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 175.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 174.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 173.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 172.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 172.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 170.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 170.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 169.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 169.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 167.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 167.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 166.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 166.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 165.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 165.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 164.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 164.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 164.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 163.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 163.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 162.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 162.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 161.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 161.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 161.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 161.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 160.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 160.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 160.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 159.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 159.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 158.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 158.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 158.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 158.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 158.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 157.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 157.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 157.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 157.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 157.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 157.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 156.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 156.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 156.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 156.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 155.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 155.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 155.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 155.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 155.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 154.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 154.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 154.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 154.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 154.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 154.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 153.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 153.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 153.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 153.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 153.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 153.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 153.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 152.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 152.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 152.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 152.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 151.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 151.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 151.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 151.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 150.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 150.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 150.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 150.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 150.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 150.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 150.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 150.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 150.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 150.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 150.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 150.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 149.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 149.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 149.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 149.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 149.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 148.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 148.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 148.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 148.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 148.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 148.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 148.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 148.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 148.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 147.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 147.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 147.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 147.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 147.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 146.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 146.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 146.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 146.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 145.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 145.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 144.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 144.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 144.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 144.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 144.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 144.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 144.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 144.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 144.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 143.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 143.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 143.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 143.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 143.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 142.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 142.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 142.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 142.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 142.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 141.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 141.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 141.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 141.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 140.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 140.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 140.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 140.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 140.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 140.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 140.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 139.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 139.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 139.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 139.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 139.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 139.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 138.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 138.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 138.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 138.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 138.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 138.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 138.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 138.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 138.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 138.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 137.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 137.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 137.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 137.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 137.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 136.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 136.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 136.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 136.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 136.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 136.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 136.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 136.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 136.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 136.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 135.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 135.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 135.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 135.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 135.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 135.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 134.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 134.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 134.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 134.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 134.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 133.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 133.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 132.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 132.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 132.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 132.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 132.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 131.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 131.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 131.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 131.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 131.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 130.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 130.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 129.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 129.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 129.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 129.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 128.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 127.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 127.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 126.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 126.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 126.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 125.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 125.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 125.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 125.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 124.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 124.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 123.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 123.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 121.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 121.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 120.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 119.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 118.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 118.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 117.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 116.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 115.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 114.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 113.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 101.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 81.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 67.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

267.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 267.4
Samples: 4

Max nTPM: 321.5
Min nTPM: 197.8
Sample A Female 321.5
Sample B Female 280.1
Sample C Male 270.1
Sample D Male 197.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

288.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 288.0
Samples: 4

Max nTPM: 298.8
Min nTPM: 269.5
Sample A Male 269.5
Sample B Male 294.9
Sample C Female 298.8
Sample D Female 288.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.8
532633 Antisense, RP_040810_02_G08, Mouse strain C57BL/6J (56 days, male) 11.8

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