HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:142.3 nTPM
HPA Brain:132.1 nTPM
GTEx:142.3 nTPM
FANTOM5:96.3 Scaled Tags Per Million
Pig:141.4 nTPM
Mouse:334.0 nTPM
Allen mouse:16.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031531
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 132.1
Sample id Sample description nTPM
Hippocampus
nTPM: 117.4
1855 Male, age 76, left hemisphere 138.1
1898 Male, age 80, left hemisphere 134.8
2621 Female, age 67, right hemisphere 123.5
1911 Female, age 85, right hemisphere 106.5
2148 Female, age 91, left hemisphere 103.3
2529 Female, age 94, left hemisphere 98.4
Dentate gyrus
nTPM: 106.9
2010 Male, age 76, both hemispheres 128.8
1927 Female, age 91, both hemispheres 126.3
2530 Female, age 94, left hemisphere 109.1
2246 Female, age 85, both hemispheres 100.2
2528 Male, age 74, both hemispheres 94.8
2531 Female, age 67, both hemispheres 82.0
Entorhinal gyrus
nTPM: 96.9
1938 Female, age 85, left hemisphere 111.5
2764 Male, age 80, right hemisphere 104.4
1787 Male, age 76, left hemisphere 101.6
2117 Female, age 91, right hemisphere 96.3
2613 Female, age 94, left hemisphere 88.0
2686 Male, age 75, right hemisphere 79.7
Hippocampus, CA1
nTPM: 132.1
2749 Male, age 80, left hemisphere 214.0
1873 Female, age 85, both hemispheres 136.7
2045 Male, age 76, both hemispheres 110.3
2527 Male, age 74, both hemispheres 101.1
2082 Female, age 91, right hemisphere 98.6
Hippocampus, CA2
nTPM: 116.4
1963 Male, age 80, left hemisphere 145.3
1892 Male, age 76, both hemispheres 145.2
2249 Male, age 74, both hemispheres 108.2
1940 Female, age 85, left hemisphere 106.7
2113 Female, age 91, right hemisphere 97.6
2437 Female, age 94, left hemisphere 95.1
Hippocampus, CA3
nTPM: 113.1
2137 Male, age 80, left hemisphere 159.1
1867 Male, age 76, both hemispheres 133.3
2436 Male, age 74, both hemispheres 106.1
1891 Female, age 85, both hemispheres 96.5
2620 Female, age 94, left hemisphere 93.4
2861 Female, age 67, both hemispheres 90.3
Parahippocampal cortex
nTPM: 99.0
2250 Female, age 67, right hemisphere 116.2
1850 Male, age 80, both hemispheres 111.4
2245 Female, age 91, both hemispheres 109.7
2018 Male, age 76, both hemispheres 106.3
1933 Female, age 85, both hemispheres 98.8
1990 Female, age 91, right hemisphere 97.0
2532 Female, age 72, left hemisphere 94.8
2693 Female, age 94, both hemispheres 86.8
2692 Male, age 74, both hemispheres 86.0
2622 Female, age 67, right hemisphere 82.8
Perirhinal gyrus
nTPM: 111.0
1847 Female, age 91, left hemisphere 125.4
1794 Male, age 80, right hemisphere 116.1
1841 Female, age 85, right hemisphere 108.4
2521 Female, age 94, right hemisphere 103.1
2848 Male, age 76, right hemisphere 101.8
Subiculum
nTPM: 100.9
1901 Male, age 80, both hemispheres 117.3
2042 Male, age 76, both hemispheres 103.7
1977 Female, age 85, both hemispheres 100.9
2729 Female, age 91, right hemisphere 95.6
2438 Female, age 94, left hemisphere 94.0
2619 Male, age 74, both hemispheres 93.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 142.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 142.3
Samples: 255

Max nTPM: 251.4
Min nTPM: 88.3
Std nTPM: 31.6
Median nTPM: 136.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 251.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 250.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 238.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 234.0
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 230.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 221.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 216.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 214.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 212.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 211.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 210.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 96.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 96.3
FF:10153-102I9 76 years, female 99.3
FF:10169-103B7 60 years, female 93.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 141.4
Pig sample Sample description nTPM
Subiculum
nTPM: 108.5
Samples: 4

Max nTPM: 127.7
Min nTPM: 93.5
Sample A Female 127.7
Sample B Female 93.5
Sample C Male 105.0
Sample D Male 107.7
Dorsal hippocampus
nTPM: 141.4
Samples: 4

Max nTPM: 181.6
Min nTPM: 112.7
Sample A Female 181.6
Sample B Female 139.2
Sample C Male 112.7
Sample D Male 132.1
Entorhinal cortex
nTPM: 94.1
Samples: 4

Max nTPM: 108.5
Min nTPM: 83.4
Sample A Female 108.5
Sample B Female 92.9
Sample C Male 91.5
Sample D Male 83.4
Ventral hippocampus
nTPM: 113.5
Samples: 4

Max nTPM: 130.9
Min nTPM: 80.3
Sample A Female 114.7
Sample B Female 80.3
Sample C Male 128.2
Sample D Male 130.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 334.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 266.9
Samples: 4

Max nTPM: 289.3
Min nTPM: 241.4
Sample A Male 250.2
Sample B Male 241.4
Sample C Female 289.3
Sample D Female 286.5
Hippocampal formation
nTPM: 334.0
Samples: 4

Max nTPM: 368.9
Min nTPM: 314.7
Sample A Male 332.6
Sample B Male 319.7
Sample C Female 368.9
Sample D Female 314.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 16.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.0
75080633 Antisense, RP_060412_04_G04, Mouse strain C57BL/6J (56 days, male) 18.3
74357646 Antisense, RP_060119_03_B08, Mouse strain C57BL/6J (56 days, male) 16.1
70919131 Antisense, RP_050712_04_C05, Mouse strain C57BL/6J (56 days, male) 13.6

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