We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CAPZB
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CAPZB
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:116.9 nTPM
HPA Brain:112.8 nTPM
GTEx:116.9 nTPM
Pig:119.5 nTPM
Mouse:214.0 nTPM
Allen mouse:10.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 103.3
2226 Male, age 75, left hemisphere 119.7
1961 Female, age 42, unknown 86.9
Dorsomedial nucleus
nTPM: 91.6
1989 Male, age 62, unknown 107.0
2041 Female, age 72, unknown 92.2
2017 Female, age 42, unknown 75.5
Lateral hypothalamic area
nTPM: 112.8
2271 Male, age 75, both hemispheres 137.9
1791 Male, age 80, right hemisphere 116.8
2228 Male, age 66, unknown 109.6
2412 Male, age 62, unknown 86.9
Mammillary body
nTPM: 99.2
1923 Female, age 72, unknown 108.0
2413 Male, age 66, unknown 105.7
1834 Female, age 42, unknown 95.3
1945 Male, age 80, right hemisphere 94.2
1948 Female, age 72, unknown 92.8
Paraventricular nucleus
nTPM: 92.6
2700 Male, age 62, unknown 92.6
Preoptic area
nTPM: 87.7
2414 Female, age 72, unknown 88.8
1907 Male, age 80, right hemisphere 88.6
1861 Female, age 42, unknown 85.7
Supraoptic nucleus
nTPM: 101.6
2835 Female, age 72, unknown 104.1
1894 Female, age 72, unknown 103.3
2043 Male, age 62, unknown 97.2
Ventromedial nucleus
nTPM: 96.4
1982 Female, age 72, unknown 100.2
1822 Female, age 42, unknown 92.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 116.9
Samples: 257

Max nTPM: 166.6
Min nTPM: 76.8
Std nTPM: 14.2
Median nTPM: 116.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 166.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 158.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 155.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 153.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 152.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 150.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 150.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 146.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 146.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 146.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 144.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 144.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 142.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 141.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 141.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 140.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 139.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 139.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 139.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 139.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 138.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 137.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 137.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 137.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 136.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 136.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 135.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 134.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 134.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 133.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 133.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 132.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 132.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 132.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 132.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 132.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 130.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 130.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 130.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 130.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 130.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 129.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 129.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 129.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 129.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 129.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 129.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 129.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 128.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 128.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 127.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 127.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 127.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 127.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 127.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 127.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 126.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 126.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 126.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 126.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 126.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 125.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 125.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 125.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 125.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 125.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 124.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 124.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 123.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 123.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 123.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 123.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 123.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 122.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 122.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 122.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 122.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 122.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 122.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 122.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 122.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 122.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 121.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 121.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 121.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 121.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 121.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 121.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 120.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 120.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 120.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 120.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 120.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 120.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 120.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 119.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 119.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 119.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 119.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 119.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 119.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 119.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 119.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 119.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 119.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 119.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 119.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 119.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 119.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 119.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 118.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 118.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 118.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 118.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 118.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 118.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 118.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 117.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 117.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 117.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 117.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 117.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 117.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 117.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 116.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 116.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 116.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 116.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 116.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 116.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 116.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 116.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 116.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 116.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 115.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 115.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 115.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 115.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 115.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 115.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 115.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 115.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 114.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 114.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 114.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 114.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 114.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 114.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 114.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 114.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 113.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 113.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 113.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 113.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 113.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 113.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 113.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 113.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 112.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 112.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 112.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 112.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 112.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 112.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 112.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 111.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 111.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 111.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 111.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 111.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 111.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 111.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 110.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 110.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 110.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 109.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 109.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 109.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 108.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 108.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 108.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 108.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 108.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 107.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 107.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 107.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 107.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 107.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 107.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 107.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 107.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 106.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 106.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 106.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 106.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 106.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 105.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 105.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 105.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 104.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 104.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 104.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 104.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 104.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 104.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 104.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 103.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 103.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 103.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 103.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 103.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 103.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 103.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 102.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 102.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 102.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 102.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 102.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 101.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 101.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 101.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 101.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 101.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 101.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 101.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 100.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 100.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 100.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 100.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 100.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 100.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 100.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 99.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 99.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 99.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 99.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 99.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 99.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 98.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 97.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 97.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 96.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 95.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 95.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 95.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 95.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 95.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 94.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 94.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 92.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 91.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 90.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 90.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 89.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 88.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 87.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 76.8
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

119.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 119.5
Samples: 4

Max nTPM: 143.7
Min nTPM: 99.2
Sample A Female 143.7
Sample B Female 120.2
Sample C Male 114.9
Sample D Male 99.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

214.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 214.0
Samples: 4

Max nTPM: 225.7
Min nTPM: 207.6
Sample A Male 207.6
Sample B Male 225.7
Sample C Female 212.7
Sample D Female 209.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.3
75080633 Antisense, RP_060412_04_G04, Mouse strain C57BL/6J (56 days, male) 13.3
70919131 Antisense, RP_050712_04_C05, Mouse strain C57BL/6J (56 days, male) 9.3
74357646 Antisense, RP_060119_03_B08, Mouse strain C57BL/6J (56 days, male) 8.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo