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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
405.2
nTPM
Monaco:
364.0
nTPM
Schmiedel:
373.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
405.2
HPA sample
nTPM
gdT-cell nTPM: 304.6
Samples: 6
Max nTPM: 351.9
Min nTPM: 247.8
P10809_1007
247.8
P10809_1022
351.9
P10809_1041
344.4
P10809_1060
279.9
P10809_1077
315.5
P10809_1098
287.8
MAIT T-cell nTPM: 265.5
Samples: 6
Max nTPM: 296.5
Min nTPM: 197.9
P10809_1006
197.9
P10809_1024
276.0
P10809_1043
281.6
P10809_1062
296.5
P10809_1083
266.8
P10809_1097
273.9
Memory CD4 T-cell nTPM: 319.3
Samples: 6
Max nTPM: 363.5
Min nTPM: 257.6
P10809_1014
257.6
P10809_1026
316.8
P10809_1045
363.5
P10809_1064
357.6
P10809_1086
323.9
P10809_1113
296.6
Memory CD8 T-cell nTPM: 329.3
Samples: 5
Max nTPM: 375.5
Min nTPM: 262.1
P10809_1012
262.1
P10809_1027
324.0
P10809_1046
355.3
P10809_1065
375.5
P10809_1111
329.4
Naive CD4 T-cell nTPM: 264.2
Samples: 6
Max nTPM: 311.2
Min nTPM: 198.2
P10809_1015
198.2
P10809_1030
249.9
P10809_1049
298.5
P10809_1068
274.2
P10809_1085
311.2
P10809_1112
253.1
Naive CD8 T-cell nTPM: 294.5
Samples: 6
Max nTPM: 360.7
Min nTPM: 227.7
P10809_1016
227.7
P10809_1031
310.0
P10809_1050
295.0
P10809_1069
360.7
P10809_1087
307.5
P10809_1110
266.1
T-reg nTPM: 405.2
Samples: 6
Max nTPM: 452.3
Min nTPM: 333.7
P10809_1018
333.7
P10809_1037
370.4
P10809_1056
452.3
P10809_1075
403.1
P10809_1094
428.9
P10809_1106
442.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
364.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 292.0
Samples: 4
Max nTPM: 344.3
Min nTPM: 239.9
RHH5202_R3573
239.9
RHH5230_R3602
335.3
RHH5259_R3631
248.5
RHH5288_R3660
344.3
Effector memory CD8 T-cell nTPM: 364.0
Samples: 4
Max nTPM: 474.3
Min nTPM: 225.4
RHH5203_R3574
376.9
RHH5231_R3603
474.3
RHH5260_R3632
379.5
RHH5289_R3661
225.4
MAIT T-cell nTPM: 301.0
Samples: 4
Max nTPM: 365.9
Min nTPM: 234.9
RHH5233_R3605
340.3
RHH5205_R3576
234.9
RHH5262_R3634
365.9
RHH5297_R3663
262.7
Memory CD4 T-cell TFH nTPM: 352.8
Samples: 4
Max nTPM: 471.9
Min nTPM: 203.3
RHH5300_R3666
359.9
RHH5236_R3608
471.9
RHH5265_R3637
376.2
RHH5208_R3579
203.3
Memory CD4 T-cell Th1 nTPM: 308.9
Samples: 4
Max nTPM: 370.1
Min nTPM: 259.3
RHH5210_R3581
259.3
RHH5302_R3668
370.1
RHH5238_R3610
289.2
RHH5267_R3639
316.8
Memory CD4 T-cell Th1/Th17 nTPM: 312.8
Samples: 4
Max nTPM: 476.2
Min nTPM: 170.1
RHH5303_R3669
281.1
RHH5211_R3582
476.2
RHH5239_R3611
170.1
RHH5268_R3640
323.7
Memory CD4 T-cell Th17 nTPM: 354.2
Samples: 4
Max nTPM: 428.4
Min nTPM: 293.1
RHH5304_R3670
293.1
RHH5212_R3583
428.4
RHH5240_R3612
361.3
RHH5269_R3641
333.8
Memory CD4 T-cell Th2 nTPM: 350.0
Samples: 4
Max nTPM: 372.8
Min nTPM: 323.3
RHH5305_R3671
348.3
RHH5213_R3584
323.3
RHH5241_R3613
355.4
RHH5270_R3642
372.8
Naive CD4 T-cell nTPM: 282.3
Samples: 4
Max nTPM: 321.0
Min nTPM: 247.4
RHH5306_R3672
321.0
RHH5214_R3585
267.7
RHH5242_R3614
293.1
RHH5271_R3643
247.4
Naive CD8 T-cell nTPM: 248.4
Samples: 4
Max nTPM: 371.3
Min nTPM: 122.6
RHH5201_R3572
122.6
RHH5229_R3601
200.0
RHH5258_R3630
371.3
RHH5287_R3659
299.5
Non-Vd2 gdTCR nTPM: 352.4
Samples: 4
Max nTPM: 451.6
Min nTPM: 276.0
RHH5235_R3607
301.1
RHH5264_R3636
451.6
RHH5207_R3578
276.0
RHH5299_R3665
380.8
T-reg nTPM: 306.5
Samples: 4
Max nTPM: 401.7
Min nTPM: 231.6
RHH5301_R3667
326.7
RHH5237_R3609
401.7
RHH5266_R3638
265.9
RHH5209_R3580
231.6
Terminal effector memory CD4 T-cell nTPM: 349.5
Samples: 2
Max nTPM: 380.2
Min nTPM: 318.7
RHH5243_R3615
318.7
RHH5272_R3644
380.2
Terminal effector memory CD8 T-cell nTPM: 349.8
Samples: 4
Max nTPM: 376.4
Min nTPM: 311.3
RHH5232_R3604
369.3
RHH5204_R3575
342.0
RHH5261_R3633
376.4
RHH5296_R3662
311.3
Vd2 gdTCR nTPM: 330.0
Samples: 4
Max nTPM: 374.0
Min nTPM: 289.0
RHH5234_R3606
374.0
RHH5206_R3577
344.3
RHH5263_R3635
312.7
RHH5298_R3664
289.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.