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  • TISSUE

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  • RPS5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:460.2 nTPM
HPA Brain:282.9 nTPM
GTEx:460.2 nTPM
Pig:188.2 nTPM
Mouse:619.0 nTPM
Allen mouse:10.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

282.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 211.3
1961 Female, age 42, unknown 250.7
2226 Male, age 75, left hemisphere 171.8
Dorsomedial nucleus
nTPM: 225.5
2041 Female, age 72, unknown 251.3
2017 Female, age 42, unknown 241.7
1989 Male, age 62, unknown 183.6
Lateral hypothalamic area
nTPM: 251.0
1791 Male, age 80, right hemisphere 280.7
2412 Male, age 62, unknown 263.5
2228 Male, age 66, unknown 248.1
2271 Male, age 75, both hemispheres 211.7
Mammillary body
nTPM: 250.9
1948 Female, age 72, unknown 265.8
1923 Female, age 72, unknown 260.0
1945 Male, age 80, right hemisphere 253.7
1834 Female, age 42, unknown 252.5
2413 Male, age 66, unknown 222.4
Paraventricular nucleus
nTPM: 211.6
2700 Male, age 62, unknown 211.6
Preoptic area
nTPM: 231.2
1861 Female, age 42, unknown 253.6
2414 Female, age 72, unknown 225.7
1907 Male, age 80, right hemisphere 214.4
Supraoptic nucleus
nTPM: 282.9
1894 Female, age 72, unknown 307.5
2043 Male, age 62, unknown 294.5
2835 Female, age 72, unknown 246.6
Ventromedial nucleus
nTPM: 229.9
1982 Female, age 72, unknown 242.0
1822 Female, age 42, unknown 217.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

460.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 460.2
Samples: 257

Max nTPM: 1985.0
Min nTPM: 216.4
Std nTPM: 189.8
Median nTPM: 414.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1985.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1256.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1197.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1118.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1113.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1036.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1005.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 952.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 869.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 816.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 806.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 750.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 743.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 734.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 718.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 716.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 715.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 711.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 703.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 703.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 701.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 699.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 683.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 681.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 678.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 663.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 659.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 656.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 652.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 647.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 644.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 635.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 633.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 621.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 618.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 618.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 615.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 612.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 612.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 602.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 594.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 587.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 578.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 576.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 573.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 566.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 562.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 560.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 560.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 558.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 548.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 548.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 547.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 544.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 543.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 536.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 534.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 532.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 530.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 529.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 527.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 524.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 517.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 516.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 510.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 508.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 508.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 506.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 505.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 501.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 501.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 498.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 490.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 490.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 489.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 486.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 481.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 476.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 472.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 472.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 471.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 469.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 467.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 467.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 464.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 459.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 459.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 458.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 458.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 457.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 455.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 455.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 454.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 453.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 452.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 451.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 450.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 449.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 449.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 449.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 448.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 448.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 445.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 443.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 442.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 442.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 441.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 438.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 433.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 431.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 431.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 428.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 426.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 426.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 426.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 425.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 425.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 425.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 423.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 423.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 422.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 422.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 420.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 420.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 420.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 419.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 418.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 416.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 414.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 414.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 414.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 413.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 411.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 409.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 408.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 408.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 406.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 404.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 404.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 404.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 403.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 399.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 398.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 397.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 397.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 396.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 396.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 395.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 394.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 392.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 392.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 392.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 391.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 390.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 390.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 389.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 389.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 388.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 382.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 382.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 380.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 379.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 379.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 378.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 378.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 378.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 376.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 376.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 375.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 374.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 370.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 370.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 370.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 370.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 369.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 368.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 367.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 367.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 366.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 365.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 364.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 363.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 361.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 358.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 358.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 357.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 356.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 355.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 355.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 354.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 353.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 352.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 352.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 351.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 351.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 350.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 350.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 350.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 349.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 347.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 345.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 344.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 344.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 342.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 337.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 337.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 337.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 333.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 332.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 329.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 328.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 327.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 326.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 325.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 323.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 319.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 319.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 318.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 316.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 316.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 316.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 315.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 315.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 313.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 313.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 312.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 312.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 306.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 305.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 303.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 301.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 301.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 301.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 300.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 299.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 295.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 290.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 288.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 287.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 286.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 286.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 285.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 279.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 277.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 277.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 275.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 274.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 274.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 273.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 254.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 250.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 245.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 235.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 232.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 228.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 223.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 216.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

188.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 188.2
Samples: 4

Max nTPM: 251.5
Min nTPM: 128.6
Sample A Female 251.5
Sample B Female 189.0
Sample C Male 183.5
Sample D Male 128.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

619.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 619.0
Samples: 4

Max nTPM: 725.4
Min nTPM: 563.2
Sample A Male 618.1
Sample B Male 725.4
Sample C Female 569.3
Sample D Female 563.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.1
77464982 Antisense, RP_070129_02_F08, Mouse strain C57BL/6J (56 days, male) 10.1
77868800 Antisense, RP_070129_02_F08, Mouse strain C57BL/6J (56 days, male) 5.0

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