HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni
Consensus:4345.7 nTPM
HPA Brain:1362.7 nTPM
GTEx:4345.7 nTPM
FANTOM5:845.2 Scaled Tags Per Million
Pig:2038.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004011Antibody CAB017779
Glial cells HighHigh
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 1362.7
Sample id Sample description nTPM
Hippocampus
nTPM: 1362.7
2529 Female, age 94, left hemisphere 1732.7
1898 Male, age 80, left hemisphere 1465.9
2148 Female, age 91, left hemisphere 1404.5
1911 Female, age 85, right hemisphere 1382.9
1855 Male, age 76, left hemisphere 1101.4
2621 Female, age 67, right hemisphere 1088.9
Dentate gyrus
nTPM: 1124.3
2528 Male, age 74, both hemispheres 1572.3
2010 Male, age 76, both hemispheres 1225.5
2246 Female, age 85, both hemispheres 1182.8
1927 Female, age 91, both hemispheres 1002.7
2530 Female, age 94, left hemisphere 998.8
2531 Female, age 67, both hemispheres 763.7
Entorhinal gyrus
nTPM: 1303.5
2117 Female, age 91, right hemisphere 1707.7
1938 Female, age 85, left hemisphere 1641.6
2686 Male, age 75, right hemisphere 1301.0
2764 Male, age 80, right hemisphere 1222.2
1787 Male, age 76, left hemisphere 1159.8
2613 Female, age 94, left hemisphere 788.4
Hippocampus, CA1
nTPM: 1292.7
2527 Male, age 74, both hemispheres 1833.4
2749 Male, age 80, left hemisphere 1422.3
2082 Female, age 91, right hemisphere 1125.9
1873 Female, age 85, both hemispheres 1118.2
2045 Male, age 76, both hemispheres 963.5
Hippocampus, CA2
nTPM: 1191.2
2249 Male, age 74, both hemispheres 1575.2
1940 Female, age 85, left hemisphere 1252.8
1963 Male, age 80, left hemisphere 1247.5
2113 Female, age 91, right hemisphere 1226.7
2437 Female, age 94, left hemisphere 946.5
1892 Male, age 76, both hemispheres 898.8
Hippocampus, CA3
nTPM: 1170.4
2436 Male, age 74, both hemispheres 1317.2
1891 Female, age 85, both hemispheres 1314.2
2137 Male, age 80, left hemisphere 1296.6
1867 Male, age 76, both hemispheres 1095.2
2861 Female, age 67, both hemispheres 1084.4
2620 Female, age 94, left hemisphere 914.7
Parahippocampal cortex
nTPM: 1306.7
1933 Female, age 85, both hemispheres 1688.9
2250 Female, age 67, right hemisphere 1581.1
2692 Male, age 74, both hemispheres 1512.3
2622 Female, age 67, right hemisphere 1333.7
2018 Male, age 76, both hemispheres 1307.3
1850 Male, age 80, both hemispheres 1215.3
2245 Female, age 91, both hemispheres 1213.1
1990 Female, age 91, right hemisphere 1198.1
2532 Female, age 72, left hemisphere 1115.9
2693 Female, age 94, both hemispheres 900.9
Perirhinal gyrus
nTPM: 1133.9
1794 Male, age 80, right hemisphere 1472.7
1847 Female, age 91, left hemisphere 1250.8
1841 Female, age 85, right hemisphere 1218.7
2521 Female, age 94, right hemisphere 1003.8
2848 Male, age 76, right hemisphere 723.7
Subiculum
nTPM: 1225.6
2619 Male, age 74, both hemispheres 1596.9
1977 Female, age 85, both hemispheres 1351.5
2729 Female, age 91, right hemisphere 1340.5
1901 Male, age 80, both hemispheres 1155.8
2042 Male, age 76, both hemispheres 1127.3
2438 Female, age 94, left hemisphere 781.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 4345.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4345.7
Samples: 255

Max nTPM: 13744.2
Min nTPM: 1051.5
Std nTPM: 2002.2
Median nTPM: 3951.6
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 13744.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 11929.4
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 11872.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 11183.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 10836.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 9227.7
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 8975.6
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 8678.1
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 8665.3
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 8549.2
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 8310.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 845.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 845.2
FF:10153-102I9 76 years, female 877.2
FF:10169-103B7 60 years, female 813.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 2038.6
Pig sample Sample description nTPM
Subiculum
nTPM: 1764.9
Samples: 4

Max nTPM: 2623.9
Min nTPM: 1413.5
Sample A Female 2623.9
Sample B Female 1487.1
Sample C Male 1413.5
Sample D Male 1534.9
Dorsal hippocampus
nTPM: 2001.1
Samples: 4

Max nTPM: 2913.3
Min nTPM: 1461.3
Sample A Female 2913.3
Sample B Female 1461.3
Sample C Male 2029.2
Sample D Male 1600.6
Entorhinal cortex
nTPM: 2038.6
Samples: 4

Max nTPM: 2443.7
Min nTPM: 1328.7
Sample A Female 2093.5
Sample B Female 2288.5
Sample C Male 2443.7
Sample D Male 1328.7
Ventral hippocampus
nTPM: 1803.3
Samples: 4

Max nTPM: 2225.3
Min nTPM: 1410.2
Sample A Female 1980.7
Sample B Female 1410.2
Sample C Male 2225.3
Sample D Male 1597.1

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