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  • SUMMARY

  • TISSUE

  • BRAIN

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  • MT3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:3262.6 nTPM
HPA Brain:1298.4 nTPM
GTEx:3262.6 nTPM
Pig:1189.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1298.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 885.1
2226 Male, age 75, left hemisphere 940.2
1961 Female, age 42, unknown 830.1
Dorsomedial nucleus
nTPM: 1057.8
1989 Male, age 62, unknown 1494.6
2041 Female, age 72, unknown 845.0
2017 Female, age 42, unknown 833.7
Lateral hypothalamic area
nTPM: 993.7
1791 Male, age 80, right hemisphere 1462.3
2271 Male, age 75, both hemispheres 909.7
2228 Male, age 66, unknown 811.8
2412 Male, age 62, unknown 790.9
Mammillary body
nTPM: 1298.4
1923 Female, age 72, unknown 1567.2
1945 Male, age 80, right hemisphere 1508.8
2413 Male, age 66, unknown 1278.9
1948 Female, age 72, unknown 1074.0
1834 Female, age 42, unknown 1063.3
Paraventricular nucleus
nTPM: 662.6
2700 Male, age 62, unknown 662.6
Preoptic area
nTPM: 987.2
1861 Female, age 42, unknown 1141.3
1907 Male, age 80, right hemisphere 935.8
2414 Female, age 72, unknown 884.4
Supraoptic nucleus
nTPM: 1152.0
2043 Male, age 62, unknown 1350.3
1894 Female, age 72, unknown 1275.3
2835 Female, age 72, unknown 830.5
Ventromedial nucleus
nTPM: 917.8
1982 Female, age 72, unknown 1048.2
1822 Female, age 42, unknown 787.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3262.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 3262.6
Samples: 257

Max nTPM: 14063.0
Min nTPM: 834.1
Std nTPM: 1703.5
Median nTPM: 2857.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 14063.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 11741.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 10205.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 8280.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 7288.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 7164.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 7112.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 6792.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 6302.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 6259.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 6239.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 6218.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 6164.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 6160.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 6061.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 6047.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 6045.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 6031.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 5985.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 5976.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 5909.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 5901.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 5797.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 5719.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 5679.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 5646.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 5516.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 5398.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 5250.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 5215.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 5133.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 5129.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 5082.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 5069.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 5043.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 5032.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 4983.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 4961.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 4903.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 4865.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 4841.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 4777.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 4680.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 4668.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 4648.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 4624.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 4588.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 4547.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 4543.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 4522.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 4515.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 4481.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 4478.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 4466.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 4226.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 4212.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 4166.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 4154.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 4133.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 4109.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 4108.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 4071.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 4056.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 3953.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 3944.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 3900.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 3869.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 3855.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 3854.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 3743.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 3678.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 3664.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 3649.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 3614.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 3585.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 3532.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 3530.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 3489.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 3485.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 3464.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 3441.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 3432.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 3427.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 3414.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 3399.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 3396.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 3361.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 3337.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 3325.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 3313.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 3299.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 3279.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 3260.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 3259.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 3244.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 3238.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 3226.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 3216.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 3207.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 3192.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 3180.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 3168.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 3157.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 3154.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 3146.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 3124.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 3118.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 3110.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 3093.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 3082.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 3071.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 3071.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 3045.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 3042.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 3031.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 3030.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 3004.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 3003.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 2996.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 2957.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 2953.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 2923.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 2911.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 2905.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 2894.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 2887.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 2878.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 2861.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 2857.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 2806.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 2791.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 2786.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 2777.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 2772.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 2753.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 2726.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 2725.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 2719.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 2716.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 2698.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 2683.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 2677.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 2674.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 2662.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 2639.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 2604.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 2602.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 2593.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 2591.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 2588.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 2576.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 2574.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 2569.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 2554.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 2537.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 2509.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 2487.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 2462.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 2460.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 2460.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 2453.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 2434.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 2421.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 2413.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 2411.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 2403.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 2401.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 2392.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 2388.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 2385.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 2361.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 2355.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 2348.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 2335.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 2334.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 2325.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 2314.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 2311.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 2307.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 2302.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 2287.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 2285.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 2274.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 2245.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 2245.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 2241.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 2239.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 2230.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 2220.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 2217.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 2213.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 2183.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 2159.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 2152.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 2113.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 2111.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 2079.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 2075.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 2053.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 2041.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 2030.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 2016.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 2009.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 2003.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 2000.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 1991.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 1983.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 1966.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 1952.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1945.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1933.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1932.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 1931.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 1928.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 1920.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 1920.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 1898.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 1898.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 1884.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 1863.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 1848.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 1826.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 1807.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 1804.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 1789.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1786.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 1775.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1768.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 1748.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 1737.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 1731.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 1713.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 1711.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 1678.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 1676.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1673.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 1610.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 1608.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 1564.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 1545.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 1498.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 1464.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 1445.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 1431.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 1418.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 1322.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 1321.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 1316.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 1309.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1288.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 1246.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 1225.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 1189.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 1114.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 1046.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 987.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 834.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1189.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 1189.2
Samples: 4

Max nTPM: 1503.3
Min nTPM: 765.2
Sample A Female 1503.3
Sample B Female 1215.3
Sample C Male 1272.8
Sample D Male 765.2

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