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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
507.9
Sample id
Sample description
nTPM
Hippocampus nTPM: 392.1
1898
Male, age 80, left hemisphere
562.3
1855
Male, age 76, left hemisphere
443.1
2529
Female, age 94, left hemisphere
373.0
2621
Female, age 67, right hemisphere
362.0
1911
Female, age 85, right hemisphere
346.9
2148
Female, age 91, left hemisphere
264.9
Dentate gyrus nTPM: 371.3
2010
Male, age 76, both hemispheres
521.5
1927
Female, age 91, both hemispheres
440.7
2246
Female, age 85, both hemispheres
381.4
2528
Male, age 74, both hemispheres
327.1
2530
Female, age 94, left hemisphere
317.4
2531
Female, age 67, both hemispheres
240.0
Entorhinal gyrus nTPM: 369.5
1938
Female, age 85, left hemisphere
535.0
2764
Male, age 80, right hemisphere
472.0
1787
Male, age 76, left hemisphere
421.6
2117
Female, age 91, right hemisphere
300.9
2613
Female, age 94, left hemisphere
267.9
2686
Male, age 75, right hemisphere
219.2
Hippocampus, CA1 nTPM: 476.4
2749
Male, age 80, left hemisphere
771.3
1873
Female, age 85, both hemispheres
478.6
2045
Male, age 76, both hemispheres
424.7
2527
Male, age 74, both hemispheres
403.0
2082
Female, age 91, right hemisphere
304.5
Hippocampus, CA2 nTPM: 408.1
1892
Male, age 76, both hemispheres
551.1
1963
Male, age 80, left hemisphere
518.2
2249
Male, age 74, both hemispheres
483.4
2437
Female, age 94, left hemisphere
316.8
1940
Female, age 85, left hemisphere
300.2
2113
Female, age 91, right hemisphere
279.0
Hippocampus, CA3 nTPM: 403.3
2137
Male, age 80, left hemisphere
602.3
1867
Male, age 76, both hemispheres
476.5
2436
Male, age 74, both hemispheres
466.1
1891
Female, age 85, both hemispheres
378.9
2620
Female, age 94, left hemisphere
296.4
2861
Female, age 67, both hemispheres
199.4
Parahippocampal cortex nTPM: 365.8
1850
Male, age 80, both hemispheres
562.6
2018
Male, age 76, both hemispheres
452.3
1933
Female, age 85, both hemispheres
452.1
1990
Female, age 91, right hemisphere
405.8
2245
Female, age 91, both hemispheres
352.0
2250
Female, age 67, right hemisphere
349.7
2532
Female, age 72, left hemisphere
338.3
2692
Male, age 74, both hemispheres
272.1
2693
Female, age 94, both hemispheres
259.2
2622
Female, age 67, right hemisphere
214.0
Perirhinal gyrus nTPM: 507.9
1847
Female, age 91, left hemisphere
615.7
1794
Male, age 80, right hemisphere
572.2
1841
Female, age 85, right hemisphere
559.4
2848
Male, age 76, right hemisphere
460.3
2521
Female, age 94, right hemisphere
331.7
Subiculum nTPM: 383.0
1901
Male, age 80, both hemispheres
458.5
1977
Female, age 85, both hemispheres
453.3
2042
Male, age 76, both hemispheres
417.8
2438
Female, age 94, left hemisphere
401.3
2619
Male, age 74, both hemispheres
288.9
2729
Female, age 91, right hemisphere
278.5
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
875.0
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 875.0
Samples: 255
Max nTPM: 2246.0
Min nTPM: 224.0
Std nTPM: 339.0
Median nTPM: 819.9
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
2246.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
2144.3
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
1987.2
GTEX-12126-0011-R1a-SM-GJ3Q8
20-29 years, male
1884.5
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
1829.6
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
1809.5
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
1773.7
GTEX-1192X-0011-R1b-SM-GI4VU
50-59 years, male
1725.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
1714.5
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
1613.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
1599.9
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
1586.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
1545.8
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
1483.6
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
1442.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
1429.1
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
1417.9
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
1409.2
GTEX-1P4AB-0011-R1b-SM-F2TAV
50-59 years, male
1390.0
GTEX-11ZUS-0011-R1a-SM-GI4W7
30-39 years, male
1387.6
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
1386.3
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
1381.4
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
1378.8
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
1344.8
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
1319.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
1317.8
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
1291.7
GTEX-11NV4-0011-R1a-SM-GINAK
60-69 years, male
1269.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
1265.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
1264.4
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
1238.9
GTEX-12ZZZ-0011-R1a-SM-GIN8I
60-69 years, male
1234.6
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
1228.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
1228.6
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
1211.3
GTEX-RU72-0011-R1A-SM-HAUZG
50-59 years, female
1210.6
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
1209.7
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
1207.9
GTEX-1JMQJ-0011-R1b-SM-F2T9P
50-59 years, male
1197.7
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
1175.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
1168.3
GTEX-1MJK2-0011-R1b-SM-F649H
50-59 years, male
1167.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
1163.2
GTEX-11H98-0011-R1a-SM-GIN8O
50-59 years, male
1159.6
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
1159.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
1155.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
1155.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
1154.9
GTEX-1O9I2-0011-R1a-SM-F2TAW
50-59 years, male
1147.4
GTEX-15SHU-0011-R1b-SM-H6Q7U
40-49 years, female
1136.6
GTEX-ZAK1-0011-R1a-SM-GRR1R
50-59 years, female
1130.9
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
1123.1
GTEX-14BMV-0011-R1b-SM-G9ERL
50-59 years, male
1118.7
GTEX-11OF3-0011-R1b-SM-H65ZT
60-69 years, male
1110.7
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
1108.4
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
1106.0
GTEX-1POEN-0011-R1b-SM-F3K3K
30-39 years, female
1093.8
GTEX-ZZPT-0011-R1b-SM-GNINL
50-59 years, male
1092.2
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
1090.1
GTEX-1PIIG-0011-R1a-SM-F649P
30-39 years, male
1072.6
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
1067.5
GTEX-117XS-0011-R1b-SM-GJ3PQ
60-69 years, male
1065.9
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
1041.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
1037.1
GTEX-13VXU-0011-R1a-SM-GINAT
50-59 years, male
1033.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
1027.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
1026.8
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
1021.9
GTEX-15DYW-0011-R1a-SM-H6Q6Q
60-69 years, female
1010.6
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
1006.2
GTEX-13SLX-0011-R1a-SM-H6Q8N
50-59 years, female
1004.3
GTEX-15RJE-0011-R1b-SM-H6Q7N
40-49 years, male
1003.2
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
1001.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
996.0
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
993.6
GTEX-1N2EE-0011-R1a-SM-F3K5K
60-69 years, male
988.3
GTEX-11DXY-0011-R1b-SM-GI4VQ
60-69 years, male
985.8
GTEX-ZAJG-0011-R1a-SM-GQ1CV
50-59 years, female
985.7
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
973.0
GTEX-1MA7X-0011-R1b-SM-F2TAB
60-69 years, male
972.6
GTEX-1R9PO-0011-R1b-SM-F2I2G
60-69 years, female
970.6
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
967.6
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
960.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
957.4
GTEX-14JFF-0011-R1b-SM-G8W88
60-69 years, male
956.4
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
956.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
953.1
GTEX-1F52S-0011-R1a-SM-9OSX9
60-69 years, female
952.9
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
950.8
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
950.4
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
947.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
946.3
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
943.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
938.8
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
938.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
923.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
921.5
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
917.4
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
917.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
911.2
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
909.7
GTEX-1JJEA-0011-R1b-SM-F6495
60-69 years, male
905.1
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
904.4
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
903.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
899.6
GTEX-12WSA-0011-R1b-SM-GI4VI
60-69 years, male
894.8
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
881.5
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
880.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
873.0
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
870.7
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
864.4
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
864.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
856.8
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
853.6
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
850.5
GTEX-1N2EF-0011-R1a-SM-F2TAT
60-69 years, male
849.1
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
847.2
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
840.2
GTEX-15EO6-0011-R1b-SM-H7OGP
50-59 years, male
834.4
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
829.8
GTEX-1LVAO-0011-R1a-SM-F649O
60-69 years, male
829.7
GTEX-12ZZY-0011-R1a-SM-GIN9E
60-69 years, male
828.9
GTEX-1JJ6O-0011-R1b-SM-F2I2M
60-69 years, male
827.2
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
826.9
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
825.5
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
823.1
GTEX-11DYG-0011-R1a-SM-GI4X6
60-69 years, male
821.7
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
819.9
GTEX-1I19N-0011-R1b-SM-GOR1A
70-79 years, male
819.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
813.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
805.8
GTEX-ZYY3-0011-R1b-SM-GPI92
60-69 years, female
802.6
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
802.2
GTEX-1KWVE-0011-R1a-SM-F649B
30-39 years, male
801.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
792.2
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
782.7
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
782.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
780.1
GTEX-1KD4Q-0011-R1a-SM-F3K4Z
40-49 years, male
778.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
777.2
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
777.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
775.3
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
774.8
GTEX-1LH75-0011-R1a-SM-F341Y
50-59 years, female
774.8
GTEX-1MCQQ-0011-R1a-SM-F341G
60-69 years, male
773.4
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
773.3
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
772.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
771.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
765.7
GTEX-1OJC4-0011-R1a-SM-F2TAZ
50-59 years, female
755.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
748.4
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
746.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
744.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
741.2
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
738.5
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
736.6
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
732.4
GTEX-11PRG-0011-R1b-SM-H7OHD
50-59 years, male
731.4
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
729.7
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
724.1
GTEX-ZYFD-0011-R1b-SM-GRR1T
50-59 years, male
723.0
GTEX-1LSVX-0011-R1a-SM-F3K5F
60-69 years, male
719.5
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
717.1
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
715.7
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
711.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
706.4
GTEX-1PPGY-0011-R1b-SM-G8LN3
60-69 years, male
699.7
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
693.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
692.9
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
692.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
691.2
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
691.0
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
682.6
GTEX-14DAQ-0011-R1a-SM-G8W85
60-69 years, female
680.9
GTEX-1JMLX-0011-R1b-SM-G9ERV
50-59 years, male
680.9
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
679.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
677.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
676.6
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
668.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
666.6
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
664.1
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
655.8
GTEX-1R9K4-0011-R1a-SM-F342F
60-69 years, male
652.1
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
650.4
GTEX-1JMOU-0011-R1b-SM-F341B
60-69 years, female
648.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
648.0
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
644.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
643.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
638.7
GTEX-1LVA9-0011-R1b-SM-F2TB5
50-59 years, male
634.4
GTEX-1NV8Z-0011-R1b-SM-F647K
60-69 years, male
631.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
628.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
627.7
GTEX-1RQEC-0011-R1b-SM-F2I2E
60-69 years, male
625.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
624.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
623.3
GTEX-1JN6P-0011-R1b-SM-G8LL3
60-69 years, male
622.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
622.5
GTEX-1RDX4-0011-R1a-SM-F3K5H
50-59 years, female
619.1
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
618.4
GTEX-1QMI2-0011-R1b-SM-F3K5Q
60-69 years, male
613.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
610.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
603.2
GTEX-1QP6S-0011-R1b-SM-F3K59
40-49 years, male
598.2
GTEX-1RNSC-0011-R1b-SM-F342D
60-69 years, male
595.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
590.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
589.5
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
581.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
580.6
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
579.5
GTEX-13PVQ-0011-R1b-SM-GJ3RQ
50-59 years, male
578.1
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
576.8
GTEX-1LSNL-0011-R1a-SM-F3K51
50-59 years, male
573.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
571.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
563.0
GTEX-1RQED-0011-R1a-SM-F3K5W
60-69 years, male
560.1
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
559.2
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
546.6
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
542.2
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
539.5
GTEX-1JMQK-0011-R1a-SM-F6484
60-69 years, male
539.0
GTEX-1JMPZ-0011-R1b-SM-F6497
30-39 years, male
538.9
GTEX-12696-0011-R1a-SM-GHWPW
60-69 years, male
527.8
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
527.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
526.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
523.2
GTEX-13PLJ-0011-R1a-SM-GJ3QF
60-69 years, female
517.6
GTEX-11TTK-0011-R1b-SM-GIN92
60-69 years, female
515.3
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
509.0
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
507.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
504.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
500.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
487.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
484.0
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
478.6
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
466.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
461.6
GTEX-1N5O9-0011-R1b-SM-F3K4W
60-69 years, male
460.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
460.2
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
456.4
GTEX-1PWST-0011-R1b-SM-F2I38
70-79 years, male
454.0
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
450.4
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
438.1
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
431.2
GTEX-1JMQL-0011-R1a-SM-F3K4U
50-59 years, female
430.2
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
418.0
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
416.6
GTEX-1LKK1-0011-R1b-SM-F2TAF
50-59 years, female
407.7
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
401.0
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
400.6
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
371.6
GTEX-1KANB-0011-R1a-SM-F3K5M
50-59 years, male
364.0
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
338.2
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
296.3
GTEX-14E6C-0011-R1a-SM-G8W86
40-49 years, male
224.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
332.8
Pig sample
Sample description
nTPM
Subiculum nTPM: 208.1
Samples: 4
Max nTPM: 253.2
Min nTPM: 182.3
Sample A
Female
253.2
Sample B
Female
195.1
Sample C
Male
182.3
Sample D
Male
201.6
Dorsal hippocampus nTPM: 332.8
Samples: 4
Max nTPM: 470.6
Min nTPM: 249.6
Sample A
Female
470.6
Sample B
Female
335.9
Sample C
Male
275.0
Sample D
Male
249.6
Entorhinal cortex nTPM: 173.5
Samples: 4
Max nTPM: 194.4
Min nTPM: 158.4
Sample A
Female
194.4
Sample B
Female
181.9
Sample C
Male
159.3
Sample D
Male
158.4
Ventral hippocampus nTPM: 289.4
Samples: 4
Max nTPM: 399.0
Min nTPM: 177.3
Sample A
Female
309.0
Sample B
Female
177.3
Sample C
Male
272.2
Sample D
Male
399.0
HIPPOCAMPAL FORMATION - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
395.1
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 300.3
Samples: 4
Max nTPM: 342.3
Min nTPM: 259.5
Sample A
Male
259.5
Sample B
Male
284.9
Sample C
Female
342.3
Sample D
Female
314.5
Hippocampal formation nTPM: 395.1
Samples: 4
Max nTPM: 450.9
Min nTPM: 369.5
Sample A
Male
450.9
Sample B
Male
372.6
Sample C
Female
387.4
Sample D
Female
369.5
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.