On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
758.3
nTPM
HPA Brain:
458.5
nTPM
GTEx:
758.3
nTPM
Macaque:
225.1
nTPM
Mouse:
107.6
nTPM
Rat:
256.1
nTPM
Pig:
168.3
nTPM
HYPOTHALAMUS - SINGLE NUCLEI RNA EXPRESSIONi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NEURONSi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Unassigned AVP+
c-2
Excitatory (VGLUT2) TAC1+
c-3
Inhibitory (GAD1/2) AVP+
c-4
Unassigned AVP+
c-5
Excitatory (VGLUT2)
c-6
Excitatory (VGLUT2)
c-7
Inhibitory (GAD1/2) DRD2+ L...
c-8
Inhibitory (GAD1/2) ESR1+
c-9
Excitatory (VGLUT2)
c-10
Excitatory (VGLUT2) TAC1+
c-11
Inhibitory (GAD1/2) ESR1+
c-12
Inhibitory (GAD1/2) DRD1+ L...
c-13
Excitatory (VGLUT2)
c-14
Inhibitory (GAD1/2)
c-15
Excitatory (VGLUT2)
c-16
Excitatory (VGLUT2)
c-17
Inhibitory (GAD1/2)
c-18
Inhibitory (GAD1/2) GAL+
c-19
Excitatory (VGLUT1)
c-20
Excitatory (VGLUT2) ESR1+
c-21
Inhibitory (GAD1/2) DRD1+ L...
c-22
Inhibitory (GAD1/2) RORB+ K
c-23
Inhibitory (GAD1/2) SST+ NP
c-24
Inhibitory (GAD1/2) CXCL14+
c-25
Excitatory (VGLUT2)
c-26
Inhibitory (GAD1/2)
c-27
Excitatory (VGLUT2)
c-28
Unassigned
c-29
Inhibitory (GAD1/2) ESR1+
c-30
Excitatory (VGLUT2)
c-31
Excitatory (VGLUT1/2)
c-32
Inhibitory (GAD1/2) GAL+
c-33
Excitatory (VGLUT2)
c-34
Monoaminergic Inhibitory (G...
c-35
Excitatory (VGLUT2) TAC1+
c-36
Inhibitory (GAD1/2) LHX6+ T...
c-37
Excitatory (VGLUT2)
c-38
Inhibitory (GAD1/2) SST+
c-39
Inhibitory (GAD1/2) MEIS2+
c-40
Unassigned
c-41
Inhibitory (GAD1/2) SST+
c-42
Excitatory (VGLUT1)
c-43
Excitatory (VGLUT2) TAC1+
c-44
Unassigned AVP+
c-45
Inhibitory (GAD1/2) LAMP5+ ...
c-46
Excitatory (VGLUT2)
c-47
Inhibitory (GAD1/2) LHX6+ T...
c-48
Parvocellular CRH+ AVP+ OXT
c-49
Magnocellular TH+ AVP+ OXT+
c-50
Excitatory (VGLUT1)
c-51
Parvocellular (VGLUT2) AVP...
c-52
Inhibitory (GAD1/2) NOS1+ M...
c-53
Inhibitory (GAD1/2) TAC1+ D...
c-54
Inhibitory (GAD1/2) SST+
c-55
Excitatory (VGLUT1)
c-56
Excitatory (VGLUT1) ETV1+ Z...
c-57
HCRT+ RXF4+
c-58
Excitatory (VGLUT1/2) TAC1+
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This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NON-NEURONALi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Oligodendrocytes
c-2
Oligodendrocytes
c-3
Oligodendrocytes
c-4
Astrocytes (LHX2+)
c-5
Microglia
c-6
Oligodendrocytes
c-7
Astrocytes (CD44+)
c-8
Oligodendrocytes
c-9
Oligodendrocyte progenitor ...
c-10
Microglia
c-11
Oligodendrocytes
c-12
Astrocytes
c-13
Astrocytes (CD44+)
c-14
Oligodendrocyte progenitor ...
c-15
Oligodendrocyte progenitor ...
c-16
Microglia
c-17
Oligodendrocytes
c-18
Oligodendrocyte progenitor ...
c-19
Astrocytes
c-20
Fibroblasts
c-21
Oligodendrocytes
c-22
Oligodendrocytes
c-23
Ependymal cells
c-24
Vascular endothelial cells
c-25
Astrocytes (LHX2+)
c-26
Macrophages
c-27
Astrocytes
c-28
T-cells
c-29
Vascular smooth muscle cell
c-30
Fibroblasts (BNC2+ KCNMA1+ ...
c-31
Pericytes
c-32
Oligodendrocyte progenitor ...
c-33
Immature oligodendrocytes
c-34
Oligodendrocyte progenitor ...
c-35
NK-cells
c-36
Mural cells
c-37
Monocytes
c-38
Fibroblasts (BNC2+ TRPM3+)
c-39
Lymphocytes
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This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis
HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
458.5
Sample id
Sample description
nTPM
Arcuate nucleus nTPM: 417.8
2226
Male, age 75, left hemisphere
480.6
1961
Female, age 42, unknown
355.0
Dorsomedial nucleus nTPM: 327.9
2041
Female, age 72, unknown
404.5
2017
Female, age 42, unknown
328.0
1989
Male, age 62, unknown
251.3
Lateral hypothalamic area nTPM: 458.5
2228
Male, age 66, unknown
627.4
2271
Male, age 75, both hemispheres
482.7
1791
Male, age 80, right hemisphere
468.8
2412
Male, age 62, unknown
255.3
Mammillary body nTPM: 338.0
1923
Female, age 72, unknown
437.6
1948
Female, age 72, unknown
327.5
1945
Male, age 80, right hemisphere
315.4
2413
Male, age 66, unknown
314.2
1834
Female, age 42, unknown
295.1
Paraventricular nucleus nTPM: 391.0
2700
Male, age 62, unknown
391.0
Preoptic area nTPM: 356.1
1907
Male, age 80, right hemisphere
425.6
2414
Female, age 72, unknown
326.1
1861
Female, age 42, unknown
316.6
Supraoptic nucleus nTPM: 422.0
1894
Female, age 72, unknown
503.2
2043
Male, age 62, unknown
430.0
2835
Female, age 72, unknown
332.7
Ventromedial nucleus nTPM: 375.4
1982
Female, age 72, unknown
418.8
1822
Female, age 42, unknown
332.1
HYPOTHALAMUS - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
758.3
GTEx sample id
Sample description
nTPM
Brain - Hypothalamus Average nTPM: 758.3
Samples: 257
Max nTPM: 1625.4
Min nTPM: 264.1
Std nTPM: 184.9
Median nTPM: 743.5
GTEX-144GL-0011-R8a-SM-5Q5B1
50-59 years, male
1625.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ
50-59 years, male
1571.1
GTEX-139TS-0011-R8a-SM-5J1NP
60-69 years, male
1489.7
GTEX-1GN1U-0011-R8a-SM-CL537
50-59 years, female
1374.3
GTEX-13PDP-0011-R8b-SM-5O9CS
60-69 years, male
1215.3
GTEX-13FXS-0011-R8a-SM-5J1MN
50-59 years, male
1215.0
GTEX-1B8L1-0011-R8b-SM-7P8ST
60-69 years, male
1196.9
GTEX-11DZ1-0011-R8b-SM-DNZZI
50-59 years, male
1175.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E
60-69 years, male
1114.3
GTEX-1A8G6-0011-R8a-SM-7P8PD
60-69 years, male
1076.1
GTEX-12126-0011-R8a-SM-GI4WV
20-29 years, male
1057.4
GTEX-WWYW-0011-R8A-SM-3NB3S
50-59 years, female
1057.0
GTEX-1C6WA-0011-R8b-SM-7P8S7
60-69 years, male
1055.9
GTEX-1A8G7-0011-R8a-SM-7P8S6
60-69 years, male
1037.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K
50-59 years, female
1031.8
GTEX-111FC-0011-R8b-SM-GI4VS
60-69 years, male
1031.7
GTEX-1F52S-0011-R8a-SM-9OSXA
60-69 years, female
1029.3
GTEX-13CIG-0011-R8b-SM-5LZX5
50-59 years, male
1005.0
GTEX-1313W-0011-R8a-SM-5DUVM
50-59 years, female
978.2
GTEX-1LSNL-0011-R8b-SM-F2TAH
50-59 years, male
974.6
GTEX-Z93S-0011-R8a-SM-4RGNL
50-59 years, male
970.1
GTEX-1O9I2-0011-R8a-SM-F2TAX
50-59 years, male
966.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4
60-69 years, male
966.1
GTEX-14JIY-0011-R8a-SM-6AJAP
60-69 years, male
954.1
GTEX-1P4AB-0011-R8a-SM-F341R
50-59 years, male
951.3
GTEX-1HFI6-0011-R8a-SM-ARZLP
40-49 years, male
942.3
GTEX-13FLW-0011-R8b-SM-5J1MZ
50-59 years, male
940.3
GTEX-X585-0011-R8A-SM-46MUX
50-59 years, male
939.3
GTEX-ZAK1-0011-R8a-SM-H7OGE
50-59 years, female
939.0
GTEX-13QIC-0011-R8b-SM-5O9CV
60-69 years, female
938.6
GTEX-1LSVX-0011-R8a-SM-F2TB3
60-69 years, male
931.3
GTEX-1R9PO-0011-R8a-SM-F2TA3
60-69 years, female
929.4
GTEX-15CHQ-0011-R8b-SM-CNPO4
60-69 years, male
926.4
GTEX-ZF28-0011-R8a-SM-4WWFW
60-69 years, male
924.9
GTEX-1IKK5-0011-R8b-SM-CJI45
60-69 years, male
921.9
GTEX-13NYS-0011-R8a-SM-5MR5H
60-69 years, male
921.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ
60-69 years, male
920.6
GTEX-1399T-0011-R8b-SM-5IJD8
60-69 years, male
916.5
GTEX-RNOR-0011-R8A-SM-EZ6MN
50-59 years, female
916.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C
50-59 years, male
915.3
GTEX-11DXW-0011-R8a-SM-GIN8T
40-49 years, male
913.4
GTEX-1HGF4-0011-R8b-SM-CKZP9
60-69 years, male
907.7
GTEX-1192X-0011-R8b-SM-DO11U
50-59 years, male
900.8
GTEX-117XS-0011-R8b-SM-GHWOD
60-69 years, male
900.1
GTEX-X4XX-0011-R8B-SM-46MWM
60-69 years, male
898.9
GTEX-1A3MX-0011-R8a-SM-7P8PI
60-69 years, male
894.9
GTEX-13OVH-0011-R8b-SM-5MR35
70-79 years, male
893.3
GTEX-1GF9V-0011-R8b-SM-CE6RB
60-69 years, male
892.6
GTEX-13NYB-0011-R8a-SM-5KM4R
40-49 years, male
891.8
GTEX-1F88E-0011-R8a-SM-CJI2H
60-69 years, female
888.5
GTEX-11GSO-0011-R8b-SM-GJ3PM
60-69 years, male
884.8
GTEX-14LZ3-0011-R8b-SM-COH3M
60-69 years, female
883.9
GTEX-1GN73-0011-R8b-SM-CKZNY
60-69 years, male
881.6
GTEX-11OF3-0011-R8b-SM-57WCS
60-69 years, male
880.9
GTEX-ZVZQ-0011-R8a-SM-51MR5
60-69 years, female
879.0
GTEX-17HII-0011-R8a-SM-79OK6
50-59 years, male
878.7
GTEX-1GMR8-0011-R8a-SM-CKZNX
50-59 years, female
873.7
GTEX-1GZ4I-0011-R8b-SM-9WG76
50-59 years, male
873.3
GTEX-1N2EE-0011-R8a-SM-F3K4X
60-69 years, male
868.9
GTEX-1HT8W-0011-R8b-SM-CM2SX
30-39 years, male
868.4
GTEX-13RTJ-0011-R8b-SM-5O9DL
60-69 years, male
866.0
GTEX-YFC4-0011-R8a-SM-4SOK3
40-49 years, female
863.7
GTEX-1B933-0011-R8a-SM-9QEGX
50-59 years, female
861.4
GTEX-11DXY-0011-R8a-SM-DO11M
60-69 years, male
861.0
GTEX-1F75W-0011-R8a-SM-9QEI4
60-69 years, male
861.0
GTEX-13SLX-0011-R8b-SM-5PNWZ
50-59 years, female
857.1
GTEX-1KD4Q-0011-R8a-SM-F341N
40-49 years, male
854.9
GTEX-117YW-0011-R8a-SM-GINAB
50-59 years, male
853.8
GTEX-1JN1M-0011-R8b-SM-F6485
60-69 years, female
853.3
GTEX-13O3Q-0011-R8b-SM-5KM2J
50-59 years, male
852.9
GTEX-1F6IF-0011-R8a-SM-9OSX5
60-69 years, male
852.2
GTEX-13VXU-0011-R8b-SM-GJ3RR
50-59 years, male
851.3
GTEX-1MA7X-0011-R8a-SM-G9EQD
60-69 years, male
850.1
GTEX-1RQEC-0011-R8b-SM-F648X
60-69 years, male
847.3
GTEX-1MJK2-0011-R8a-SM-F341I
50-59 years, male
840.0
GTEX-17EVQ-0011-R8a-SM-7189T
70-79 years, male
838.0
GTEX-1N2DW-0011-R8a-SM-EY5YD
50-59 years, male
836.4
GTEX-WZTO-0011-R8A-SM-4E3II
40-49 years, male
836.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT
50-59 years, male
836.2
GTEX-1PPGY-0011-R8a-SM-F649R
60-69 years, male
834.0
GTEX-NL4W-0011-R8a-SM-2I3G4
50-59 years, male
831.5
GTEX-11DYG-0011-R8a-SM-DO93F
60-69 years, male
831.2
GTEX-1B8SF-0011-R8b-SM-7P8SX
60-69 years, male
828.2
GTEX-11NV4-0011-R8b-SM-GHWO4
60-69 years, male
827.0
GTEX-1IY9M-0011-R8a-SM-EYYWW
60-69 years, male
826.2
GTEX-WL46-0011-R8B-SM-H7OHG
50-59 years, male
825.1
GTEX-ZYY3-0011-R8a-SM-H7OHF
60-69 years, female
824.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS
50-59 years, male
821.1
GTEX-1F75A-0011-R8a-SM-CL539
50-59 years, male
818.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J
60-69 years, male
814.3
GTEX-15EO6-0011-R8a-SM-H6Q6R
50-59 years, male
814.2
GTEX-13NZA-0011-R8b-SM-5KM2Q
60-69 years, male
812.1
GTEX-15ER7-0011-R8a-SM-7KUL2
20-29 years, female
811.5
GTEX-11EI6-0011-R8a-SM-DO93M
60-69 years, male
810.8
GTEX-145LU-0011-R8b-SM-5PNZG
50-59 years, male
807.6
GTEX-1RQED-0011-R8a-SM-G8LKO
60-69 years, male
805.2
GTEX-P44H-0011-R8A-SM-2XCEL
40-49 years, male
804.3
GTEX-131XH-0011-R8a-SM-5EGLL
50-59 years, male
801.4
GTEX-T6MN-0011-R8A-SM-32QP3
50-59 years, male
801.2
GTEX-15G19-0011-R8b-SM-7KUL1
60-69 years, male
800.3
GTEX-14PJM-0011-R8b-SM-69LPD
50-59 years, female
799.3
GTEX-1JMOU-0011-R8b-SM-F2TA9
60-69 years, female
798.9
GTEX-1NV5F-0011-R8b-SM-F647Z
60-69 years, female
795.9
GTEX-11O72-0011-R8a-SM-GJ3R9
40-49 years, male
793.4
GTEX-13SLW-0011-R8b-SM-5SI64
70-79 years, male
789.7
GTEX-145MH-0011-R8a-SM-5PNUL
50-59 years, male
789.4
GTEX-11GS4-0011-R8b-SM-GI4XA
60-69 years, male
788.7
GTEX-1C6VR-0011-R8b-SM-7MXUF
60-69 years, male
784.4
GTEX-NPJ8-0011-R8a-SM-2HMLG
40-49 years, male
783.5
GTEX-1I1CD-0011-R8b-SM-CJI3X
60-69 years, female
780.9
GTEX-1HCVE-0011-R8a-SM-ARU7A
50-59 years, male
774.9
GTEX-1B8SG-0011-R8b-SM-7IGNW
50-59 years, male
774.7
GTEX-13N1W-0011-R8a-SM-5MR56
70-79 years, male
774.5
GTEX-X261-0011-R8A-SM-4E3I5
50-59 years, male
770.8
GTEX-11ZUS-0011-R8a-SM-5BC73
30-39 years, male
767.8
GTEX-14ASI-0011-R8b-SM-5S2UB
60-69 years, male
766.4
GTEX-16YQH-0011-R8a-SM-7DUFB
30-39 years, male
762.3
GTEX-1R9K4-0011-R8b-SM-F649L
60-69 years, male
761.7
GTEX-12WSM-0011-R8a-SM-5DUWJ
60-69 years, male
761.5
GTEX-1QMI2-0011-R8a-SM-F3429
60-69 years, male
760.6
GTEX-1IDJH-0011-R8b-SM-ARZLL
70-79 years, male
759.5
GTEX-1RLM8-0011-R8a-SM-EYYXR
50-59 years, male
756.0
GTEX-1F6I4-0011-R8a-SM-9QEIA
60-69 years, male
753.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6
60-69 years, male
750.8
GTEX-13OW5-0011-R8a-SM-5L3GQ
60-69 years, male
749.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ
60-69 years, male
746.1
GTEX-15SHU-0011-R8a-SM-H6Q7V
40-49 years, female
744.7
GTEX-13OVJ-0011-R8b-SM-5L3FS
50-59 years, female
743.5
GTEX-1E1VI-0011-R8b-SM-ARU8E
50-59 years, male
743.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO
40-49 years, male
736.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE
40-49 years, female
736.5
GTEX-1LH75-0011-R8b-SM-F2TB2
50-59 years, female
734.6
GTEX-13FLV-0011-R8a-SM-5LZZE
50-59 years, male
733.6
GTEX-18465-0011-R8b-SM-7LG6O
50-59 years, male
729.0
GTEX-S7SE-0011-R8A-SM-F649T
50-59 years, male
727.5
GTEX-17HG3-0011-R8a-SM-79OK7
30-39 years, female
727.3
GTEX-14BMV-0011-R8a-SM-G9ERM
50-59 years, male
725.9
GTEX-QVJO-0011-R8A-SM-447C7
60-69 years, female
725.5
GTEX-13OW7-0011-R8b-SM-5L3HR
50-59 years, male
724.2
GTEX-13X6K-0011-R8b-SM-5PNZ4
60-69 years, female
723.9
GTEX-1LVAO-0011-R8a-SM-F3K5J
60-69 years, male
719.9
GTEX-QVUS-0011-R8A-SM-3GAD7
60-69 years, female
718.6
GTEX-12ZZX-0011-R8a-SM-5DUW8
40-49 years, female
718.4
GTEX-1QEPI-0011-R8a-SM-G8LLI
60-69 years, female
715.4
GTEX-13CF2-0011-R8b-SM-5IJCX
60-69 years, male
714.9
GTEX-1H3O1-0011-R8a-SM-CL555
60-69 years, male
713.9
GTEX-14DAQ-0011-R8a-SM-G9ERP
60-69 years, female
713.4
GTEX-1EMGI-0011-R8b-SM-9QEID
60-69 years, male
713.3
GTEX-1LVA9-0011-R8a-SM-F3K5G
50-59 years, male
711.2
GTEX-15DYW-0011-R8b-SM-GRR3B
60-69 years, female
710.5
GTEX-15DCD-0011-R8b-SM-7KUEF
70-79 years, female
707.1
GTEX-WHSE-0011-R8A-SM-3P5Z1
20-29 years, male
706.9
GTEX-1CB4G-0011-R8b-SM-9WG7H
60-69 years, male
705.2
GTEX-1MCQQ-0011-R8b-SM-F341H
60-69 years, male
705.2
GTEX-11EMC-0011-R8b-SM-DO91Z
60-69 years, female
704.6
GTEX-1HSKV-0011-R8a-SM-CL54X
60-69 years, male
704.4
GTEX-1HB9E-0011-R8b-SM-A9G1O
50-59 years, male
703.4
GTEX-16NPV-0011-R8a-SM-7EPH8
50-59 years, female
691.8
GTEX-11ONC-0011-R8b-SM-5NQ87
60-69 years, male
690.3
GTEX-16XZZ-0011-R8b-SM-7LT8S
60-69 years, male
686.8
GTEX-PWO3-0011-R8A-SM-2I5GD
60-69 years, female
686.5
GTEX-12WSD-0011-R8b-SM-9QEGI
60-69 years, female
686.1
GTEX-13X6J-0011-R8b-SM-5PNUA
50-59 years, male
685.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG
60-69 years, female
685.1
GTEX-RVPV-0011-R8A-SM-F21II
60-69 years, male
679.4
GTEX-11WQC-0011-R8b-SM-57WCH
60-69 years, male
679.1
GTEX-1HCU6-0011-R8a-SM-CJI3R
60-69 years, female
678.5
GTEX-ZXG5-0011-R8a-SM-57WD1
60-69 years, male
678.2
GTEX-15RJE-0011-R8a-SM-H7OGM
40-49 years, male
675.9
GTEX-1GTWX-0011-R8a-SM-CE6RM
60-69 years, male
674.1
GTEX-16Z82-0011-R8a-SM-7DUEX
60-69 years, male
672.6
GTEX-1POEN-0011-R8b-SM-F647O
30-39 years, female
670.6
GTEX-13OVL-0011-R8a-SM-5L3HH
50-59 years, male
668.1
GTEX-1I1HK-0011-R8b-SM-E8VN9
60-69 years, male
667.9
GTEX-T5JC-0011-R8A-SM-32PLM
20-29 years, male
662.3
GTEX-XMD1-0011-R8A-SM-4AT48
60-69 years, male
662.1
GTEX-14753-0011-R8b-SM-5S2U1
60-69 years, male
659.1
GTEX-13OW6-0011-R8a-SM-5L3GF
50-59 years, male
657.9
GTEX-ZUA1-0011-R8b-SM-51MST
40-49 years, male
657.9
GTEX-14C5O-0011-R8a-SM-5YYAG
60-69 years, male
654.0
GTEX-ZDXO-0011-R8a-SM-4WWD7
60-69 years, male
653.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW
50-59 years, male
651.9
GTEX-1I1GS-0011-R8b-SM-CKZPE
60-69 years, male
650.9
GTEX-YJ89-0011-R8b-SM-4SOK8
60-69 years, male
650.4
GTEX-11ZU8-0011-R8b-SM-GHWOM
60-69 years, male
648.4
GTEX-1C64N-0011-R8b-SM-7MGXE
50-59 years, male
646.7
GTEX-1GN2E-0011-R8a-SM-CE6RK
60-69 years, male
645.1
GTEX-1RDX4-0011-R8a-SM-G8LLT
50-59 years, female
644.7
GTEX-1F48J-0011-R8a-SM-9OSWW
50-59 years, female
644.1
GTEX-1BAJH-0011-R8a-SM-7MXUB
70-79 years, male
644.0
GTEX-1R46S-0011-R8a-SM-F3K4Q
60-69 years, female
643.8
GTEX-1JJEA-0011-R8a-SM-F3419
60-69 years, male
643.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT
50-59 years, male
642.9
GTEX-1OJC4-0011-R8a-SM-F3K5B
50-59 years, female
641.8
GTEX-ZVT3-0011-R8b-SM-57WDJ
60-69 years, female
640.3
GTEX-1GF9W-0011-R8b-SM-9QEIR
60-69 years, male
640.1
GTEX-1KANB-0011-R8a-SM-F3K5N
50-59 years, male
638.2
GTEX-1LKK1-0011-R8a-SM-F341O
50-59 years, female
633.3
GTEX-1GN1V-0011-R8a-SM-CKZNV
60-69 years, male
632.6
GTEX-11GSP-0011-R8b-SM-5NQ79
60-69 years, female
632.0
GTEX-11ZTS-0011-R8a-SM-57WDI
60-69 years, female
629.8
GTEX-13O3O-0011-R8b-SM-5LUAL
60-69 years, female
629.8
GTEX-OXRN-0011-R8A-SM-E9TI1
50-59 years, male
629.6
GTEX-1HBPH-0011-R8b-SM-CL556
40-49 years, female
624.6
GTEX-145LS-0011-R8b-SM-5PNXA
60-69 years, female
622.5
GTEX-17EVP-0011-R8b-SM-7DUF9
40-49 years, male
618.9
GTEX-12WSA-0011-R8a-SM-5P9EX
60-69 years, male
615.5
GTEX-1N5O9-0011-R8a-SM-F649C
60-69 years, male
614.8
GTEX-ZAB4-0011-R8b-SM-4SOKF
40-49 years, male
609.1
GTEX-1KWVE-0011-R8a-SM-F3K4V
30-39 years, male
602.2
GTEX-1E2YA-0011-R8a-SM-CKZNG
50-59 years, male
598.6
GTEX-14BIL-0011-R8b-SM-69LQK
50-59 years, male
598.0
GTEX-1QP6S-0011-R8a-SM-F649M
40-49 years, male
597.5
GTEX-17F97-0011-R8a-SM-7DUET
50-59 years, male
596.6
GTEX-13G51-0011-R8b-SM-5LZZ4
60-69 years, male
595.5
GTEX-1CB4H-0011-R8b-SM-CJI26
60-69 years, female
595.3
GTEX-13X6I-0011-R8a-SM-5PNZF
60-69 years, male
594.8
GTEX-12696-0011-R8a-SM-GINAP
60-69 years, male
592.1
GTEX-14PJO-0011-R8a-SM-6AJAL
60-69 years, male
592.0
GTEX-14PQA-0011-R8b-SM-6AJAB
50-59 years, female
591.6
GTEX-WVLH-0011-R8A-SM-3MJFC
50-59 years, male
588.3
GTEX-13QJC-0011-R8b-SM-5S2U6
60-69 years, female
586.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA
70-79 years, male
584.4
GTEX-1H1CY-0011-R8b-SM-CJI31
60-69 years, female
584.1
GTEX-14PN4-0011-R8a-SM-6EU1H
50-59 years, male
583.3
GTEX-16GPK-0011-R8a-SM-79OMQ
60-69 years, male
580.6
GTEX-X4XY-0011-R8A-SM-46MVC
60-69 years, male
578.1
GTEX-13112-0011-R8b-SM-664OV
50-59 years, male
575.3
GTEX-1H1DG-0011-R8a-SM-CL54Z
70-79 years, male
569.4
GTEX-QMR6-0011-R8A-SM-32PKJ
50-59 years, male
563.7
GTEX-1N2EF-0011-R8a-SM-F6481
60-69 years, male
563.4
GTEX-14E7W-0011-R8b-SM-GQ1D6
70-79 years, male
559.6
GTEX-11H98-0011-R8a-SM-5NQ8V
50-59 years, male
558.2
GTEX-132Q8-0011-R8b-SM-5DUWX
60-69 years, male
557.2
GTEX-1B996-0011-R8b-SM-79OOS
60-69 years, male
549.7
GTEX-13OW8-0011-R8a-SM-5L3G5
60-69 years, male
546.6
GTEX-1JMQK-0011-R8a-SM-G8LMS
60-69 years, male
546.0
GTEX-13JVG-0011-R8a-SM-5KM3E
60-69 years, male
540.6
GTEX-1477Z-0011-R8b-SM-5S2RG
60-69 years, male
538.8
GTEX-1GZHY-0011-R8b-SM-9OSWK
50-59 years, female
532.8
GTEX-147F4-0011-R8b-SM-5S2UN
50-59 years, male
532.4
GTEX-1HBPI-0011-R8a-SM-A9G1S
50-59 years, male
521.7
GTEX-1IKOH-0011-R8a-SM-A9SKG
60-69 years, female
516.4
GTEX-N7MS-0011-R8a-SM-2YUMK
60-69 years, male
506.6
GTEX-131XW-0011-R8a-SM-5DUWY
50-59 years, female
502.8
GTEX-1RAZS-0011-R8a-SM-F2TBI
50-59 years, male
479.1
GTEX-1JMPZ-0011-R8b-SM-F341A
30-39 years, male
476.6
GTEX-1445S-0011-R8a-SM-5PNWX
60-69 years, male
475.7
GTEX-11TTK-0011-R8b-SM-DO111
60-69 years, female
460.9
GTEX-1CB4J-0011-R8a-SM-9QEHU
60-69 years, male
434.2
GTEX-1CAV2-0011-R8a-SM-GRR24
40-49 years, female
425.0
GTEX-1JN6P-0011-R8a-SM-F6499
60-69 years, male
422.2
GTEX-QDT8-0011-R8A-SM-G8W63
30-39 years, female
419.8
GTEX-11WQK-0011-R8a-SM-5BC7C
50-59 years, male
383.4
GTEX-1CAMQ-0011-R8a-SM-ARU85
40-49 years, male
378.6
GTEX-1H23P-0011-R8b-SM-A9G1G
60-69 years, male
305.6
GTEX-1PWST-0011-R8a-SM-F3K5P
70-79 years, male
264.1
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HYPOTHALAMUS - Macaque RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
225.1
Macaque sample
Sample description
nTPM
Preoptic area nTPM: 225.1
Samples: 1
Max nTPM: 225.1
Min nTPM: 225.1
Sample A
225.1
HYPOTHALAMUS - Pig RNA-seqi
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
168.3
Pig sample
Sample description
nTPM
Hypothalamus nTPM: 168.3
Samples: 4
Max nTPM: 209.0
Min nTPM: 147.9
Sample A
Female
209.0
Sample B
Female
168.2
Sample C
Male
148.0
Sample D
Male
147.9
HYPOTHALAMUS - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
107.6
Mouse sample
Sample description
nTPM
Hypothalamus nTPM: 107.6
Samples: 4
Max nTPM: 113.7
Min nTPM: 103.3
Sample A
105.3
Sample B
113.7
Sample C
108.2
Sample D
103.3
HYPOTHALAMUS - Rat RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
256.1
Rat sample
Sample description
nTPM
Hypothalamus nTPM: 256.1
Samples: 4
Max nTPM: 263.3
Min nTPM: 246.2
Sample A
263.3
Sample A
253.5
Sample A
246.2
Sample A
261.2
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The Human Protein Atlas project is funded
