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  • SUMMARY

  • TISSUE

  • BRAIN

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  • RPL6
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:683.6 nTPM
HPA Brain:422.9 nTPM
GTEx:683.6 nTPM
Pig:755.0 nTPM
Mouse:533.9 nTPM
Allen mouse:18.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

422.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 348.6
1961 Female, age 42, unknown 385.9
2226 Male, age 75, left hemisphere 311.4
Dorsomedial nucleus
nTPM: 326.5
2041 Female, age 72, unknown 352.2
2017 Female, age 42, unknown 341.7
1989 Male, age 62, unknown 285.4
Lateral hypothalamic area
nTPM: 374.1
2228 Male, age 66, unknown 397.6
1791 Male, age 80, right hemisphere 377.5
2412 Male, age 62, unknown 370.8
2271 Male, age 75, both hemispheres 350.4
Mammillary body
nTPM: 366.5
1948 Female, age 72, unknown 404.0
1923 Female, age 72, unknown 374.1
1834 Female, age 42, unknown 358.3
1945 Male, age 80, right hemisphere 357.7
2413 Male, age 66, unknown 338.5
Paraventricular nucleus
nTPM: 369.9
2700 Male, age 62, unknown 369.9
Preoptic area
nTPM: 339.2
1861 Female, age 42, unknown 384.3
1907 Male, age 80, right hemisphere 325.5
2414 Female, age 72, unknown 307.7
Supraoptic nucleus
nTPM: 422.9
2835 Female, age 72, unknown 438.1
2043 Male, age 62, unknown 417.5
1894 Female, age 72, unknown 413.2
Ventromedial nucleus
nTPM: 399.3
1982 Female, age 72, unknown 433.3
1822 Female, age 42, unknown 365.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

683.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 683.6
Samples: 257

Max nTPM: 1743.4
Min nTPM: 408.1
Std nTPM: 182.5
Median nTPM: 638.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1743.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1517.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1243.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1240.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1240.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1219.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1195.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1163.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1119.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1119.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1109.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1074.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1035.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1032.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1013.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1006.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1003.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 981.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 974.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 972.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 946.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 943.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 910.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 903.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 902.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 893.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 881.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 873.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 869.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 862.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 855.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 850.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 833.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 818.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 818.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 813.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 813.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 811.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 811.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 810.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 807.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 806.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 801.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 800.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 799.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 797.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 797.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 796.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 792.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 790.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 790.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 786.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 776.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 774.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 774.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 773.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 770.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 767.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 766.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 765.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 764.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 757.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 756.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 754.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 753.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 751.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 751.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 751.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 750.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 749.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 748.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 745.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 745.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 744.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 737.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 737.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 735.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 735.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 732.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 732.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 731.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 730.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 729.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 726.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 723.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 723.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 721.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 720.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 720.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 719.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 715.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 712.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 712.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 708.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 707.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 707.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 705.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 702.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 702.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 695.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 695.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 694.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 690.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 688.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 687.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 686.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 683.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 680.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 680.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 679.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 677.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 666.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 665.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 665.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 664.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 660.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 659.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 655.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 655.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 654.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 654.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 653.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 649.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 648.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 647.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 647.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 643.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 642.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 638.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 638.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 637.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 637.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 636.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 636.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 635.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 634.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 633.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 633.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 632.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 629.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 629.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 629.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 628.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 628.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 628.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 621.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 621.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 620.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 620.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 619.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 619.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 617.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 616.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 614.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 614.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 614.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 606.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 605.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 602.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 602.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 599.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 598.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 598.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 597.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 596.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 596.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 595.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 595.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 593.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 593.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 593.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 587.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 587.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 587.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 586.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 586.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 580.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 579.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 577.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 574.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 574.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 572.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 571.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 570.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 568.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 567.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 567.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 566.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 566.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 566.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 561.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 560.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 559.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 557.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 557.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 555.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 553.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 553.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 552.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 551.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 550.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 546.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 545.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 545.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 545.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 544.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 541.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 541.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 540.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 539.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 536.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 536.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 535.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 535.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 534.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 533.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 532.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 531.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 530.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 529.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 526.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 525.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 524.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 524.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 523.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 519.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 517.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 514.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 514.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 511.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 511.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 506.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 505.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 503.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 500.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 498.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 497.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 497.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 496.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 496.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 495.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 485.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 479.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 478.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 470.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 470.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 468.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 468.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 467.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 461.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 460.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 457.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 433.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 426.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 414.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 410.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 408.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

755.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 755.0
Samples: 4

Max nTPM: 991.0
Min nTPM: 544.0
Sample A Female 991.0
Sample B Female 773.6
Sample C Male 711.4
Sample D Male 544.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

533.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 533.9
Samples: 4

Max nTPM: 592.6
Min nTPM: 496.4
Sample A Male 527.1
Sample B Male 592.6
Sample C Female 519.4
Sample D Female 496.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.5
69818317 Antisense, RP_050510_04_H04, Mouse strain C57BL/6J (56 days, male) 18.5

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