HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:259.3 nTPM
HPA Brain:264.2 nTPM
GTEx:259.3 nTPM
FANTOM5:21.5 Scaled Tags Per Million
Pig:277.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051075Antibody CAB005223Antibody CAB075755Antibody CAB075756
Glial cells Not detectedHighLowNot detected
Neuronal cells HighHighHighMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 264.2
Sample id Sample description nTPM
Hippocampus
nTPM: 247.5
1898 Male, age 80, left hemisphere 274.7
1855 Male, age 76, left hemisphere 250.4
1911 Female, age 85, right hemisphere 247.6
2529 Female, age 94, left hemisphere 242.7
2621 Female, age 67, right hemisphere 241.8
2148 Female, age 91, left hemisphere 228.0
Dentate gyrus
nTPM: 243.5
2010 Male, age 76, both hemispheres 283.3
2246 Female, age 85, both hemispheres 254.2
2530 Female, age 94, left hemisphere 249.4
1927 Female, age 91, both hemispheres 245.2
2528 Male, age 74, both hemispheres 218.6
2531 Female, age 67, both hemispheres 210.6
Entorhinal gyrus
nTPM: 224.6
2117 Female, age 91, right hemisphere 253.3
1938 Female, age 85, left hemisphere 253.2
1787 Male, age 76, left hemisphere 234.7
2764 Male, age 80, right hemisphere 226.2
2686 Male, age 75, right hemisphere 209.3
2613 Female, age 94, left hemisphere 170.5
Hippocampus, CA1
nTPM: 264.2
2749 Male, age 80, left hemisphere 305.0
2045 Male, age 76, both hemispheres 277.1
1873 Female, age 85, both hemispheres 263.9
2527 Male, age 74, both hemispheres 240.9
2082 Female, age 91, right hemisphere 234.2
Hippocampus, CA2
nTPM: 234.7
2249 Male, age 74, both hemispheres 256.1
1892 Male, age 76, both hemispheres 249.8
1963 Male, age 80, left hemisphere 246.5
1940 Female, age 85, left hemisphere 226.7
2113 Female, age 91, right hemisphere 220.7
2437 Female, age 94, left hemisphere 208.2
Hippocampus, CA3
nTPM: 226.2
2137 Male, age 80, left hemisphere 287.8
1867 Male, age 76, both hemispheres 250.4
1891 Female, age 85, both hemispheres 247.0
2436 Male, age 74, both hemispheres 217.3
2620 Female, age 94, left hemisphere 185.9
2861 Female, age 67, both hemispheres 169.1
Parahippocampal cortex
nTPM: 225.3
2018 Male, age 76, both hemispheres 259.9
1850 Male, age 80, both hemispheres 248.8
1933 Female, age 85, both hemispheres 246.0
2245 Female, age 91, both hemispheres 239.9
2532 Female, age 72, left hemisphere 235.5
2250 Female, age 67, right hemisphere 234.2
1990 Female, age 91, right hemisphere 228.5
2692 Male, age 74, both hemispheres 199.3
2693 Female, age 94, both hemispheres 184.7
2622 Female, age 67, right hemisphere 176.7
Perirhinal gyrus
nTPM: 236.1
1847 Female, age 91, left hemisphere 254.3
1794 Male, age 80, right hemisphere 252.9
1841 Female, age 85, right hemisphere 243.8
2521 Female, age 94, right hemisphere 215.0
2848 Male, age 76, right hemisphere 214.6
Subiculum
nTPM: 242.9
2042 Male, age 76, both hemispheres 261.9
1977 Female, age 85, both hemispheres 258.4
1901 Male, age 80, both hemispheres 252.5
2438 Female, age 94, left hemisphere 251.3
2729 Female, age 91, right hemisphere 221.8
2619 Male, age 74, both hemispheres 211.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 259.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 259.3
Samples: 255

Max nTPM: 419.5
Min nTPM: 137.5
Std nTPM: 38.0
Median nTPM: 257.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 419.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 400.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 365.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 353.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 344.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 343.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 339.5
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 339.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 335.9
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 332.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 330.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 21.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.5
FF:10169-103B7 60 years, female 24.9
FF:10153-102I9 76 years, female 18.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 277.6
Pig sample Sample description nTPM
Subiculum
nTPM: 242.3
Samples: 4

Max nTPM: 279.0
Min nTPM: 218.6
Sample A Female 279.0
Sample B Female 232.4
Sample C Male 218.6
Sample D Male 239.0
Dorsal hippocampus
nTPM: 277.6
Samples: 4

Max nTPM: 354.4
Min nTPM: 215.3
Sample A Female 354.4
Sample B Female 264.8
Sample C Male 276.0
Sample D Male 215.3
Entorhinal cortex
nTPM: 219.1
Samples: 4

Max nTPM: 238.9
Min nTPM: 188.0
Sample A Female 221.6
Sample B Female 238.9
Sample C Male 227.7
Sample D Male 188.0
Ventral hippocampus
nTPM: 246.6
Samples: 4

Max nTPM: 294.7
Min nTPM: 215.8
Sample A Female 294.7
Sample B Female 215.8
Sample C Male 231.6
Sample D Male 244.3

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