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  • SUMMARY

  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:249.0 nTPM
HPA Brain:301.0 nTPM
GTEx:249.0 nTPM
Pig:255.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

301.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 261.0
2226 Male, age 75, left hemisphere 277.5
1961 Female, age 42, unknown 244.5
Dorsomedial nucleus
nTPM: 247.8
2041 Female, age 72, unknown 272.9
2017 Female, age 42, unknown 241.0
1989 Male, age 62, unknown 229.6
Lateral hypothalamic area
nTPM: 276.7
2228 Male, age 66, unknown 310.7
2271 Male, age 75, both hemispheres 286.8
1791 Male, age 80, right hemisphere 275.1
2412 Male, age 62, unknown 234.4
Mammillary body
nTPM: 271.7
1834 Female, age 42, unknown 287.3
1923 Female, age 72, unknown 280.3
1945 Male, age 80, right hemisphere 276.1
1948 Female, age 72, unknown 267.9
2413 Male, age 66, unknown 246.7
Paraventricular nucleus
nTPM: 291.7
2700 Male, age 62, unknown 291.7
Preoptic area
nTPM: 249.8
2414 Female, age 72, unknown 259.5
1861 Female, age 42, unknown 251.3
1907 Male, age 80, right hemisphere 238.7
Supraoptic nucleus
nTPM: 301.0
1894 Female, age 72, unknown 346.8
2043 Male, age 62, unknown 296.5
2835 Female, age 72, unknown 259.8
Ventromedial nucleus
nTPM: 263.7
1982 Female, age 72, unknown 266.6
1822 Female, age 42, unknown 260.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

249.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 249.0
Samples: 257

Max nTPM: 411.0
Min nTPM: 177.8
Std nTPM: 40.4
Median nTPM: 242.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 411.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 395.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 368.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 367.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 362.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 352.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 348.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 347.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 341.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 340.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 340.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 330.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 329.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 328.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 328.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 326.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 323.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 322.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 321.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 317.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 317.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 316.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 315.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 312.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 311.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 305.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 305.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 303.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 302.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 300.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 300.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 299.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 297.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 296.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 296.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 294.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 293.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 291.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 291.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 291.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 290.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 289.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 287.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 285.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 281.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 280.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 280.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 280.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 279.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 278.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 275.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 274.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 272.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 272.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 271.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 271.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 268.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 268.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 268.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 267.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 267.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 266.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 265.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 264.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 263.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 262.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 262.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 261.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 259.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 259.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 259.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 259.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 259.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 259.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 258.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 258.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 257.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 257.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 256.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 256.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 256.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 256.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 256.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 255.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 255.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 255.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 254.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 254.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 254.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 253.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 253.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 253.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 253.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 252.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 252.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 252.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 251.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 251.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 251.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 250.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 250.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 249.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 249.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 249.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 249.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 248.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 248.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 248.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 247.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 247.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 247.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 247.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 246.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 246.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 246.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 245.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 245.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 245.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 245.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 245.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 244.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 244.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 244.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 244.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 243.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 243.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 242.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 242.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 242.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 241.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 240.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 240.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 240.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 240.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 240.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 239.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 239.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 239.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 239.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 239.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 238.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 238.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 237.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 237.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 237.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 237.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 237.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 236.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 236.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 236.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 235.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 235.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 235.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 235.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 234.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 234.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 234.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 233.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 233.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 232.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 232.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 232.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 232.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 232.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 231.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 231.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 230.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 230.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 229.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 229.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 229.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 229.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 229.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 228.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 228.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 227.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 227.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 226.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 226.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 224.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 224.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 224.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 224.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 223.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 223.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 222.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 222.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 222.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 222.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 222.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 221.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 221.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 221.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 221.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 221.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 221.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 220.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 220.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 220.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 220.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 220.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 219.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 219.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 219.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 218.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 218.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 217.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 217.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 217.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 217.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 217.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 216.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 216.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 215.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 215.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 215.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 214.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 214.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 214.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 213.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 212.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 212.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 211.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 211.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 210.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 210.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 209.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 207.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 207.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 207.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 207.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 207.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 206.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 205.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 203.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 202.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 201.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 201.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 201.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 200.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 199.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 198.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 198.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 196.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 195.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 193.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 191.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 191.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 189.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 185.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 183.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 182.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 181.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 180.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 180.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 178.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 177.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

255.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 255.8
Samples: 4

Max nTPM: 331.7
Min nTPM: 201.3
Sample A Female 331.7
Sample B Female 258.3
Sample C Male 231.8
Sample D Male 201.3

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