HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni
Consensus:159.7 nTPM
HPA Brain:921.0 nTPM
GTEx:159.7 nTPM
FANTOM5:999.2 Scaled Tags Per Million
Pig:638.8 nTPM
Mouse:56.8 nTPM
Allen mouse:14.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002381Antibody CAB018719
Glial cells HighMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 921.0
Sample id Sample description nTPM
Hippocampus
nTPM: 807.5
1898 Male, age 80, left hemisphere 895.3
2529 Female, age 94, left hemisphere 874.8
2148 Female, age 91, left hemisphere 830.2
1911 Female, age 85, right hemisphere 774.3
2621 Female, age 67, right hemisphere 747.3
1855 Male, age 76, left hemisphere 722.9
Dentate gyrus
nTPM: 792.0
2530 Female, age 94, left hemisphere 980.2
2528 Male, age 74, both hemispheres 850.6
2010 Male, age 76, both hemispheres 823.2
2246 Female, age 85, both hemispheres 745.7
1927 Female, age 91, both hemispheres 726.3
2531 Female, age 67, both hemispheres 626.3
Entorhinal gyrus
nTPM: 921.0
2117 Female, age 91, right hemisphere 1165.9
2764 Male, age 80, right hemisphere 1068.4
1938 Female, age 85, left hemisphere 917.7
1787 Male, age 76, left hemisphere 846.8
2613 Female, age 94, left hemisphere 820.6
2686 Male, age 75, right hemisphere 706.7
Hippocampus, CA1
nTPM: 777.9
2749 Male, age 80, left hemisphere 884.1
2527 Male, age 74, both hemispheres 831.9
1873 Female, age 85, both hemispheres 802.8
2082 Female, age 91, right hemisphere 754.1
2045 Male, age 76, both hemispheres 616.5
Hippocampus, CA2
nTPM: 844.8
1963 Male, age 80, left hemisphere 959.5
2249 Male, age 74, both hemispheres 930.1
2437 Female, age 94, left hemisphere 818.6
2113 Female, age 91, right hemisphere 817.2
1940 Female, age 85, left hemisphere 798.5
1892 Male, age 76, both hemispheres 745.0
Hippocampus, CA3
nTPM: 718.9
1891 Female, age 85, both hemispheres 837.2
2137 Male, age 80, left hemisphere 740.0
2620 Female, age 94, left hemisphere 734.7
1867 Male, age 76, both hemispheres 725.6
2436 Male, age 74, both hemispheres 687.7
2861 Female, age 67, both hemispheres 588.3
Parahippocampal cortex
nTPM: 815.9
1850 Male, age 80, both hemispheres 936.9
1990 Female, age 91, right hemisphere 931.4
2532 Female, age 72, left hemisphere 919.0
2245 Female, age 91, both hemispheres 843.0
1933 Female, age 85, both hemispheres 842.0
2250 Female, age 67, right hemisphere 813.8
2692 Male, age 74, both hemispheres 805.9
2018 Male, age 76, both hemispheres 747.3
2693 Female, age 94, both hemispheres 664.2
2622 Female, age 67, right hemisphere 655.6
Perirhinal gyrus
nTPM: 855.3
1794 Male, age 80, right hemisphere 933.2
1847 Female, age 91, left hemisphere 919.5
1841 Female, age 85, right hemisphere 856.7
2521 Female, age 94, right hemisphere 804.0
2848 Male, age 76, right hemisphere 763.4
Subiculum
nTPM: 883.8
1977 Female, age 85, both hemispheres 975.5
2619 Male, age 74, both hemispheres 900.9
1901 Male, age 80, both hemispheres 892.4
2438 Female, age 94, left hemisphere 856.5
2042 Male, age 76, both hemispheres 842.1
2729 Female, age 91, right hemisphere 835.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 159.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 159.7
Samples: 255

Max nTPM: 278.2
Min nTPM: 57.8
Std nTPM: 33.9
Median nTPM: 155.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 278.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 268.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 252.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 249.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 249.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 247.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 237.9
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 232.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 231.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 228.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 222.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 999.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 999.2
FF:10153-102I9 76 years, female 1007.6
FF:10169-103B7 60 years, female 990.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 638.8
Pig sample Sample description nTPM
Subiculum
nTPM: 556.3
Samples: 4

Max nTPM: 678.6
Min nTPM: 476.6
Sample A Female 678.6
Sample B Female 531.8
Sample C Male 538.2
Sample D Male 476.6
Dorsal hippocampus
nTPM: 638.8
Samples: 4

Max nTPM: 840.6
Min nTPM: 377.0
Sample A Female 840.6
Sample B Female 621.9
Sample C Male 715.5
Sample D Male 377.0
Entorhinal cortex
nTPM: 488.7
Samples: 4

Max nTPM: 510.3
Min nTPM: 458.8
Sample A Female 507.8
Sample B Female 477.7
Sample C Male 510.3
Sample D Male 458.8
Ventral hippocampus
nTPM: 569.1
Samples: 4

Max nTPM: 683.5
Min nTPM: 402.1
Sample A Female 587.7
Sample B Female 402.1
Sample C Male 683.5
Sample D Male 603.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 56.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.8
Samples: 4

Max nTPM: 67.8
Min nTPM: 48.9
Sample A Male 57.8
Sample B Male 52.5
Sample C Female 48.9
Sample D Female 67.8
Hippocampal formation
nTPM: 51.6
Samples: 4

Max nTPM: 58.4
Min nTPM: 45.6
Sample A Male 47.9
Sample B Male 54.4
Sample C Female 58.4
Sample D Female 45.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.6
74510104 Antisense, RP_060208_01_A08, Mouse strain C57BL/6J (56 days, male) 14.6

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