On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
143.2
nTPM
HPA Brain:
916.5
nTPM
GTEx:
143.2
nTPM
Macaque:
552.9
nTPM
Mouse:
449.9
nTPM
Rat:
317.9
nTPM
Pig:
567.8
nTPM
HYPOTHALAMUS - SINGLE NUCLEI RNA EXPRESSIONi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NEURONSi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Unassigned AVP+
c-2
Excitatory (VGLUT2) TAC1+
c-3
Inhibitory (GAD1/2) AVP+
c-4
Unassigned AVP+
c-5
Excitatory (VGLUT2)
c-6
Excitatory (VGLUT2)
c-7
Inhibitory (GAD1/2) DRD2+ L...
c-8
Inhibitory (GAD1/2) ESR1+
c-9
Excitatory (VGLUT2)
c-10
Excitatory (VGLUT2) TAC1+
c-11
Inhibitory (GAD1/2) ESR1+
c-12
Inhibitory (GAD1/2) DRD1+ L...
c-13
Excitatory (VGLUT2)
c-14
Inhibitory (GAD1/2)
c-15
Excitatory (VGLUT2)
c-16
Excitatory (VGLUT2)
c-17
Inhibitory (GAD1/2)
c-18
Inhibitory (GAD1/2) GAL+
c-19
Excitatory (VGLUT1)
c-20
Excitatory (VGLUT2) ESR1+
c-21
Inhibitory (GAD1/2) DRD1+ L...
c-22
Inhibitory (GAD1/2) RORB+ K
c-23
Inhibitory (GAD1/2) SST+ NP
c-24
Inhibitory (GAD1/2) CXCL14+
c-25
Excitatory (VGLUT2)
c-26
Inhibitory (GAD1/2)
c-27
Excitatory (VGLUT2)
c-28
Unassigned
c-29
Inhibitory (GAD1/2) ESR1+
c-30
Excitatory (VGLUT2)
c-31
Excitatory (VGLUT1/2)
c-32
Inhibitory (GAD1/2) GAL+
c-33
Excitatory (VGLUT2)
c-34
Monoaminergic Inhibitory (G...
c-35
Excitatory (VGLUT2) TAC1+
c-36
Inhibitory (GAD1/2) LHX6+ T...
c-37
Excitatory (VGLUT2)
c-38
Inhibitory (GAD1/2) SST+
c-39
Inhibitory (GAD1/2) MEIS2+
c-40
Unassigned
c-41
Inhibitory (GAD1/2) SST+
c-42
Excitatory (VGLUT1)
c-43
Excitatory (VGLUT2) TAC1+
c-44
Unassigned AVP+
c-45
Inhibitory (GAD1/2) LAMP5+ ...
c-46
Excitatory (VGLUT2)
c-47
Inhibitory (GAD1/2) LHX6+ T...
c-48
Parvocellular CRH+ AVP+ OXT
c-49
Magnocellular TH+ AVP+ OXT+
c-50
Excitatory (VGLUT1)
c-51
Parvocellular (VGLUT2) AVP...
c-52
Inhibitory (GAD1/2) NOS1+ M...
c-53
Inhibitory (GAD1/2) TAC1+ D...
c-54
Inhibitory (GAD1/2) SST+
c-55
Excitatory (VGLUT1)
c-56
Excitatory (VGLUT1) ETV1+ Z...
c-57
HCRT+ RXF4+
c-58
Excitatory (VGLUT1/2) TAC1+
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NON-NEURONALi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Oligodendrocytes
c-2
Oligodendrocytes
c-3
Oligodendrocytes
c-4
Astrocytes (LHX2+)
c-5
Microglia
c-6
Oligodendrocytes
c-7
Astrocytes (CD44+)
c-8
Oligodendrocytes
c-9
Oligodendrocyte progenitor ...
c-10
Microglia
c-11
Oligodendrocytes
c-12
Astrocytes
c-13
Astrocytes (CD44+)
c-14
Oligodendrocyte progenitor ...
c-15
Oligodendrocyte progenitor ...
c-16
Microglia
c-17
Oligodendrocytes
c-18
Oligodendrocyte progenitor ...
c-19
Astrocytes
c-20
Fibroblasts
c-21
Oligodendrocytes
c-22
Oligodendrocytes
c-23
Ependymal cells
c-24
Vascular endothelial cells
c-25
Astrocytes (LHX2+)
c-26
Macrophages
c-27
Astrocytes
c-28
T-cells
c-29
Vascular smooth muscle cell
c-30
Fibroblasts (BNC2+ KCNMA1+ ...
c-31
Pericytes
c-32
Oligodendrocyte progenitor ...
c-33
Immature oligodendrocytes
c-34
Oligodendrocyte progenitor ...
c-35
NK-cells
c-36
Mural cells
c-37
Monocytes
c-38
Fibroblasts (BNC2+ TRPM3+)
c-39
Lymphocytes
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
916.5
Sample id
Sample description
nTPM
Arcuate nucleus nTPM: 548.6
1961
Female, age 42, unknown
557.1
2226
Male, age 75, left hemisphere
540.1
Dorsomedial nucleus nTPM: 728.1
1989
Male, age 62, unknown
820.4
2017
Female, age 42, unknown
761.4
2041
Female, age 72, unknown
602.3
Lateral hypothalamic area nTPM: 818.1
2271
Male, age 75, both hemispheres
917.9
1791
Male, age 80, right hemisphere
902.2
2228
Male, age 66, unknown
868.5
2412
Male, age 62, unknown
584.0
Mammillary body nTPM: 916.5
1923
Female, age 72, unknown
982.3
1945
Male, age 80, right hemisphere
959.7
1948
Female, age 72, unknown
915.7
1834
Female, age 42, unknown
905.3
2413
Male, age 66, unknown
819.2
Paraventricular nucleus nTPM: 739.9
2700
Male, age 62, unknown
739.9
Preoptic area nTPM: 786.6
2414
Female, age 72, unknown
904.3
1861
Female, age 42, unknown
746.9
1907
Male, age 80, right hemisphere
708.6
Supraoptic nucleus nTPM: 793.6
2043
Male, age 62, unknown
919.1
1894
Female, age 72, unknown
824.8
2835
Female, age 72, unknown
637.0
Ventromedial nucleus nTPM: 663.0
1982
Female, age 72, unknown
778.2
1822
Female, age 42, unknown
547.9
HYPOTHALAMUS - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
143.2
GTEx sample id
Sample description
nTPM
Brain - Hypothalamus Average nTPM: 143.2
Samples: 257
Max nTPM: 245.2
Min nTPM: 65.9
Std nTPM: 33.7
Median nTPM: 140.5
GTEX-WL46-0011-R8B-SM-H7OHG
50-59 years, male
245.2
GTEX-1A8G6-0011-R8a-SM-7P8PD
60-69 years, male
244.9
GTEX-1PWST-0011-R8a-SM-F3K5P
70-79 years, male
244.0
GTEX-1HB9E-0011-R8b-SM-A9G1O
50-59 years, male
241.6
GTEX-11ZUS-0011-R8a-SM-5BC73
30-39 years, male
230.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4
60-69 years, male
228.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E
60-69 years, male
219.3
GTEX-1GN1U-0011-R8a-SM-CL537
50-59 years, female
218.8
GTEX-WWYW-0011-R8A-SM-3NB3S
50-59 years, female
216.6
GTEX-1HBPH-0011-R8b-SM-CL556
40-49 years, female
215.3
GTEX-131XH-0011-R8a-SM-5EGLL
50-59 years, male
213.8
GTEX-1H3O1-0011-R8a-SM-CL555
60-69 years, male
206.0
GTEX-1B8L1-0011-R8b-SM-7P8ST
60-69 years, male
205.9
GTEX-N7MS-0011-R8a-SM-2YUMK
60-69 years, male
205.4
GTEX-12WSA-0011-R8a-SM-5P9EX
60-69 years, male
198.7
GTEX-13QIC-0011-R8b-SM-5O9CV
60-69 years, female
198.2
GTEX-1IY9M-0011-R8a-SM-EYYWW
60-69 years, male
196.9
GTEX-11H98-0011-R8a-SM-5NQ8V
50-59 years, male
196.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE
40-49 years, female
194.2
GTEX-1LSNL-0011-R8b-SM-F2TAH
50-59 years, male
193.8
GTEX-12WSD-0011-R8b-SM-9QEGI
60-69 years, female
192.6
GTEX-1B933-0011-R8a-SM-9QEGX
50-59 years, female
192.4
GTEX-RVPV-0011-R8A-SM-F21II
60-69 years, male
191.2
GTEX-13NYB-0011-R8a-SM-5KM4R
40-49 years, male
187.8
GTEX-NPJ8-0011-R8a-SM-2HMLG
40-49 years, male
187.7
GTEX-Z93S-0011-R8a-SM-4RGNL
50-59 years, male
187.2
GTEX-1EMGI-0011-R8b-SM-9QEID
60-69 years, male
185.9
GTEX-1QEPI-0011-R8a-SM-G8LLI
60-69 years, female
184.8
GTEX-ZAB4-0011-R8b-SM-4SOKF
40-49 years, male
183.8
GTEX-1F75A-0011-R8a-SM-CL539
50-59 years, male
183.6
GTEX-P44H-0011-R8A-SM-2XCEL
40-49 years, male
182.3
GTEX-1F6IF-0011-R8a-SM-9OSX5
60-69 years, male
182.1
GTEX-13FLW-0011-R8b-SM-5J1MZ
50-59 years, male
181.9
GTEX-1RQED-0011-R8a-SM-G8LKO
60-69 years, male
181.6
GTEX-S7SE-0011-R8A-SM-F649T
50-59 years, male
180.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ
60-69 years, male
180.2
GTEX-117XS-0011-R8b-SM-GHWOD
60-69 years, male
179.5
GTEX-17EVP-0011-R8b-SM-7DUF9
40-49 years, male
178.7
GTEX-X585-0011-R8A-SM-46MUX
50-59 years, male
177.3
GTEX-15DCD-0011-R8b-SM-7KUEF
70-79 years, female
177.1
GTEX-WZTO-0011-R8A-SM-4E3II
40-49 years, male
177.1
GTEX-145LU-0011-R8b-SM-5PNZG
50-59 years, male
175.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C
50-59 years, male
174.0
GTEX-11TTK-0011-R8b-SM-DO111
60-69 years, female
172.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW
50-59 years, male
171.9
GTEX-1QP6S-0011-R8a-SM-F649M
40-49 years, male
171.8
GTEX-15CHQ-0011-R8b-SM-CNPO4
60-69 years, male
171.1
GTEX-13NYS-0011-R8a-SM-5MR5H
60-69 years, male
170.7
GTEX-1HT8W-0011-R8b-SM-CM2SX
30-39 years, male
170.2
GTEX-1F48J-0011-R8a-SM-9OSWW
50-59 years, female
169.8
GTEX-13CIG-0011-R8b-SM-5LZX5
50-59 years, male
169.3
GTEX-1LVAO-0011-R8a-SM-F3K5J
60-69 years, male
167.9
GTEX-13FLV-0011-R8a-SM-5LZZE
50-59 years, male
167.8
GTEX-17F97-0011-R8a-SM-7DUET
50-59 years, male
167.7
GTEX-ZAK1-0011-R8a-SM-H7OGE
50-59 years, female
167.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K
50-59 years, female
166.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO
40-49 years, male
166.4
GTEX-17HII-0011-R8a-SM-79OK6
50-59 years, male
166.3
GTEX-1P4AB-0011-R8a-SM-F341R
50-59 years, male
166.0
GTEX-ZYY3-0011-R8a-SM-H7OHF
60-69 years, female
166.0
GTEX-13X6I-0011-R8a-SM-5PNZF
60-69 years, male
165.8
GTEX-1NV5F-0011-R8b-SM-F647Z
60-69 years, female
165.8
GTEX-11DXY-0011-R8a-SM-DO11M
60-69 years, male
165.0
GTEX-15RJE-0011-R8a-SM-H7OGM
40-49 years, male
164.9
GTEX-NL4W-0011-R8a-SM-2I3G4
50-59 years, male
164.8
GTEX-15DYW-0011-R8b-SM-GRR3B
60-69 years, female
164.4
GTEX-15G19-0011-R8b-SM-7KUL1
60-69 years, male
164.4
GTEX-T6MN-0011-R8A-SM-32QP3
50-59 years, male
164.1
GTEX-1313W-0011-R8a-SM-5DUVM
50-59 years, female
163.7
GTEX-145MH-0011-R8a-SM-5PNUL
50-59 years, male
163.4
GTEX-1GN73-0011-R8b-SM-CKZNY
60-69 years, male
163.1
GTEX-14C5O-0011-R8a-SM-5YYAG
60-69 years, male
161.2
GTEX-YFC4-0011-R8a-SM-4SOK3
40-49 years, female
160.5
GTEX-13RTJ-0011-R8b-SM-5O9DL
60-69 years, male
159.7
GTEX-13SLX-0011-R8b-SM-5PNWZ
50-59 years, female
159.0
GTEX-1GMR8-0011-R8a-SM-CKZNX
50-59 years, female
158.1
GTEX-11DYG-0011-R8a-SM-DO93F
60-69 years, male
157.3
GTEX-13OW6-0011-R8a-SM-5L3GF
50-59 years, male
157.3
GTEX-PWO3-0011-R8A-SM-2I5GD
60-69 years, female
156.7
GTEX-16XZZ-0011-R8b-SM-7LT8S
60-69 years, male
156.2
GTEX-1CB4G-0011-R8b-SM-9WG7H
60-69 years, male
156.1
GTEX-14PJM-0011-R8b-SM-69LPD
50-59 years, female
155.6
GTEX-1H1DG-0011-R8a-SM-CL54Z
70-79 years, male
155.6
GTEX-13OW5-0011-R8a-SM-5L3GQ
60-69 years, male
154.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6
60-69 years, male
154.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT
50-59 years, male
154.1
GTEX-13N1W-0011-R8a-SM-5MR56
70-79 years, male
153.5
GTEX-1RLM8-0011-R8a-SM-EYYXR
50-59 years, male
152.8
GTEX-1E1VI-0011-R8b-SM-ARU8E
50-59 years, male
151.5
GTEX-1LSVX-0011-R8a-SM-F2TB3
60-69 years, male
151.5
GTEX-14PN4-0011-R8a-SM-6EU1H
50-59 years, male
151.1
GTEX-1B8SF-0011-R8b-SM-7P8SX
60-69 years, male
150.8
GTEX-14JIY-0011-R8a-SM-6AJAP
60-69 years, male
150.6
GTEX-QDT8-0011-R8A-SM-G8W63
30-39 years, female
150.5
GTEX-1A8G7-0011-R8a-SM-7P8S6
60-69 years, male
150.4
GTEX-13OW7-0011-R8b-SM-5L3HR
50-59 years, male
149.6
GTEX-WHSE-0011-R8A-SM-3P5Z1
20-29 years, male
149.5
GTEX-1RDX4-0011-R8a-SM-G8LLT
50-59 years, female
149.0
GTEX-145LS-0011-R8b-SM-5PNXA
60-69 years, female
148.9
GTEX-1F6I4-0011-R8a-SM-9QEIA
60-69 years, male
148.6
GTEX-11DXW-0011-R8a-SM-GIN8T
40-49 years, male
148.1
GTEX-11OF3-0011-R8b-SM-57WCS
60-69 years, male
147.9
GTEX-QMR6-0011-R8A-SM-32PKJ
50-59 years, male
147.8
GTEX-1B8SG-0011-R8b-SM-7IGNW
50-59 years, male
147.7
GTEX-16YQH-0011-R8a-SM-7DUFB
30-39 years, male
147.6
GTEX-11EMC-0011-R8b-SM-DO91Z
60-69 years, female
147.3
GTEX-13OVH-0011-R8b-SM-5MR35
70-79 years, male
147.3
GTEX-1N2EE-0011-R8a-SM-F3K4X
60-69 years, male
147.3
GTEX-X261-0011-R8A-SM-4E3I5
50-59 years, male
147.3
GTEX-RNOR-0011-R8A-SM-EZ6MN
50-59 years, female
147.2
GTEX-13OVL-0011-R8a-SM-5L3HH
50-59 years, male
146.9
GTEX-1GF9W-0011-R8b-SM-9QEIR
60-69 years, male
146.9
GTEX-1LH75-0011-R8b-SM-F2TB2
50-59 years, female
146.8
GTEX-1IDJH-0011-R8b-SM-ARZLL
70-79 years, male
145.8
GTEX-1GZ4I-0011-R8b-SM-9WG76
50-59 years, male
145.3
GTEX-1HFI6-0011-R8a-SM-ARZLP
40-49 years, male
144.8
GTEX-1O9I2-0011-R8a-SM-F2TAX
50-59 years, male
144.7
GTEX-QVJO-0011-R8A-SM-447C7
60-69 years, female
144.2
GTEX-1HCU6-0011-R8a-SM-CJI3R
60-69 years, female
143.5
GTEX-1HBPI-0011-R8a-SM-A9G1S
50-59 years, male
143.4
GTEX-1A3MX-0011-R8a-SM-7P8PI
60-69 years, male
142.7
GTEX-1JN6P-0011-R8a-SM-F6499
60-69 years, male
142.0
GTEX-1QMI2-0011-R8a-SM-F3429
60-69 years, male
141.8
GTEX-147F4-0011-R8b-SM-5S2UN
50-59 years, male
141.4
GTEX-1H1CY-0011-R8b-SM-CJI31
60-69 years, female
141.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA
70-79 years, male
141.0
GTEX-1R9PO-0011-R8a-SM-F2TA3
60-69 years, female
141.0
GTEX-14ASI-0011-R8b-SM-5S2UB
60-69 years, male
140.5
GTEX-16Z82-0011-R8a-SM-7DUEX
60-69 years, male
140.5
GTEX-17EVQ-0011-R8a-SM-7189T
70-79 years, male
140.5
GTEX-13X6J-0011-R8b-SM-5PNUA
50-59 years, male
138.8
GTEX-11GSO-0011-R8b-SM-GJ3PM
60-69 years, male
138.1
GTEX-1GN1V-0011-R8a-SM-CKZNV
60-69 years, male
137.6
GTEX-1OJC4-0011-R8a-SM-F3K5B
50-59 years, female
137.3
GTEX-11EI6-0011-R8a-SM-DO93M
60-69 years, male
137.0
GTEX-1F75W-0011-R8a-SM-9QEI4
60-69 years, male
136.8
GTEX-11GS4-0011-R8b-SM-GI4XA
60-69 years, male
136.3
GTEX-13NZA-0011-R8b-SM-5KM2Q
60-69 years, male
136.0
GTEX-15EO6-0011-R8a-SM-H6Q6R
50-59 years, male
136.0
GTEX-13O3Q-0011-R8b-SM-5KM2J
50-59 years, male
135.9
GTEX-11NV4-0011-R8b-SM-GHWO4
60-69 years, male
135.7
GTEX-13FXS-0011-R8a-SM-5J1MN
50-59 years, male
135.5
GTEX-XMD1-0011-R8A-SM-4AT48
60-69 years, male
135.3
GTEX-132Q8-0011-R8b-SM-5DUWX
60-69 years, male
134.8
GTEX-12696-0011-R8a-SM-GINAP
60-69 years, male
134.7
GTEX-144GL-0011-R8a-SM-5Q5B1
50-59 years, male
134.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J
60-69 years, male
134.5
GTEX-1N2EF-0011-R8a-SM-F6481
60-69 years, male
134.4
GTEX-13SLW-0011-R8b-SM-5SI64
70-79 years, male
134.3
GTEX-11ZU8-0011-R8b-SM-GHWOM
60-69 years, male
134.1
GTEX-13112-0011-R8b-SM-664OV
50-59 years, male
133.8
GTEX-17HG3-0011-R8a-SM-79OK7
30-39 years, female
133.5
GTEX-1R9K4-0011-R8b-SM-F649L
60-69 years, male
133.1
GTEX-15SHU-0011-R8a-SM-H6Q7V
40-49 years, female
132.8
GTEX-13PDP-0011-R8b-SM-5O9CS
60-69 years, male
132.5
GTEX-1B996-0011-R8b-SM-79OOS
60-69 years, male
132.2
GTEX-1I1GS-0011-R8b-SM-CKZPE
60-69 years, male
132.2
GTEX-QVUS-0011-R8A-SM-3GAD7
60-69 years, female
131.3
GTEX-11ONC-0011-R8b-SM-5NQ87
60-69 years, male
131.1
GTEX-X4XX-0011-R8B-SM-46MWM
60-69 years, male
131.1
GTEX-1F52S-0011-R8a-SM-9OSXA
60-69 years, female
130.9
GTEX-1JMPZ-0011-R8b-SM-F341A
30-39 years, male
129.8
GTEX-13VXU-0011-R8b-SM-GJ3RR
50-59 years, male
129.2
GTEX-1399T-0011-R8b-SM-5IJD8
60-69 years, male
129.0
GTEX-1JJEA-0011-R8a-SM-F3419
60-69 years, male
129.0
GTEX-11ZTS-0011-R8a-SM-57WDI
60-69 years, female
128.8
GTEX-12126-0011-R8a-SM-GI4WV
20-29 years, male
128.4
GTEX-1RQEC-0011-R8b-SM-F648X
60-69 years, male
128.2
GTEX-13G51-0011-R8b-SM-5LZZ4
60-69 years, male
128.1
GTEX-1HSKV-0011-R8a-SM-CL54X
60-69 years, male
127.7
GTEX-111FC-0011-R8b-SM-GI4VS
60-69 years, male
127.3
GTEX-1KD4Q-0011-R8a-SM-F341N
40-49 years, male
127.1
GTEX-1HGF4-0011-R8b-SM-CKZP9
60-69 years, male
126.9
GTEX-1H23P-0011-R8b-SM-A9G1G
60-69 years, male
126.7
GTEX-11GSP-0011-R8b-SM-5NQ79
60-69 years, female
126.4
GTEX-1JMOU-0011-R8b-SM-F2TA9
60-69 years, female
125.7
GTEX-ZVT3-0011-R8b-SM-57WDJ
60-69 years, female
125.2
GTEX-X4XY-0011-R8A-SM-46MVC
60-69 years, male
124.9
GTEX-12ZZX-0011-R8a-SM-5DUW8
40-49 years, female
124.7
GTEX-11DZ1-0011-R8b-SM-DNZZI
50-59 years, male
124.6
GTEX-ZUA1-0011-R8b-SM-51MST
40-49 years, male
124.5
GTEX-1E2YA-0011-R8a-SM-CKZNG
50-59 years, male
123.4
GTEX-1PPGY-0011-R8a-SM-F649R
60-69 years, male
122.5
GTEX-ZVZQ-0011-R8a-SM-51MR5
60-69 years, female
122.3
GTEX-1192X-0011-R8b-SM-DO11U
50-59 years, male
122.2
GTEX-13OVJ-0011-R8b-SM-5L3FS
50-59 years, female
122.2
GTEX-1N2DW-0011-R8a-SM-EY5YD
50-59 years, male
122.2
GTEX-1IKK5-0011-R8b-SM-CJI45
60-69 years, male
121.8
GTEX-15ER7-0011-R8a-SM-7KUL2
20-29 years, female
121.7
GTEX-13X6K-0011-R8b-SM-5PNZ4
60-69 years, female
121.1
GTEX-1MCQQ-0011-R8b-SM-F341H
60-69 years, male
120.9
GTEX-1CB4H-0011-R8b-SM-CJI26
60-69 years, female
120.8
GTEX-18465-0011-R8b-SM-7LG6O
50-59 years, male
119.9
GTEX-117YW-0011-R8a-SM-GINAB
50-59 years, male
119.8
GTEX-1MJK2-0011-R8a-SM-F341I
50-59 years, male
119.8
GTEX-11O72-0011-R8a-SM-GJ3R9
40-49 years, male
119.7
GTEX-T5JC-0011-R8A-SM-32PLM
20-29 years, male
119.6
GTEX-1GF9V-0011-R8b-SM-CE6RB
60-69 years, male
119.0
GTEX-13O3O-0011-R8b-SM-5LUAL
60-69 years, female
118.4
GTEX-1C64N-0011-R8b-SM-7MGXE
50-59 years, male
117.4
GTEX-1C6VR-0011-R8b-SM-7MXUF
60-69 years, male
116.8
GTEX-14LZ3-0011-R8b-SM-COH3M
60-69 years, female
116.7
GTEX-1JN1M-0011-R8b-SM-F6485
60-69 years, female
116.6
GTEX-1CAMQ-0011-R8a-SM-ARU85
40-49 years, male
114.9
GTEX-1JMQK-0011-R8a-SM-G8LMS
60-69 years, male
114.9
GTEX-1LVA9-0011-R8a-SM-F3K5G
50-59 years, male
114.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS
50-59 years, male
113.8
GTEX-14DAQ-0011-R8a-SM-G9ERP
60-69 years, female
113.3
GTEX-1C6WA-0011-R8b-SM-7P8S7
60-69 years, male
112.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ
60-69 years, male
112.7
GTEX-1HCVE-0011-R8a-SM-ARU7A
50-59 years, male
112.5
GTEX-14PQA-0011-R8b-SM-6AJAB
50-59 years, female
112.4
GTEX-13OW8-0011-R8a-SM-5L3G5
60-69 years, male
112.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ
50-59 years, male
112.3
GTEX-12WSM-0011-R8a-SM-5DUWJ
60-69 years, male
112.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT
50-59 years, male
112.1
GTEX-1R46S-0011-R8a-SM-F3K4Q
60-69 years, female
111.7
GTEX-YJ89-0011-R8b-SM-4SOK8
60-69 years, male
111.7
GTEX-11WQC-0011-R8b-SM-57WCH
60-69 years, male
111.2
GTEX-16GPK-0011-R8a-SM-79OMQ
60-69 years, male
110.0
GTEX-1BAJH-0011-R8a-SM-7MXUB
70-79 years, male
109.3
GTEX-14E7W-0011-R8b-SM-GQ1D6
70-79 years, male
108.6
GTEX-1IKOH-0011-R8a-SM-A9SKG
60-69 years, female
107.8
GTEX-1MA7X-0011-R8a-SM-G9EQD
60-69 years, male
107.4
GTEX-14BMV-0011-R8a-SM-G9ERM
50-59 years, male
107.1
GTEX-13CF2-0011-R8b-SM-5IJCX
60-69 years, male
106.1
GTEX-1I1CD-0011-R8b-SM-CJI3X
60-69 years, female
106.1
GTEX-1KWVE-0011-R8a-SM-F3K4V
30-39 years, male
104.8
GTEX-ZDXO-0011-R8a-SM-4WWD7
60-69 years, male
104.3
GTEX-1KANB-0011-R8a-SM-F3K5N
50-59 years, male
104.0
GTEX-WVLH-0011-R8A-SM-3MJFC
50-59 years, male
102.7
GTEX-1I1HK-0011-R8b-SM-E8VN9
60-69 years, male
101.9
GTEX-ZF28-0011-R8a-SM-4WWFW
60-69 years, male
101.0
GTEX-1CAV2-0011-R8a-SM-GRR24
40-49 years, female
100.9
GTEX-13QJC-0011-R8b-SM-5S2U6
60-69 years, female
100.6
GTEX-1GTWX-0011-R8a-SM-CE6RM
60-69 years, male
100.0
GTEX-16NPV-0011-R8a-SM-7EPH8
50-59 years, female
97.3
GTEX-1POEN-0011-R8b-SM-F647O
30-39 years, female
97.1
GTEX-1N5O9-0011-R8a-SM-F649C
60-69 years, male
95.5
GTEX-131XW-0011-R8a-SM-5DUWY
50-59 years, female
94.9
GTEX-1CB4J-0011-R8a-SM-9QEHU
60-69 years, male
94.0
GTEX-14PJO-0011-R8a-SM-6AJAL
60-69 years, male
93.9
GTEX-1477Z-0011-R8b-SM-5S2RG
60-69 years, male
93.4
GTEX-139TS-0011-R8a-SM-5J1NP
60-69 years, male
93.3
GTEX-ZXG5-0011-R8a-SM-57WD1
60-69 years, male
92.0
GTEX-1GZHY-0011-R8b-SM-9OSWK
50-59 years, female
91.4
GTEX-1445S-0011-R8a-SM-5PNWX
60-69 years, male
91.1
GTEX-1LKK1-0011-R8a-SM-F341O
50-59 years, female
89.8
GTEX-14BIL-0011-R8b-SM-69LQK
50-59 years, male
89.7
GTEX-1RAZS-0011-R8a-SM-F2TBI
50-59 years, male
88.6
GTEX-14753-0011-R8b-SM-5S2U1
60-69 years, male
87.0
GTEX-13JVG-0011-R8a-SM-5KM3E
60-69 years, male
83.5
GTEX-11WQK-0011-R8a-SM-5BC7C
50-59 years, male
82.9
GTEX-1GN2E-0011-R8a-SM-CE6RK
60-69 years, male
82.0
GTEX-1F88E-0011-R8a-SM-CJI2H
60-69 years, female
76.1
GTEX-OXRN-0011-R8A-SM-E9TI1
50-59 years, male
75.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG
60-69 years, female
65.9
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HYPOTHALAMUS - Macaque RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
552.9
Macaque sample
Sample description
nTPM
Preoptic area nTPM: 552.9
Samples: 1
Max nTPM: 552.9
Min nTPM: 552.9
Sample A
552.9
HYPOTHALAMUS - Pig RNA-seqi
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
567.8
Pig sample
Sample description
nTPM
Hypothalamus nTPM: 567.8
Samples: 4
Max nTPM: 721.3
Min nTPM: 379.2
Sample A
Female
721.3
Sample B
Female
628.7
Sample C
Male
541.9
Sample D
Male
379.2
HYPOTHALAMUS - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
449.9
Mouse sample
Sample description
nTPM
Hypothalamus nTPM: 449.9
Samples: 4
Max nTPM: 511.5
Min nTPM: 404.8
Sample A
430.8
Sample B
511.5
Sample C
452.4
Sample D
404.8
HYPOTHALAMUS - Rat RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
317.9
Rat sample
Sample description
nTPM
Hypothalamus nTPM: 317.9
Samples: 4
Max nTPM: 327.0
Min nTPM: 306.6
Sample A
315.9
Sample A
306.6
Sample A
321.9
Sample A
327.0
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The Human Protein Atlas project is funded
