HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:695.9 nTPM
HPA Brain:220.4 nTPM
GTEx:695.9 nTPM
FANTOM5:123.0 Scaled Tags Per Million
Pig:182.5 nTPM
Mouse:358.6 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005985
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 220.4
Sample id Sample description nTPM
Hippocampus
nTPM: 220.4
1898 Male, age 80, left hemisphere 278.6
1911 Female, age 85, right hemisphere 226.0
2529 Female, age 94, left hemisphere 224.4
1855 Male, age 76, left hemisphere 215.5
2621 Female, age 67, right hemisphere 211.0
2148 Female, age 91, left hemisphere 166.8
Dentate gyrus
nTPM: 211.9
2010 Male, age 76, both hemispheres 266.3
2530 Female, age 94, left hemisphere 265.1
2528 Male, age 74, both hemispheres 195.0
1927 Female, age 91, both hemispheres 194.1
2246 Female, age 85, both hemispheres 180.9
2531 Female, age 67, both hemispheres 170.3
Entorhinal gyrus
nTPM: 191.9
2686 Male, age 75, right hemisphere 224.5
1787 Male, age 76, left hemisphere 213.1
2117 Female, age 91, right hemisphere 210.6
1938 Female, age 85, left hemisphere 178.7
2764 Male, age 80, right hemisphere 174.6
2613 Female, age 94, left hemisphere 150.1
Hippocampus, CA1
nTPM: 207.7
2045 Male, age 76, both hemispheres 230.6
1873 Female, age 85, both hemispheres 228.4
2082 Female, age 91, right hemisphere 199.6
2749 Male, age 80, left hemisphere 198.3
2527 Male, age 74, both hemispheres 181.5
Hippocampus, CA2
nTPM: 209.9
1963 Male, age 80, left hemisphere 234.3
1892 Male, age 76, both hemispheres 221.1
2249 Male, age 74, both hemispheres 212.1
2437 Female, age 94, left hemisphere 200.9
1940 Female, age 85, left hemisphere 195.9
2113 Female, age 91, right hemisphere 195.4
Hippocampus, CA3
nTPM: 184.4
1867 Male, age 76, both hemispheres 244.6
1891 Female, age 85, both hemispheres 237.6
2436 Male, age 74, both hemispheres 191.6
2137 Male, age 80, left hemisphere 163.5
2861 Female, age 67, both hemispheres 154.2
2620 Female, age 94, left hemisphere 115.0
Parahippocampal cortex
nTPM: 185.8
2018 Male, age 76, both hemispheres 285.4
2250 Female, age 67, right hemisphere 202.7
1850 Male, age 80, both hemispheres 201.0
1990 Female, age 91, right hemisphere 195.9
1933 Female, age 85, both hemispheres 182.5
2692 Male, age 74, both hemispheres 178.1
2245 Female, age 91, both hemispheres 166.5
2532 Female, age 72, left hemisphere 158.5
2693 Female, age 94, both hemispheres 144.4
2622 Female, age 67, right hemisphere 142.9
Perirhinal gyrus
nTPM: 191.4
1847 Female, age 91, left hemisphere 224.3
1841 Female, age 85, right hemisphere 211.5
1794 Male, age 80, right hemisphere 199.8
2848 Male, age 76, right hemisphere 177.4
2521 Female, age 94, right hemisphere 144.0
Subiculum
nTPM: 220.1
2042 Male, age 76, both hemispheres 282.1
2438 Female, age 94, left hemisphere 228.5
1977 Female, age 85, both hemispheres 223.4
1901 Male, age 80, both hemispheres 217.2
2729 Female, age 91, right hemisphere 203.8
2619 Male, age 74, both hemispheres 165.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 695.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 695.9
Samples: 255

Max nTPM: 2023.0
Min nTPM: 285.5
Std nTPM: 253.3
Median nTPM: 632.1
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2023.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1868.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1753.5
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1525.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1492.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1338.7
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 1328.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1309.5
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1272.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1236.9
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 1216.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 123.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 123.0
FF:10153-102I9 76 years, female 145.3
FF:10169-103B7 60 years, female 100.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 182.5
Pig sample Sample description nTPM
Subiculum
nTPM: 141.6
Samples: 4

Max nTPM: 159.1
Min nTPM: 131.0
Sample A Female 159.1
Sample B Female 131.0
Sample C Male 139.1
Sample D Male 137.2
Dorsal hippocampus
nTPM: 182.5
Samples: 4

Max nTPM: 235.2
Min nTPM: 147.4
Sample A Female 193.7
Sample B Female 153.6
Sample C Male 235.2
Sample D Male 147.4
Entorhinal cortex
nTPM: 137.3
Samples: 4

Max nTPM: 170.7
Min nTPM: 101.5
Sample A Female 101.5
Sample B Female 162.0
Sample C Male 170.7
Sample D Male 115.1
Ventral hippocampus
nTPM: 157.6
Samples: 4

Max nTPM: 217.9
Min nTPM: 109.3
Sample A Female 109.3
Sample B Female 120.8
Sample C Male 217.9
Sample D Male 182.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 358.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 334.6
Samples: 4

Max nTPM: 358.6
Min nTPM: 307.7
Sample A Male 358.6
Sample B Male 346.2
Sample C Female 307.7
Sample D Female 325.9
Hippocampal formation
nTPM: 358.6
Samples: 4

Max nTPM: 380.9
Min nTPM: 332.1
Sample A Male 380.9
Sample B Male 360.0
Sample C Female 332.1
Sample D Female 361.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68301867 Antisense, RP_041130_02_A01, Mouse strain C57BL/6J (56 days, male) 0.4

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