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  • SUMMARY

  • TISSUE

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  • RPS13
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:679.7 nTPM
HPA Brain:364.5 nTPM
GTEx:679.7 nTPM
Pig:177.2 nTPM
Mouse:321.4 nTPM
Allen mouse:0.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

364.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 186.9
2226 Male, age 75, left hemisphere 191.9
1961 Female, age 42, unknown 181.8
Dorsomedial nucleus
nTPM: 241.4
2041 Female, age 72, unknown 268.0
2017 Female, age 42, unknown 237.6
1989 Male, age 62, unknown 218.4
Lateral hypothalamic area
nTPM: 281.2
2228 Male, age 66, unknown 327.9
1791 Male, age 80, right hemisphere 297.6
2412 Male, age 62, unknown 258.7
2271 Male, age 75, both hemispheres 240.8
Mammillary body
nTPM: 296.9
1923 Female, age 72, unknown 331.1
1948 Female, age 72, unknown 314.3
1945 Male, age 80, right hemisphere 313.0
1834 Female, age 42, unknown 276.9
2413 Male, age 66, unknown 249.3
Paraventricular nucleus
nTPM: 261.9
2700 Male, age 62, unknown 261.9
Preoptic area
nTPM: 245.4
1861 Female, age 42, unknown 271.0
1907 Male, age 80, right hemisphere 233.8
2414 Female, age 72, unknown 231.3
Supraoptic nucleus
nTPM: 364.5
1894 Female, age 72, unknown 448.1
2043 Male, age 62, unknown 404.7
2835 Female, age 72, unknown 240.7
Ventromedial nucleus
nTPM: 206.7
1982 Female, age 72, unknown 224.0
1822 Female, age 42, unknown 189.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

679.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 679.7
Samples: 257

Max nTPM: 2800.3
Min nTPM: 290.8
Std nTPM: 335.5
Median nTPM: 596.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 2800.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 2587.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 2174.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1933.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1812.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1743.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1639.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1602.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1370.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1296.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1291.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1289.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1236.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1224.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1220.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1213.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1203.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1189.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1184.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1170.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1113.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1105.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1048.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1047.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1031.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1028.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 993.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 993.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 992.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 987.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 986.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 966.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 960.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 957.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 950.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 948.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 948.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 944.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 937.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 932.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 914.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 905.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 897.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 885.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 885.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 867.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 866.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 858.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 831.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 828.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 824.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 823.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 810.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 806.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 798.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 782.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 776.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 776.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 768.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 762.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 761.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 759.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 757.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 753.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 748.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 743.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 741.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 739.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 735.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 733.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 731.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 730.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 725.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 720.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 720.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 719.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 714.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 713.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 711.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 706.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 705.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 702.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 695.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 692.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 691.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 690.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 685.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 682.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 680.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 679.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 678.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 674.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 670.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 667.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 666.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 660.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 659.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 658.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 656.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 655.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 654.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 653.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 653.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 652.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 650.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 649.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 647.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 647.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 646.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 645.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 642.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 641.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 640.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 639.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 638.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 629.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 627.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 626.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 624.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 623.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 622.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 614.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 610.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 607.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 607.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 603.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 601.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 599.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 596.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 596.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 594.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 590.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 587.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 586.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 585.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 585.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 584.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 583.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 579.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 578.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 577.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 574.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 573.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 572.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 568.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 566.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 566.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 566.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 561.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 560.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 559.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 555.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 554.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 552.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 541.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 539.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 538.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 538.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 537.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 532.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 531.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 529.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 524.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 522.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 522.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 522.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 519.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 518.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 518.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 515.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 515.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 513.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 513.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 513.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 512.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 512.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 511.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 510.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 508.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 508.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 503.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 503.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 502.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 502.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 499.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 498.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 496.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 496.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 496.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 495.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 494.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 491.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 491.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 488.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 486.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 486.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 485.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 485.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 482.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 480.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 478.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 471.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 469.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 469.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 466.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 463.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 457.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 457.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 455.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 453.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 449.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 446.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 444.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 441.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 431.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 429.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 427.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 425.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 419.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 415.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 414.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 414.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 413.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 410.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 405.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 403.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 396.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 395.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 395.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 395.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 394.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 389.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 388.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 387.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 386.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 386.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 386.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 384.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 381.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 381.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 370.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 369.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 366.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 365.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 358.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 348.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 342.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 339.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 339.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 337.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 330.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 328.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 327.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 318.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 317.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 306.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 290.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

177.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 177.2
Samples: 4

Max nTPM: 203.7
Min nTPM: 138.1
Sample A Female 200.1
Sample B Female 166.7
Sample C Male 203.7
Sample D Male 138.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

321.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 321.4
Samples: 4

Max nTPM: 396.4
Min nTPM: 274.9
Sample A Male 333.5
Sample B Male 396.4
Sample C Female 280.7
Sample D Female 274.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.7
68301867 Antisense, RP_041130_02_A01, Mouse strain C57BL/6J (56 days, male) 0.7

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