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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • ENO2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

116.837
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:278.4 nTPM
HPA Brain:553.4 nTPM
GTEx:278.4 nTPM
Pig:401.6 nTPM
Mouse:707.6 nTPM
Allen mouse:25.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB079023
Hypothalamus mean intensity 116.837
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 93.411
Mammillary nucleus 49.085
Periventricular hypothalamic nucleus 116.837
Supraoptic nucleus 53.589
Tuberal nucleus 97.572
Ventral tuberomammillary nucleus -
Lateral preoptic area 74.234
Medial preoptic area 56.236
Suprachiasmatic nucleus 79.574
Paraventricular hypothalamic nucleus 46.539
Anterior hypothalamic area, central 56.908
Ventral medial hypothalamic nucleus 94.197
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 107.022
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 75.822
Dorsal medial hypothalamic nucleus 83.919
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

553.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 445.6
2226 Male, age 75, left hemisphere 591.8
1961 Female, age 42, unknown 299.4
Dorsomedial nucleus
nTPM: 332.0
1989 Male, age 62, unknown 440.2
2041 Female, age 72, unknown 293.7
2017 Female, age 42, unknown 262.1
Lateral hypothalamic area
nTPM: 553.4
2228 Male, age 66, unknown 808.8
2271 Male, age 75, both hemispheres 551.2
1791 Male, age 80, right hemisphere 535.1
2412 Male, age 62, unknown 318.7
Mammillary body
nTPM: 376.6
1923 Female, age 72, unknown 649.4
2413 Male, age 66, unknown 370.4
1948 Female, age 72, unknown 335.6
1834 Female, age 42, unknown 293.1
1945 Male, age 80, right hemisphere 234.5
Paraventricular nucleus
nTPM: 277.1
2700 Male, age 62, unknown 277.1
Preoptic area
nTPM: 349.3
1907 Male, age 80, right hemisphere 475.8
1861 Female, age 42, unknown 296.5
2414 Female, age 72, unknown 275.7
Supraoptic nucleus
nTPM: 267.6
2835 Female, age 72, unknown 318.9
1894 Female, age 72, unknown 274.1
2043 Male, age 62, unknown 209.9
Ventromedial nucleus
nTPM: 361.9
1982 Female, age 72, unknown 415.7
1822 Female, age 42, unknown 308.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

278.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 278.4
Samples: 257

Max nTPM: 681.2
Min nTPM: 97.2
Std nTPM: 110.3
Median nTPM: 268.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 681.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 601.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 592.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 591.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 537.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 531.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 525.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 513.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 502.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 501.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 500.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 494.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 482.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 481.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 475.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 468.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 453.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 453.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 449.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 446.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 443.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 434.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 425.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 425.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 418.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 415.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 413.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 410.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 405.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 402.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 401.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 398.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 397.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 397.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 396.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 396.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 390.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 388.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 388.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 386.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 386.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 383.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 382.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 377.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 377.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 376.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 374.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 374.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 373.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 373.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 372.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 370.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 370.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 364.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 363.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 363.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 361.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 359.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 358.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 357.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 357.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 356.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 356.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 356.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 354.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 354.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 352.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 350.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 344.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 344.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 342.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 341.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 340.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 339.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 336.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 336.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 334.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 332.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 331.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 331.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 326.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 325.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 325.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 324.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 322.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 322.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 321.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 320.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 320.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 319.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 318.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 312.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 311.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 311.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 309.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 305.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 303.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 303.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 302.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 302.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 300.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 299.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 299.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 298.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 294.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 293.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 290.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 287.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 284.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 284.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 284.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 283.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 283.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 283.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 280.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 280.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 277.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 277.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 276.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 276.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 272.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 272.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 272.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 270.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 270.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 270.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 269.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 268.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 268.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 268.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 266.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 265.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 265.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 264.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 261.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 260.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 260.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 258.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 258.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 257.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 257.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 256.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 255.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 255.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 254.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 254.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 253.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 253.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 252.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 252.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 250.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 249.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 248.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 247.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 246.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 243.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 243.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 241.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 240.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 240.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 238.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 236.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 235.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 230.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 230.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 225.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 225.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 223.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 222.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 222.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 221.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 220.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 219.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 219.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 216.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 211.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 209.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 208.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 207.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 206.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 206.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 206.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 205.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 200.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 200.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 200.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 197.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 195.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 195.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 193.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 192.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 192.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 191.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 190.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 188.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 187.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 187.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 187.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 184.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 184.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 184.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 183.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 183.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 181.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 180.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 180.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 180.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 178.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 178.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 173.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 171.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 171.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 168.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 166.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 165.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 164.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 163.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 161.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 160.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 158.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 158.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 157.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 155.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 154.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 147.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 146.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 145.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 144.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 142.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 140.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 140.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 138.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 138.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 137.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 134.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 130.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 127.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 126.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 126.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 126.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 123.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 120.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 119.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 118.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 115.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 114.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 113.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 113.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 111.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 111.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 106.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 104.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 101.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 99.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 97.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 97.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 97.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

401.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 401.6
Samples: 4

Max nTPM: 523.7
Min nTPM: 357.5
Sample A Female 523.7
Sample B Female 358.5
Sample C Male 366.7
Sample D Male 357.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

707.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 707.6
Samples: 4

Max nTPM: 784.1
Min nTPM: 678.9
Sample A Male 687.3
Sample B Male 784.1
Sample C Female 678.9
Sample D Female 680.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

25.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 25.9
112197625 Antisense, RP_110421_01_F07, Mouse strain C57BL/6J (56 days, male) 28.7
79360272 Antisense, RP_071018_01_G01, Mouse strain C57BL/6J (56 days, male) 23.0

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