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  • SUMMARY

  • TISSUE

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  • RPS12
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1383.3 nTPM
HPA Brain:445.1 nTPM
GTEx:1383.3 nTPM
Pig:327.2 nTPM
Mouse:710.8 nTPM
Allen mouse:5.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

445.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 224.9
1961 Female, age 42, unknown 245.5
2226 Male, age 75, left hemisphere 204.4
Dorsomedial nucleus
nTPM: 293.9
1989 Male, age 62, unknown 315.0
2041 Female, age 72, unknown 284.7
2017 Female, age 42, unknown 282.0
Lateral hypothalamic area
nTPM: 357.4
2228 Male, age 66, unknown 393.1
2412 Male, age 62, unknown 367.2
1791 Male, age 80, right hemisphere 355.8
2271 Male, age 75, both hemispheres 313.4
Mammillary body
nTPM: 356.5
1945 Male, age 80, right hemisphere 409.4
1948 Female, age 72, unknown 399.9
1834 Female, age 42, unknown 339.3
1923 Female, age 72, unknown 319.6
2413 Male, age 66, unknown 314.1
Paraventricular nucleus
nTPM: 389.8
2700 Male, age 62, unknown 389.8
Preoptic area
nTPM: 309.3
1861 Female, age 42, unknown 357.3
2414 Female, age 72, unknown 332.5
1907 Male, age 80, right hemisphere 238.2
Supraoptic nucleus
nTPM: 445.1
1894 Female, age 72, unknown 488.2
2043 Male, age 62, unknown 480.9
2835 Female, age 72, unknown 366.3
Ventromedial nucleus
nTPM: 248.3
1982 Female, age 72, unknown 267.9
1822 Female, age 42, unknown 228.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1383.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1383.3
Samples: 257

Max nTPM: 7321.4
Min nTPM: 478.1
Std nTPM: 827.4
Median nTPM: 1165.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 7321.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 4740.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 4692.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 4572.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 4458.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 4406.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 4380.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 3448.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 3286.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 3119.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 2936.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 2926.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 2909.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 2839.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 2716.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 2657.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 2615.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 2607.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 2566.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 2556.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 2528.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 2392.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 2278.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 2250.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 2248.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 2163.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 2151.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 2145.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 2132.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 2132.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 2120.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 2119.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 2087.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 2080.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 2006.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 2000.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1956.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1956.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 1954.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1857.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1854.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1853.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1842.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1831.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1819.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1817.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1803.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1788.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 1753.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1752.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1719.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 1706.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 1703.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1692.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1689.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1672.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1669.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1653.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1646.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 1624.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 1604.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 1603.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 1601.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 1574.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 1569.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 1566.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 1541.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1536.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1536.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1526.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1519.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1511.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1508.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 1496.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 1493.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1491.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 1490.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 1473.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 1460.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1455.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 1431.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1411.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 1406.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1404.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 1398.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1390.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 1381.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 1374.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 1369.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 1366.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 1364.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 1361.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 1358.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1346.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 1335.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 1335.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 1332.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 1324.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1322.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 1313.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1287.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 1277.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 1268.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 1265.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 1261.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 1260.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 1257.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 1257.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 1255.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 1246.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 1241.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 1233.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 1230.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 1223.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 1221.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 1214.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 1214.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 1213.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 1208.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 1202.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 1199.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 1195.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1193.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 1186.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 1182.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 1181.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1176.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 1170.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1165.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 1153.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 1152.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 1151.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 1150.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1148.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 1144.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 1143.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 1137.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 1127.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1126.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 1125.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 1120.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 1120.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 1116.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 1110.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 1109.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 1098.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 1097.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 1088.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 1066.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 1051.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 1050.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 1038.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1037.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 1030.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 1029.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 1029.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 1028.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 1024.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 1022.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 1022.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 1015.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 1012.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 1011.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 998.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 989.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 980.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 977.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 976.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 976.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 975.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 974.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 972.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 971.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 970.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 970.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 961.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 961.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 958.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 950.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 945.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 927.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 926.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 923.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 920.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 916.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 915.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 915.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 909.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 907.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 901.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 899.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 898.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 898.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 898.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 894.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 892.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 882.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 881.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 876.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 872.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 872.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 870.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 870.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 869.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 866.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 861.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 859.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 858.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 855.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 854.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 849.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 836.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 835.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 829.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 813.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 809.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 806.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 798.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 790.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 789.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 780.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 780.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 771.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 768.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 762.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 761.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 755.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 751.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 748.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 744.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 740.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 738.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 715.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 711.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 693.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 691.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 689.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 685.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 682.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 673.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 663.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 659.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 653.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 648.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 645.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 631.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 629.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 608.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 589.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 576.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 570.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 550.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 547.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 545.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 524.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 483.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 478.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

327.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 327.2
Samples: 4

Max nTPM: 419.5
Min nTPM: 195.8
Sample A Female 419.5
Sample B Female 351.1
Sample C Male 342.4
Sample D Male 195.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

710.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 710.8
Samples: 4

Max nTPM: 910.1
Min nTPM: 594.5
Sample A Male 724.9
Sample B Male 910.1
Sample C Female 594.5
Sample D Female 613.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.4
631721 Antisense, RP_040907_01_B12, Mouse strain C57BL/6J (56 days, male) 8.0
70928395 Antisense, RP_050808_02_A04, Mouse strain C57BL/6J (56 days, male) 2.8

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