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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:19.1 nTPM
HPA Brain:117.5 nTPM
GTEx:19.1 nTPM
FANTOM5:80.9 Scaled Tags Per Million
Pig:64.3 nTPM
Mouse:20.2 nTPM
Allen mouse:1.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA052625Antibody CAB004300Antibody CAB004674
Glial cells MediumNot detectedHigh
Neuronal cells Not detectedNot detectedLow







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 76.4
1781 Male, age 74, unknown 87.2
2481 Female, age 94, left hemisphere 85.6
2288 Male, age 75, left hemisphere 83.1
2290 Female, age 72, unknown 79.1
2846 Female, age 79, unknown 71.0
1854 Male, age 80, left hemisphere 69.8
2289 Male, age 61, right hemisphere 69.6
1857 Female, age 85, left hemisphere 65.8
Globus pallidus, externus
nTPM: 117.5
2567 Female, age 72, unknown 135.3
1996 Male, age 80, right hemisphere 125.6
2646 Male, age 61, right hemisphere 124.2
2772 Female, age 79, unknown 115.7
2395 Male, age 75, both hemispheres 86.8
Globus pallidus, internus
nTPM: 116.7
2111 Female, age 85, right hemisphere 130.6
2566 Female, age 72, unknown 126.7
1818 Male, age 74, unknown 116.7
2483 Female, age 94, right hemisphere 111.2
2037 Male, age 80, right hemisphere 111.1
2287 Male, age 75, right hemisphere 111.0
2778 Female, age 91, both hemispheres 109.8
Nucleus accumbens
nTPM: 68.8
2732 Male, age 80, right hemisphere 83.5
2698 Female, age 72, unknown 80.4
2286 Male, age 75, left hemisphere 77.3
1783 Male, age 74, unknown 69.5
2391 Female, age 94, left hemisphere 69.2
1806 Female, age 85, left hemisphere 69.1
1856 Female, age 91, right hemisphere 51.3
2824 Male, age 61, right hemisphere 49.7
Nucleus basalis of Meynert
nTPM: 85.3
2569 Male, age 61, both hemispheres 122.1
2821 Male, age 75, both hemispheres 84.7
2484 Female, age 94, left hemisphere 71.1
2393 Male, age 80, right hemisphere 63.4
Nucleus of the diagonal band
nTPM: 60.8
2029 Male, age 61, right hemisphere 65.3
1812 Female, age 91, both hemispheres 62.5
1979 Male, age 74, unknown 62.1
2195 Female, age 85, both hemispheres 58.2
2775 Male, age 80, right hemisphere 55.9
Putamen
nTPM: 80.1
2647 Male, age 75, left hemisphere 107.2
2489 Female, age 72, unknown 99.0
1829 Male, age 74, unknown 84.5
2482 Female, age 94, left hemisphere 82.8
2466 Female, age 79, unknown 65.1
1937 Female, age 91, right hemisphere 61.3
1838 Male, age 80, right hemisphere 60.7
Septal nuclei
nTPM: 65.3
2199 Male, age 80, right hemisphere 79.1
2394 Male, age 61, left hemisphere 72.3
2059 Female, age 85, both hemispheres 69.9
2629 Female, age 94, right hemisphere 67.4
2009 Female, age 91, both hemispheres 59.4
1960 Male, age 74, unknown 54.9
2031 Female, age 72, unknown 54.0
Stria terminalis, bed nucleus
nTPM: 64.5
2201 Male, age 74, unknown 69.8
1974 Female, age 91, both hemispheres 64.2
2486 Female, age 94, both hemispheres 59.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 17.6
Samples: 246

Max nTPM: 35.4
Min nTPM: 5.0
Std nTPM: 3.9
Median nTPM: 17.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 35.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 27.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 26.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 26.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 26.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 26.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 26.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 25.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 25.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 25.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 24.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 24.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 24.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 24.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 24.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 23.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 23.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 23.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 23.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 23.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 23.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 23.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 23.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 23.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 23.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 22.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 22.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 22.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 22.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 22.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 22.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 22.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 21.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 21.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 21.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 21.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 21.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 21.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 21.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 21.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 21.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 21.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 21.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 21.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 21.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 21.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 21.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 20.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 20.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 20.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 20.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 20.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 20.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 20.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 20.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 20.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 20.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 20.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 20.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 20.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 20.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 20.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 20.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 20.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 19.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 19.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 19.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 19.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 19.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 19.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 19.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 19.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 19.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 19.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 19.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 19.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 19.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 19.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 19.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 19.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 19.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 19.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 19.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 19.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 19.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 18.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 18.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 18.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 18.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 18.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 18.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 18.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 18.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 18.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 18.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 18.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 18.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 18.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 18.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 18.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 18.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 18.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 18.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 18.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 18.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 18.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 18.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 18.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 18.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 18.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 18.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 18.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 17.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 17.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 17.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 17.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 17.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 17.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 17.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 17.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 17.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 17.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 17.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 17.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 17.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 17.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 17.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 17.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 17.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 17.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 17.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 17.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 17.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 17.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 17.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 16.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 16.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 16.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 16.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 16.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 16.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 16.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 16.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 16.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 16.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 16.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 16.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 16.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 16.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 16.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 16.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 16.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 16.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 16.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 15.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 15.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 15.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 15.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 15.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 15.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 15.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 15.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 15.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 15.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 15.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 15.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 15.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 15.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 15.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 15.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 15.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 15.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 15.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 15.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 15.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 15.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 15.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 15.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 15.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 15.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 15.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 14.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 14.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 14.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 14.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 14.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 14.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 14.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 14.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 14.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 14.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 14.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 14.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 14.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 14.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 14.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 14.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 14.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 14.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 14.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 14.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 14.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 14.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 14.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 14.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 14.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 14.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 13.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 13.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 13.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 13.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 13.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 13.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 13.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 13.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 13.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 13.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 13.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 13.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 12.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 12.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 12.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 12.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 12.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 12.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 12.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 11.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 11.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 11.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 11.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 11.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 11.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 11.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 11.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 11.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 11.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 11.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 11.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 10.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 10.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 10.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 10.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 10.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 9.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 8.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 5.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 15.4
Samples: 246

Max nTPM: 30.1
Min nTPM: 7.7
Std nTPM: 4.0
Median nTPM: 15.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 30.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 26.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 25.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 25.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 24.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 24.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 24.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 24.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 23.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 23.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 22.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 22.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 22.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 22.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 22.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 22.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 22.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 22.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 22.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 21.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 21.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 21.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 21.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 21.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 21.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 21.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 21.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 20.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 20.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 20.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 20.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 20.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 20.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 20.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 20.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 20.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 20.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 20.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 19.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 19.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 19.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 19.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 19.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 19.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 19.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 18.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 18.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 18.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 18.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 18.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 18.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 18.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 18.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 18.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 18.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 18.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 18.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 18.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 18.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 17.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 17.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 17.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 17.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 17.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 17.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 17.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 17.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 17.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 17.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 17.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 17.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 17.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 17.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 17.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 17.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 17.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 17.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 17.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 17.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 16.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 16.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 16.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 16.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 16.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 16.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 16.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 16.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 16.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 16.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 16.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 16.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 16.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 16.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 16.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 16.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 16.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 16.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 16.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 16.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 16.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 16.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 16.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 15.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 15.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 15.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 15.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 15.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 15.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 15.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 15.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 15.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 15.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 15.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 15.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 15.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 15.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 15.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 15.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 15.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 15.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 15.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 15.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 15.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 15.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 14.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 14.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 14.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 14.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 14.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 14.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 14.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 14.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 14.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 14.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 14.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 14.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 14.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 14.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 14.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 14.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 14.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 14.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 13.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 13.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 13.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 13.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 13.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 13.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 13.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 13.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 13.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 13.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 13.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 13.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 13.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 13.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 13.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 13.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 13.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 13.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 13.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 13.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 13.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 13.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 13.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 13.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 13.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 13.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 12.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 12.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 12.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 12.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 12.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 12.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 12.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 12.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 12.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 12.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 12.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 12.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 12.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 12.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 12.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 12.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 12.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 12.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 12.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 12.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 12.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 12.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 12.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 12.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 12.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 12.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 12.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 11.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 11.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 11.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 11.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 11.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 11.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 11.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 11.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 11.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 11.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 11.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 11.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 11.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 11.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 11.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 11.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 11.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 11.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 11.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 10.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 10.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 10.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 10.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 10.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 10.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 10.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 10.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 10.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 10.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 10.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 10.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 10.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 10.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 10.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 10.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 10.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 10.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 9.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 9.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 9.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 9.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 9.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 9.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 8.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 8.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 8.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 8.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 8.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 8.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 7.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 7.7
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Brain - Putamen (basal ganglia)
Average nTPM: 19.1
Samples: 205

Max nTPM: 31.7
Min nTPM: 8.1
Std nTPM: 4.1
Median nTPM: 18.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 31.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 29.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 29.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 28.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 26.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 26.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 26.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 26.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 26.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 26.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 26.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 26.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 25.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 25.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 25.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 25.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 25.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 25.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 25.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 25.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 25.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 24.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 24.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 24.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 24.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 24.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 24.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 24.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 24.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 23.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 23.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 23.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 23.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 23.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 23.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 23.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 23.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 23.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 23.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 23.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 23.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 22.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 22.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 22.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 22.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 22.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 22.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 22.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 22.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 22.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 22.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 21.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 21.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 21.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 21.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 21.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 21.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 21.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 21.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 21.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 21.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 21.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 20.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 20.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 20.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 20.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 20.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 20.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 20.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 20.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 20.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 20.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 20.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 20.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 20.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 20.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 20.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 20.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 20.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 20.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 20.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 20.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 20.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 20.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 19.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 19.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 19.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 19.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 19.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 19.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 19.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 19.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 19.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 19.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 19.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 19.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 19.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 19.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 19.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 19.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 19.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 19.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 18.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 18.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 18.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 18.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 18.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 18.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 18.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 18.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 18.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 18.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 18.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 18.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 18.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 18.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 18.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 18.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 18.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 18.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 18.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 17.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 17.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 17.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 17.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 17.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 17.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 17.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 17.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 17.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 17.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 17.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 17.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 17.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 17.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 17.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 17.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 17.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 16.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 16.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 16.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 16.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 16.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 16.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 16.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 16.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 16.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 16.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 16.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 16.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 16.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 16.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 16.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 16.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 15.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 15.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 15.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 15.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 15.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 15.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 15.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 15.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 15.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 15.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 15.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 15.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 15.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 15.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 15.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 15.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 15.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 14.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 14.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 14.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 14.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 14.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 14.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 14.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 14.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 14.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 14.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 14.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 14.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 14.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 13.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 13.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 13.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 13.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 13.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 13.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 13.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 13.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 13.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 12.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 12.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 12.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 12.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 12.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 11.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 11.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 11.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 10.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 10.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 10.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 8.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

80.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 56.5
FF:10164-103B2 76 years, female 56.5
Nucleus accumbens
Scaled Tags Per Million: 76.4
FF:10037-101F1 23-56 years, mixed 76.4
Putamen
Scaled Tags Per Million: 44.6
FF:10176-103C5 60 years, female 44.6
Globus pallidus
Scaled Tags Per Million: 80.9
FF:10161-103A8 76 years, female 101.5
FF:10175-103C4 60 years, female 60.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.3
Pig sample Sample description nTPM
Caudate
nTPM: 46.6
Samples: 4

Max nTPM: 54.3
Min nTPM: 38.1
Sample A Female 38.1
Sample B Female 47.4
Sample C Male 54.3
Sample D Male 46.7
Putamen
nTPM: 64.3
Samples: 4

Max nTPM: 70.0
Min nTPM: 52.2
Sample A Female 68.1
Sample B Female 52.2
Sample C Male 66.9
Sample D Male 70.0
Septum
nTPM: 44.5
Samples: 4

Max nTPM: 46.7
Min nTPM: 40.9
Sample A Female 46.7
Sample B Female 40.9
Sample C Male 45.0
Sample D Male 45.5
Ventral pallidum
nTPM: 54.5
Samples: 4

Max nTPM: 78.6
Min nTPM: 36.3
Sample A Female 36.3
Sample B Female 46.7
Sample C Male 78.6
Sample D Male 56.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 20.2
Samples: 4

Max nTPM: 24.7
Min nTPM: 16.4
Sample A Male 21.0
Sample B Male 24.7
Sample C Female 16.4
Sample D Female 18.5
Septum
nTPM: 13.9
Samples: 4

Max nTPM: 16.8
Min nTPM: 12.6
Sample A Male 16.8
Sample B Male 12.7
Sample C Female 12.6
Sample D Female 13.6
Ventral forebrain
nTPM: 17.1
Samples: 4

Max nTPM: 19.2
Min nTPM: 14.7
Sample A Male 19.2
Sample B Male 14.7
Sample C Female 17.6
Sample D Female 16.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.2
70593313 Antisense, RP_050407_03_C12, Mouse strain C57BL/6J (56 days, male) 1.3
74988734 Antisense, RP_060315_04_B02, Mouse strain C57BL/6J (56 days, male) 1.1
Pallidum
Expression energy: 1.2
74988734 Antisense, RP_060315_04_B02, Mouse strain C57BL/6J (56 days, male) 1.3
70593313 Antisense, RP_050407_03_C12, Mouse strain C57BL/6J (56 days, male) 1.0

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