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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
304.1
Sample id
Sample description
nTPM
Amygdala nTPM: 304.1
2695
Female, age 67, right hemisphere
421.4
2514
Male, age 75, right hemisphere
324.3
2517
Female, age 94, left hemisphere
270.8
2814
Male, age 76, right hemisphere
254.0
1987
Female, age 91, left hemisphere
249.9
Basal amygdala nTPM: 254.5
2827
Female, age 67, right hemisphere
407.7
2609
Male, age 75, right hemisphere
271.1
2685
Female, age 94, left hemisphere
243.9
2110
Male, age 80, left hemisphere
236.3
1955
Male, age 76, both hemispheres
195.2
2243
Female, age 91, right hemisphere
172.8
Central amygdala nTPM: 292.0
2826
Female, age 94, left hemisphere
538.7
2515
Male, age 75, right hemisphere
308.0
1905
Male, age 76, both hemispheres
234.3
2239
Male, age 80, left hemisphere
192.9
2701
Female, age 91, right hemisphere
186.1
Corticomedial amygdala nTPM: 217.5
2428
Male, age 75, right hemisphere
285.4
2829
Male, age 80, left hemisphere
238.4
2535
Female, age 67, right hemisphere
219.0
2429
Female, age 94, left hemisphere
203.3
2242
Female, age 91, right hemisphere
180.0
2240
Male, age 76, both hemispheres
178.8
Lateral amygdala nTPM: 303.6
2830
Female, age 67, right hemisphere
533.6
2516
Male, age 75, right hemisphere
364.2
2534
Female, age 94, left hemisphere
328.7
2256
Male, age 80, left hemisphere
219.1
1883
Male, age 76, both hemispheres
210.5
2255
Female, age 91, right hemisphere
165.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1230.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 1230.2
Samples: 181
Max nTPM: 3585.7
Min nTPM: 597.0
Std nTPM: 476.5
Median nTPM: 1125.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
3585.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
3471.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
3008.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
2834.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
2744.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
2738.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
2248.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
2145.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
2061.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
2060.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
2030.8
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
1998.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1983.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
1892.8
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
1841.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
1823.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
1786.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
1760.3
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
1744.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
1698.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
1696.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
1692.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
1685.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1670.6
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
1641.9
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
1590.7
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
1589.3
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
1585.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
1482.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
1471.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
1456.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
1445.1
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
1443.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
1431.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
1430.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
1422.1
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
1413.4
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
1413.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1410.7
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
1395.0
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
1393.2
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
1390.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
1388.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1384.0
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
1378.0
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
1377.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
1371.3
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
1370.0
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
1368.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
1368.2
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
1354.0
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
1347.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
1337.5
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
1334.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
1330.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
1329.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
1323.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
1314.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
1312.5
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
1310.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
1309.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
1300.0
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
1288.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
1286.0
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
1281.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
1268.0
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
1263.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
1238.5
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
1217.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
1209.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
1207.5
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
1206.2
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
1203.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
1199.8
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
1198.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
1191.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
1190.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
1185.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
1184.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
1180.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
1174.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
1168.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
1168.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
1167.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
1167.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
1164.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
1156.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
1132.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
1127.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
1126.5
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
1125.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
1124.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
1124.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
1119.9
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
1118.7
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
1108.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
1107.6
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
1105.8
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
1098.4
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
1093.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
1092.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
1089.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
1087.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
1081.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
1079.7
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
1070.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
1069.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
1048.1
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
1044.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
1035.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
1032.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
1028.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
1028.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
1023.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
1023.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
1020.9
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
1009.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
1005.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
996.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
995.9
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
991.9
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
990.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
988.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
988.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
986.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
986.3
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
984.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
984.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
982.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
979.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
977.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
973.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
972.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
958.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
952.4
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
936.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
932.8
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
917.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
917.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
905.3
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
903.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
894.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
890.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
885.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
882.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
881.6
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
878.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
874.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
874.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
861.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
859.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
856.8
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
840.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
832.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
824.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
823.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
821.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
817.0
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
814.0
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
813.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
812.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
811.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
807.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
806.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
801.9
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
800.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
789.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
762.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
759.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
742.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
740.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
695.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
677.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
670.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
668.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
666.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
659.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
656.0
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
630.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
601.7
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
597.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.