HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:1048.3 nTPM
HPA Brain:240.2 nTPM
GTEx:1048.3 nTPM
FANTOM5:35.3 Scaled Tags Per Million
Pig:68.4 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041344Antibody HPA049132Antibody CAB033319
Glial cells LowLowHigh
Neuronal cells LowMediumLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 240.2
Sample id Sample description nTPM
Hippocampus
nTPM: 228.9
1898 Male, age 80, left hemisphere 285.8
2529 Female, age 94, left hemisphere 242.4
1911 Female, age 85, right hemisphere 232.3
2621 Female, age 67, right hemisphere 219.5
1855 Male, age 76, left hemisphere 202.8
2148 Female, age 91, left hemisphere 190.4
Dentate gyrus
nTPM: 224.1
2530 Female, age 94, left hemisphere 288.4
2010 Male, age 76, both hemispheres 276.7
1927 Female, age 91, both hemispheres 216.1
2246 Female, age 85, both hemispheres 191.5
2531 Female, age 67, both hemispheres 191.3
2528 Male, age 74, both hemispheres 180.3
Entorhinal gyrus
nTPM: 218.5
2686 Male, age 75, right hemisphere 271.0
2117 Female, age 91, right hemisphere 223.9
1787 Male, age 76, left hemisphere 218.7
1938 Female, age 85, left hemisphere 215.1
2764 Male, age 80, right hemisphere 207.1
2613 Female, age 94, left hemisphere 175.0
Hippocampus, CA1
nTPM: 223.7
2749 Male, age 80, left hemisphere 275.1
2045 Male, age 76, both hemispheres 239.8
1873 Female, age 85, both hemispheres 212.8
2082 Female, age 91, right hemisphere 205.7
2527 Male, age 74, both hemispheres 185.0
Hippocampus, CA2
nTPM: 230.0
1963 Male, age 80, left hemisphere 278.3
1892 Male, age 76, both hemispheres 268.0
2437 Female, age 94, left hemisphere 218.5
1940 Female, age 85, left hemisphere 214.3
2113 Female, age 91, right hemisphere 205.0
2249 Male, age 74, both hemispheres 196.1
Hippocampus, CA3
nTPM: 211.7
1867 Male, age 76, both hemispheres 278.7
1891 Female, age 85, both hemispheres 252.9
2137 Male, age 80, left hemisphere 227.9
2861 Female, age 67, both hemispheres 200.4
2436 Male, age 74, both hemispheres 178.2
2620 Female, age 94, left hemisphere 132.0
Parahippocampal cortex
nTPM: 201.3
2018 Male, age 76, both hemispheres 318.8
1850 Male, age 80, both hemispheres 219.1
1933 Female, age 85, both hemispheres 215.6
2250 Female, age 67, right hemisphere 202.0
1990 Female, age 91, right hemisphere 195.3
2245 Female, age 91, both hemispheres 194.4
2692 Male, age 74, both hemispheres 183.2
2532 Female, age 72, left hemisphere 174.4
2693 Female, age 94, both hemispheres 155.4
2622 Female, age 67, right hemisphere 154.7
Perirhinal gyrus
nTPM: 202.6
1841 Female, age 85, right hemisphere 236.0
1847 Female, age 91, left hemisphere 216.0
2848 Male, age 76, right hemisphere 205.4
1794 Male, age 80, right hemisphere 199.0
2521 Female, age 94, right hemisphere 156.5
Subiculum
nTPM: 240.2
2042 Male, age 76, both hemispheres 303.2
2438 Female, age 94, left hemisphere 288.0
1901 Male, age 80, both hemispheres 243.0
1977 Female, age 85, both hemispheres 231.5
2729 Female, age 91, right hemisphere 198.5
2619 Male, age 74, both hemispheres 177.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1048.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1048.3
Samples: 255

Max nTPM: 2720.7
Min nTPM: 412.0
Std nTPM: 355.2
Median nTPM: 970.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2720.7
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2580.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2532.0
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2147.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 2044.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2020.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1863.3
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1833.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1812.9
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 1774.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1771.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 35.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.3
FF:10169-103B7 60 years, female 49.8
FF:10153-102I9 76 years, female 20.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 68.4
Pig sample Sample description nTPM
Subiculum
nTPM: 58.1
Samples: 4

Max nTPM: 78.3
Min nTPM: 48.1
Sample A Female 78.3
Sample B Female 55.4
Sample C Male 48.1
Sample D Male 50.4
Dorsal hippocampus
nTPM: 68.4
Samples: 4

Max nTPM: 86.9
Min nTPM: 52.1
Sample A Female 86.9
Sample B Female 65.0
Sample C Male 69.4
Sample D Male 52.1
Entorhinal cortex
nTPM: 60.9
Samples: 4

Max nTPM: 77.7
Min nTPM: 45.5
Sample A Female 52.1
Sample B Female 77.7
Sample C Male 68.1
Sample D Male 45.5
Ventral hippocampus
nTPM: 60.2
Samples: 4

Max nTPM: 65.0
Min nTPM: 57.6
Sample A Female 65.0
Sample B Female 57.6
Sample C Male 59.1
Sample D Male 59.0

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