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  • TISSUE

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  • PMP2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:183.5 nTPM
HPA Brain:266.0 nTPM
GTEx:183.5 nTPM
Pig:5.2 nTPM
Mouse:0.2 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

266.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 117.4
2226 Male, age 75, left hemisphere 136.1
1961 Female, age 42, unknown 98.7
Dorsomedial nucleus
nTPM: 152.4
1989 Male, age 62, unknown 160.4
2017 Female, age 42, unknown 153.8
2041 Female, age 72, unknown 142.9
Lateral hypothalamic area
nTPM: 180.8
1791 Male, age 80, right hemisphere 196.1
2412 Male, age 62, unknown 181.8
2228 Male, age 66, unknown 180.2
2271 Male, age 75, both hemispheres 165.0
Mammillary body
nTPM: 266.0
1834 Female, age 42, unknown 379.6
2413 Male, age 66, unknown 298.9
1945 Male, age 80, right hemisphere 247.2
1948 Female, age 72, unknown 219.4
1923 Female, age 72, unknown 185.1
Paraventricular nucleus
nTPM: 183.0
2700 Male, age 62, unknown 183.0
Preoptic area
nTPM: 165.2
1861 Female, age 42, unknown 190.5
1907 Male, age 80, right hemisphere 158.5
2414 Female, age 72, unknown 146.5
Supraoptic nucleus
nTPM: 246.1
1894 Female, age 72, unknown 361.2
2043 Male, age 62, unknown 248.2
2835 Female, age 72, unknown 128.8
Ventromedial nucleus
nTPM: 97.8
1822 Female, age 42, unknown 107.6
1982 Female, age 72, unknown 88.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

183.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 183.5
Samples: 257

Max nTPM: 546.3
Min nTPM: 43.9
Std nTPM: 102.1
Median nTPM: 158.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 546.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 536.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 533.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 531.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 524.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 502.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 498.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 477.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 445.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 410.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 410.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 409.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 376.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 370.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 369.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 369.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 367.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 366.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 347.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 342.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 341.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 333.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 328.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 324.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 322.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 321.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 318.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 310.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 308.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 305.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 303.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 299.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 297.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 296.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 294.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 291.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 283.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 282.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 282.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 279.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 276.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 273.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 270.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 269.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 267.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 265.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 260.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 253.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 252.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 252.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 251.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 250.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 248.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 247.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 246.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 244.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 244.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 241.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 240.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 237.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 235.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 233.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 232.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 232.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 232.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 230.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 230.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 229.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 229.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 226.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 224.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 224.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 223.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 222.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 221.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 221.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 221.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 221.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 220.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 215.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 214.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 211.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 210.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 209.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 208.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 206.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 203.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 201.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 201.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 201.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 200.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 199.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 195.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 195.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 193.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 193.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 192.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 189.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 189.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 186.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 184.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 183.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 182.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 182.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 181.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 178.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 178.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 177.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 175.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 175.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 175.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 174.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 171.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 171.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 168.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 167.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 166.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 166.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 165.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 164.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 164.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 164.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 164.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 163.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 163.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 160.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 159.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 159.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 158.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 157.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 157.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 153.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 153.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 151.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 150.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 150.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 149.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 148.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 145.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 144.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 143.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 141.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 140.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 140.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 139.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 138.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 138.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 137.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 137.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 136.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 134.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 133.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 132.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 131.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 131.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 129.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 129.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 129.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 128.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 127.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 126.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 126.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 124.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 123.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 122.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 121.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 121.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 121.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 121.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 119.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 118.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 118.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 117.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 117.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 116.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 115.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 115.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 114.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 114.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 114.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 114.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 113.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 113.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 112.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 111.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 111.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 111.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 111.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 110.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 109.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 109.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 109.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 108.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 107.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 107.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 105.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 105.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 105.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 104.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 103.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 103.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 103.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 102.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 101.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 101.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 100.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 100.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 99.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 99.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 98.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 98.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 98.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 97.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 96.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 96.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 95.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 94.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 93.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 93.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 92.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 92.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 92.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 92.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 92.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 91.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 91.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 88.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 88.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 87.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 86.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 85.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 85.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 84.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 83.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 83.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 81.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 80.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 80.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 79.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 78.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 78.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 76.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 76.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 74.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 72.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 70.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 69.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 63.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 62.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 60.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 60.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 59.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 59.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 58.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 55.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 48.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 43.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 5.2
Samples: 4

Max nTPM: 10.3
Min nTPM: 2.0
Sample A Female 2.0
Sample B Female 4.5
Sample C Male 3.9
Sample D Male 10.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.0
Sample A Male 0.4
Sample B Male 0.2
Sample C Female 0.0
Sample D Female 0.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
70785780 Antisense, RP_050706_02_E09, Mouse strain C57BL/6J (56 days, male) 0.0

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