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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
301.6
nTPM
HPA Brain:
346.5
nTPM
GTEx:
301.6
nTPM
FANTOM5:
674.7
Scaled Tags Per Million
Pig:
138.9
nTPM
Mouse:
0.1
nTPM
Allen mouse:
0.0
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
346.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 222.4
1870
Female, age 42, unknown
278.8
2828
Female, age 72, unknown
265.5
2586
Male, age 75, left hemisphere
244.4
2666
Male, age 74, left hemisphere
232.0
1833
Male, age 53, unknown
225.1
2019
Male, age 18, unknown
218.2
2411
Female, age 72, unknown
208.6
1830
Male, age 51, unknown
206.4
1827
Male, age 72, unknown
199.5
2219
Male, age 76, both hemispheres
145.8
Dorsal raphe nucleus nTPM: 303.1
2016
Female, age 72, unknown
403.5
1828
Male, age 53, unknown
339.5
2047
Male, age 72, unknown
283.7
2298
Female, age 72, unknown
271.9
2750
Male, age 76, both hemispheres
217.1
Inferior colliculus nTPM: 330.0
1848
Female, age 42, unknown
376.2
2849
Male, age 72, unknown
346.3
2097
Female, age 72, unknown
338.2
1890
Male, age 53, unknown
259.3
Median raphe nucleus nTPM: 201.8
2220
Male, age 76, midline
201.8
Periaquaductal grey, anterior nTPM: 219.9
2502
Female, age 75, unknown
248.4
1795
Male, age 51, unknown
210.7
1947
Male, age 18, unknown
200.6
Periaquaductal grey, dorsal nTPM: 346.5
2850
Male, age 76, both hemispheres
403.6
1840
Male, age 53, unknown
393.6
2464
Female, age 72, unknown
316.0
1831
Male, age 72, unknown
272.9
Periaquaductal grey, lateral nTPM: 268.6
2140
Male, age 76, both hemispheres
338.0
2053
Male, age 18, unknown
287.2
2272
Male, age 74, both hemispheres
180.6
Pretectal area nTPM: 217.5
2224
Female, age 72, unknown
279.9
1817
Female, age 42, unknown
261.0
2825
Male, age 18, unknown
231.5
2316
Male, age 76, right hemisphere
228.4
2407
Male, age 75, both hemispheres
221.9
1815
Male, age 53, unknown
221.8
1944
Female, age 72, unknown
210.3
2273
Male, age 74, both hemispheres
204.9
2667
Female, age 75, unknown
190.5
1816
Male, age 51, unknown
185.1
2007
Male, age 72, unknown
156.8
Red nucleus nTPM: 288.5
1954
Female, age 42, unknown
403.1
2227
Male, age 72, unknown
350.2
2769
Male, age 72, unknown
343.5
2503
Female, age 72, unknown
326.1
1865
Male, age 51, unknown
324.4
1821
Female, age 72, unknown
316.4
1904
Male, age 53, unknown
294.9
2823
Male, age 76, right hemisphere
280.0
2725
Female, age 75, unknown
235.9
2588
Male, age 74, left hemisphere
212.8
2785
Male, age 18, unknown
208.2
2584
Male, age 75, left hemisphere
166.4
Substantia nigra nTPM: 219.8
2699
Male, age 18, unknown
366.1
1889
Female, age 72, unknown
252.9
2241
Male, age 72, unknown
212.8
1941
Male, age 53, unknown
209.4
1916
Female, age 42, unknown
200.2
2583
Male, age 75, right hemisphere
197.8
1851
Male, age 51, unknown
196.2
2409
Female, age 72, unknown
194.2
2590
Female, age 75, unknown
190.6
2665
Male, age 74, both hemispheres
177.3
Superior colliculus nTPM: 230.8
2668
Female, age 75, unknown
300.9
2664
Male, age 75, both hemispheres
294.5
1995
Male, age 72, unknown
277.5
2587
Male, age 74, left hemisphere
242.6
1839
Male, age 51, unknown
236.8
1913
Female, age 42, unknown
226.4
2087
Female, age 72, unknown
215.7
1796
Male, age 53, unknown
181.2
1895
Male, age 76, right hemisphere
168.0
2261
Male, age 18, unknown
164.4
Ventral tegmental area nTPM: 254.6
2223
Female, age 72, unknown
314.8
1942
Male, age 51, unknown
290.0
2021
Male, age 53, unknown
275.2
1915
Female, age 42, unknown
251.0
2410
Female, age 72, unknown
207.5
2218
Male, age 76, both hemispheres
189.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
301.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 301.6
Samples: 139
Max nTPM: 869.5
Min nTPM: 54.5
Std nTPM: 141.9
Median nTPM: 276.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
869.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
698.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
683.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
680.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
610.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
600.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
582.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
575.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
550.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
545.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
534.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
523.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
517.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
516.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
513.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
511.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
484.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
463.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
459.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
458.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
441.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
440.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
440.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
431.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
423.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
418.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
416.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
393.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
392.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
377.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
377.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
376.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
372.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
370.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
368.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
365.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
361.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
360.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
357.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
346.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
344.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
343.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
342.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
342.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
340.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
337.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
332.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
331.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
330.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
328.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
327.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
323.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
322.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
322.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
321.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
320.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
316.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
304.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
303.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
302.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
295.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
295.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
294.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
292.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
287.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
285.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
282.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
281.8
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
281.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
276.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
272.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
269.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
269.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
267.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
264.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
263.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
262.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
255.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
248.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
243.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
240.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
239.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
238.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
238.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
234.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
230.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
229.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
226.5
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
222.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
220.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
218.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
218.6
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
218.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
218.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
217.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
216.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
215.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
214.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
211.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
205.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
204.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
201.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
200.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
198.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
196.5
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
194.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
192.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
190.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
181.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
180.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
178.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
177.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
175.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
175.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
171.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
168.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
167.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
167.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
167.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
165.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
165.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
164.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
163.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
161.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
160.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
154.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
150.8
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
150.1
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
146.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
143.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
142.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
142.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
136.7
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
129.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
114.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
112.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
84.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
76.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
54.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
0.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 0.1
Samples: 4
Max nTPM: 0.3
Min nTPM: 0.0
Sample A
Male
0.0
Sample B
Male
0.3
Sample C
Female
0.1
Sample D
Female
0.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.