On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
790.8
nTPM
HPA Brain:
497.4
nTPM
GTEx:
790.8
nTPM
Mouse:
271.3
nTPM
Rat:
14.5
nTPM
Pig:
418.9
nTPM
HYPOTHALAMUS - SINGLE NUCLEI RNA EXPRESSIONi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NEURONSi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Unassigned AVP+
c-2
Excitatory (VGLUT2) TAC1+
c-3
Inhibitory (GAD1/2) AVP+
c-4
Unassigned AVP+
c-5
Excitatory (VGLUT2)
c-6
Excitatory (VGLUT2)
c-7
Inhibitory (GAD1/2) DRD2+ L...
c-8
Inhibitory (GAD1/2) ESR1+
c-9
Excitatory (VGLUT2)
c-10
Excitatory (VGLUT2) TAC1+
c-11
Inhibitory (GAD1/2) ESR1+
c-12
Inhibitory (GAD1/2) DRD1+ L...
c-13
Excitatory (VGLUT2)
c-14
Inhibitory (GAD1/2)
c-15
Excitatory (VGLUT2)
c-16
Excitatory (VGLUT2)
c-17
Inhibitory (GAD1/2)
c-18
Inhibitory (GAD1/2) GAL+
c-19
Excitatory (VGLUT1)
c-20
Excitatory (VGLUT2) ESR1+
c-21
Inhibitory (GAD1/2) DRD1+ L...
c-22
Inhibitory (GAD1/2) RORB+ K
c-23
Inhibitory (GAD1/2) SST+ NP
c-24
Inhibitory (GAD1/2) CXCL14+
c-25
Excitatory (VGLUT2)
c-26
Inhibitory (GAD1/2)
c-27
Excitatory (VGLUT2)
c-28
Unassigned
c-29
Inhibitory (GAD1/2) ESR1+
c-30
Excitatory (VGLUT2)
c-31
Excitatory (VGLUT1/2)
c-32
Inhibitory (GAD1/2) GAL+
c-33
Excitatory (VGLUT2)
c-34
Monoaminergic Inhibitory (G...
c-35
Excitatory (VGLUT2) TAC1+
c-36
Inhibitory (GAD1/2) LHX6+ T...
c-37
Excitatory (VGLUT2)
c-38
Inhibitory (GAD1/2) SST+
c-39
Inhibitory (GAD1/2) MEIS2+
c-40
Unassigned
c-41
Inhibitory (GAD1/2) SST+
c-42
Excitatory (VGLUT1)
c-43
Excitatory (VGLUT2) TAC1+
c-44
Unassigned AVP+
c-45
Inhibitory (GAD1/2) LAMP5+ ...
c-46
Excitatory (VGLUT2)
c-47
Inhibitory (GAD1/2) LHX6+ T...
c-48
Parvocellular CRH+ AVP+ OXT
c-49
Magnocellular TH+ AVP+ OXT+
c-50
Excitatory (VGLUT1)
c-51
Parvocellular (VGLUT2) AVP...
c-52
Inhibitory (GAD1/2) NOS1+ M...
c-53
Inhibitory (GAD1/2) TAC1+ D...
c-54
Inhibitory (GAD1/2) SST+
c-55
Excitatory (VGLUT1)
c-56
Excitatory (VGLUT1) ETV1+ Z...
c-57
HCRT+ RXF4+
c-58
Excitatory (VGLUT1/2) TAC1+
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NON-NEURONALi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Oligodendrocytes
c-2
Oligodendrocytes
c-3
Oligodendrocytes
c-4
Astrocytes (LHX2+)
c-5
Microglia
c-6
Oligodendrocytes
c-7
Astrocytes (CD44+)
c-8
Oligodendrocytes
c-9
Oligodendrocyte progenitor ...
c-10
Microglia
c-11
Oligodendrocytes
c-12
Astrocytes
c-13
Astrocytes (CD44+)
c-14
Oligodendrocyte progenitor ...
c-15
Oligodendrocyte progenitor ...
c-16
Microglia
c-17
Oligodendrocytes
c-18
Oligodendrocyte progenitor ...
c-19
Astrocytes
c-20
Fibroblasts
c-21
Oligodendrocytes
c-22
Oligodendrocytes
c-23
Ependymal cells
c-24
Vascular endothelial cells
c-25
Astrocytes (LHX2+)
c-26
Macrophages
c-27
Astrocytes
c-28
T-cells
c-29
Vascular smooth muscle cell
c-30
Fibroblasts (BNC2+ KCNMA1+ ...
c-31
Pericytes
c-32
Oligodendrocyte progenitor ...
c-33
Immature oligodendrocytes
c-34
Oligodendrocyte progenitor ...
c-35
NK-cells
c-36
Mural cells
c-37
Monocytes
c-38
Fibroblasts (BNC2+ TRPM3+)
c-39
Lymphocytes
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
497.4
Sample id
Sample description
nTPM
Arcuate nucleus nTPM: 375.3
1961
Female, age 42, unknown
402.1
2226
Male, age 75, left hemisphere
348.5
Dorsomedial nucleus nTPM: 351.2
2017
Female, age 42, unknown
364.6
2041
Female, age 72, unknown
362.9
1989
Male, age 62, unknown
326.0
Lateral hypothalamic area nTPM: 433.2
2228
Male, age 66, unknown
481.7
1791
Male, age 80, right hemisphere
431.0
2412
Male, age 62, unknown
430.1
2271
Male, age 75, both hemispheres
389.9
Mammillary body nTPM: 419.3
1945
Male, age 80, right hemisphere
454.6
1834
Female, age 42, unknown
449.0
1948
Female, age 72, unknown
416.0
1923
Female, age 72, unknown
413.7
2413
Male, age 66, unknown
363.5
Paraventricular nucleus nTPM: 440.7
2700
Male, age 62, unknown
440.7
Preoptic area nTPM: 392.6
1861
Female, age 42, unknown
450.0
2414
Female, age 72, unknown
384.1
1907
Male, age 80, right hemisphere
343.8
Supraoptic nucleus nTPM: 497.4
1894
Female, age 72, unknown
561.7
2043
Male, age 62, unknown
486.0
2835
Female, age 72, unknown
444.4
Ventromedial nucleus nTPM: 433.0
1982
Female, age 72, unknown
437.5
1822
Female, age 42, unknown
428.6
HYPOTHALAMUS - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
790.8
GTEx sample id
Sample description
nTPM
Brain - Hypothalamus Average nTPM: 790.8
Samples: 257
Max nTPM: 2360.1
Min nTPM: 390.0
Std nTPM: 273.7
Median nTPM: 732.6
GTEX-11ZU8-0011-R8b-SM-GHWOM
60-69 years, male
2360.1
GTEX-139TS-0011-R8a-SM-5J1NP
60-69 years, male
1953.7
GTEX-11DZ1-0011-R8b-SM-DNZZI
50-59 years, male
1722.8
GTEX-14753-0011-R8b-SM-5S2U1
60-69 years, male
1710.8
GTEX-1JN6P-0011-R8a-SM-F6499
60-69 years, male
1689.4
GTEX-11EMC-0011-R8b-SM-DO91Z
60-69 years, female
1562.7
GTEX-15DCD-0011-R8b-SM-7KUEF
70-79 years, female
1545.8
GTEX-X4XY-0011-R8A-SM-46MVC
60-69 years, male
1525.9
GTEX-N7MS-0011-R8a-SM-2YUMK
60-69 years, male
1508.6
GTEX-1GN1V-0011-R8a-SM-CKZNV
60-69 years, male
1489.7
GTEX-144GL-0011-R8a-SM-5Q5B1
50-59 years, male
1456.3
GTEX-WL46-0011-R8B-SM-H7OHG
50-59 years, male
1455.6
GTEX-RNOR-0011-R8A-SM-EZ6MN
50-59 years, female
1364.9
GTEX-11EI6-0011-R8a-SM-DO93M
60-69 years, male
1361.7
GTEX-1QEPI-0011-R8a-SM-G8LLI
60-69 years, female
1326.0
GTEX-1B8SF-0011-R8b-SM-7P8SX
60-69 years, male
1322.1
GTEX-12126-0011-R8a-SM-GI4WV
20-29 years, male
1269.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4
60-69 years, male
1254.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ
60-69 years, male
1246.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT
50-59 years, male
1204.0
GTEX-1CAMQ-0011-R8a-SM-ARU85
40-49 years, male
1165.9
GTEX-1B8SG-0011-R8b-SM-7IGNW
50-59 years, male
1162.1
GTEX-1H23P-0011-R8b-SM-A9G1G
60-69 years, male
1142.5
GTEX-1PPGY-0011-R8a-SM-F649R
60-69 years, male
1139.4
GTEX-1O9I2-0011-R8a-SM-F2TAX
50-59 years, male
1137.4
GTEX-1LVAO-0011-R8a-SM-F3K5J
60-69 years, male
1120.3
GTEX-12WSD-0011-R8b-SM-9QEGI
60-69 years, female
1103.7
GTEX-13NYS-0011-R8a-SM-5MR5H
60-69 years, male
1094.2
GTEX-1C6WA-0011-R8b-SM-7P8S7
60-69 years, male
1090.5
GTEX-QVJO-0011-R8A-SM-447C7
60-69 years, female
1054.4
GTEX-1I1GS-0011-R8b-SM-CKZPE
60-69 years, male
1052.7
GTEX-12WSA-0011-R8a-SM-5P9EX
60-69 years, male
1046.7
GTEX-11H98-0011-R8a-SM-5NQ8V
50-59 years, male
1028.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA
70-79 years, male
1019.6
GTEX-WWYW-0011-R8A-SM-3NB3S
50-59 years, female
1000.6
GTEX-1RQED-0011-R8a-SM-G8LKO
60-69 years, male
1000.3
GTEX-13SLX-0011-R8b-SM-5PNWZ
50-59 years, female
996.6
GTEX-XMD1-0011-R8A-SM-4AT48
60-69 years, male
993.6
GTEX-1CAV2-0011-R8a-SM-GRR24
40-49 years, female
986.9
GTEX-1C64N-0011-R8b-SM-7MGXE
50-59 years, male
986.6
GTEX-14E7W-0011-R8b-SM-GQ1D6
70-79 years, male
978.4
GTEX-ZYY3-0011-R8a-SM-H7OHF
60-69 years, female
972.7
GTEX-13FLW-0011-R8b-SM-5J1MZ
50-59 years, male
971.4
GTEX-1F6I4-0011-R8a-SM-9QEIA
60-69 years, male
958.8
GTEX-1F75A-0011-R8a-SM-CL539
50-59 years, male
958.3
GTEX-1N5O9-0011-R8a-SM-F649C
60-69 years, male
957.8
GTEX-1H3O1-0011-R8a-SM-CL555
60-69 years, male
955.9
GTEX-11DYG-0011-R8a-SM-DO93F
60-69 years, male
955.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT
50-59 years, male
946.6
GTEX-13OVJ-0011-R8b-SM-5L3FS
50-59 years, female
941.9
GTEX-1JMQK-0011-R8a-SM-G8LMS
60-69 years, male
940.7
GTEX-1JJEA-0011-R8a-SM-F3419
60-69 years, male
935.8
GTEX-1IY9M-0011-R8a-SM-EYYWW
60-69 years, male
923.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE
40-49 years, female
922.0
GTEX-1GN1U-0011-R8a-SM-CL537
50-59 years, female
918.0
GTEX-1QP6S-0011-R8a-SM-F649M
40-49 years, male
916.8
GTEX-1CB4H-0011-R8b-SM-CJI26
60-69 years, female
916.4
GTEX-1313W-0011-R8a-SM-5DUVM
50-59 years, female
916.0
GTEX-WVLH-0011-R8A-SM-3MJFC
50-59 years, male
901.5
GTEX-132Q8-0011-R8b-SM-5DUWX
60-69 years, male
894.0
GTEX-1CB4J-0011-R8a-SM-9QEHU
60-69 years, male
890.8
GTEX-1N2DW-0011-R8a-SM-EY5YD
50-59 years, male
889.6
GTEX-1POEN-0011-R8b-SM-F647O
30-39 years, female
887.3
GTEX-13X6I-0011-R8a-SM-5PNZF
60-69 years, male
880.2
GTEX-1R9K4-0011-R8b-SM-F649L
60-69 years, male
876.7
GTEX-Z93S-0011-R8a-SM-4RGNL
50-59 years, male
873.7
GTEX-ZF28-0011-R8a-SM-4WWFW
60-69 years, male
867.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ
50-59 years, male
862.9
GTEX-1HFI6-0011-R8a-SM-ARZLP
40-49 years, male
855.1
GTEX-1H1CY-0011-R8b-SM-CJI31
60-69 years, female
852.3
GTEX-1JN1M-0011-R8b-SM-F6485
60-69 years, female
847.1
GTEX-WHSE-0011-R8A-SM-3P5Z1
20-29 years, male
842.3
GTEX-15SHU-0011-R8a-SM-H6Q7V
40-49 years, female
839.8
GTEX-11TTK-0011-R8b-SM-DO111
60-69 years, female
837.4
GTEX-1CB4G-0011-R8b-SM-9WG7H
60-69 years, male
833.4
GTEX-T6MN-0011-R8A-SM-32QP3
50-59 years, male
826.4
GTEX-1GMR8-0011-R8a-SM-CKZNX
50-59 years, female
823.6
GTEX-145MH-0011-R8a-SM-5PNUL
50-59 years, male
823.1
GTEX-13VXU-0011-R8b-SM-GJ3RR
50-59 years, male
821.5
GTEX-18465-0011-R8b-SM-7LG6O
50-59 years, male
820.7
GTEX-1EMGI-0011-R8b-SM-9QEID
60-69 years, male
819.5
GTEX-1JMPZ-0011-R8b-SM-F341A
30-39 years, male
819.4
GTEX-QDT8-0011-R8A-SM-G8W63
30-39 years, female
819.1
GTEX-ZAK1-0011-R8a-SM-H7OGE
50-59 years, female
819.0
GTEX-17EVQ-0011-R8a-SM-7189T
70-79 years, male
817.4
GTEX-1HCU6-0011-R8a-SM-CJI3R
60-69 years, female
814.4
GTEX-15G19-0011-R8b-SM-7KUL1
60-69 years, male
810.8
GTEX-P44H-0011-R8A-SM-2XCEL
40-49 years, male
810.5
GTEX-1HBPH-0011-R8b-SM-CL556
40-49 years, female
808.4
GTEX-1F75W-0011-R8a-SM-9QEI4
60-69 years, male
807.5
GTEX-1NV5F-0011-R8b-SM-F647Z
60-69 years, female
806.4
GTEX-12696-0011-R8a-SM-GINAP
60-69 years, male
806.1
GTEX-15CHQ-0011-R8b-SM-CNPO4
60-69 years, male
804.0
GTEX-13X6J-0011-R8b-SM-5PNUA
50-59 years, male
801.0
GTEX-1RAZS-0011-R8a-SM-F2TBI
50-59 years, male
798.8
GTEX-1RLM8-0011-R8a-SM-EYYXR
50-59 years, male
798.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ
60-69 years, male
796.1
GTEX-1445S-0011-R8a-SM-5PNWX
60-69 years, male
793.0
GTEX-1LH75-0011-R8b-SM-F2TB2
50-59 years, female
791.0
GTEX-13QJC-0011-R8b-SM-5S2U6
60-69 years, female
789.6
GTEX-1HGF4-0011-R8b-SM-CKZP9
60-69 years, male
789.5
GTEX-PWO3-0011-R8A-SM-2I5GD
60-69 years, female
789.5
GTEX-15EO6-0011-R8a-SM-H6Q6R
50-59 years, male
788.8
GTEX-131XH-0011-R8a-SM-5EGLL
50-59 years, male
788.2
GTEX-ZAB4-0011-R8b-SM-4SOKF
40-49 years, male
787.7
GTEX-1JMOU-0011-R8b-SM-F2TA9
60-69 years, female
784.6
GTEX-16XZZ-0011-R8b-SM-7LT8S
60-69 years, male
782.1
GTEX-YJ89-0011-R8b-SM-4SOK8
60-69 years, male
778.1
GTEX-15RJE-0011-R8a-SM-H7OGM
40-49 years, male
773.9
GTEX-NPJ8-0011-R8a-SM-2HMLG
40-49 years, male
773.3
GTEX-S7SE-0011-R8A-SM-F649T
50-59 years, male
768.3
GTEX-1HT8W-0011-R8b-SM-CM2SX
30-39 years, male
763.7
GTEX-QVUS-0011-R8A-SM-3GAD7
60-69 years, female
762.1
GTEX-1A3MX-0011-R8a-SM-7P8PI
60-69 years, male
760.8
GTEX-1A8G7-0011-R8a-SM-7P8S6
60-69 years, male
755.4
GTEX-1H1DG-0011-R8a-SM-CL54Z
70-79 years, male
752.1
GTEX-11ZUS-0011-R8a-SM-5BC73
30-39 years, male
749.7
GTEX-13OVL-0011-R8a-SM-5L3HH
50-59 years, male
748.0
GTEX-1192X-0011-R8b-SM-DO11U
50-59 years, male
746.7
GTEX-1GZ4I-0011-R8b-SM-9WG76
50-59 years, male
746.0
GTEX-1GZHY-0011-R8b-SM-9OSWK
50-59 years, female
743.6
GTEX-11NV4-0011-R8b-SM-GHWO4
60-69 years, male
742.2
GTEX-ZUA1-0011-R8b-SM-51MST
40-49 years, male
742.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO
40-49 years, male
738.2
GTEX-11GSP-0011-R8b-SM-5NQ79
60-69 years, female
736.2
GTEX-13X6K-0011-R8b-SM-5PNZ4
60-69 years, female
735.0
GTEX-1LSVX-0011-R8a-SM-F2TB3
60-69 years, male
733.8
GTEX-1A8G6-0011-R8a-SM-7P8PD
60-69 years, male
732.7
GTEX-1IKOH-0011-R8a-SM-A9SKG
60-69 years, female
732.6
GTEX-14JIY-0011-R8a-SM-6AJAP
60-69 years, male
731.3
GTEX-NL4W-0011-R8a-SM-2I3G4
50-59 years, male
730.9
GTEX-14LZ3-0011-R8b-SM-COH3M
60-69 years, female
725.4
GTEX-1B8L1-0011-R8b-SM-7P8ST
60-69 years, male
722.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6
60-69 years, male
721.1
GTEX-OXRN-0011-R8A-SM-E9TI1
50-59 years, male
712.8
GTEX-13QIC-0011-R8b-SM-5O9CV
60-69 years, female
711.3
GTEX-1B933-0011-R8a-SM-9QEGX
50-59 years, female
707.2
GTEX-13CIG-0011-R8b-SM-5LZX5
50-59 years, male
704.8
GTEX-13OW5-0011-R8a-SM-5L3GQ
60-69 years, male
703.6
GTEX-1HBPI-0011-R8a-SM-A9G1S
50-59 years, male
702.6
GTEX-RVPV-0011-R8A-SM-F21II
60-69 years, male
702.5
GTEX-117XS-0011-R8b-SM-GHWOD
60-69 years, male
701.5
GTEX-13FLV-0011-R8a-SM-5LZZE
50-59 years, male
701.0
GTEX-ZVZQ-0011-R8a-SM-51MR5
60-69 years, female
700.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW
50-59 years, male
699.9
GTEX-13112-0011-R8b-SM-664OV
50-59 years, male
697.5
GTEX-ZVT3-0011-R8b-SM-57WDJ
60-69 years, female
693.6
GTEX-1F52S-0011-R8a-SM-9OSXA
60-69 years, female
686.9
GTEX-1F88E-0011-R8a-SM-CJI2H
60-69 years, female
686.7
GTEX-13PDP-0011-R8b-SM-5O9CS
60-69 years, male
686.6
GTEX-1N2EF-0011-R8a-SM-F6481
60-69 years, male
685.8
GTEX-1RQEC-0011-R8b-SM-F648X
60-69 years, male
685.4
GTEX-X261-0011-R8A-SM-4E3I5
50-59 years, male
685.4
GTEX-1IKK5-0011-R8b-SM-CJI45
60-69 years, male
682.6
GTEX-1I1CD-0011-R8b-SM-CJI3X
60-69 years, female
680.0
GTEX-111FC-0011-R8b-SM-GI4VS
60-69 years, male
678.8
GTEX-1LKK1-0011-R8a-SM-F341O
50-59 years, female
678.2
GTEX-1MA7X-0011-R8a-SM-G9EQD
60-69 years, male
674.6
GTEX-1BAJH-0011-R8a-SM-7MXUB
70-79 years, male
674.5
GTEX-11O72-0011-R8a-SM-GJ3R9
40-49 years, male
673.5
GTEX-11ZTS-0011-R8a-SM-57WDI
60-69 years, female
672.7
GTEX-11OF3-0011-R8b-SM-57WCS
60-69 years, male
670.1
GTEX-11DXY-0011-R8a-SM-DO11M
60-69 years, male
668.6
GTEX-1R9PO-0011-R8a-SM-F2TA3
60-69 years, female
667.0
GTEX-14PN4-0011-R8a-SM-6EU1H
50-59 years, male
666.4
GTEX-17F97-0011-R8a-SM-7DUET
50-59 years, male
665.5
GTEX-13NYB-0011-R8a-SM-5KM4R
40-49 years, male
662.2
GTEX-1GF9W-0011-R8b-SM-9QEIR
60-69 years, male
661.8
GTEX-13O3Q-0011-R8b-SM-5KM2J
50-59 years, male
661.4
GTEX-13O3O-0011-R8b-SM-5LUAL
60-69 years, female
661.2
GTEX-13FXS-0011-R8a-SM-5J1MN
50-59 years, male
658.8
GTEX-1E2YA-0011-R8a-SM-CKZNG
50-59 years, male
658.4
GTEX-YFC4-0011-R8a-SM-4SOK3
40-49 years, female
658.3
GTEX-14C5O-0011-R8a-SM-5YYAG
60-69 years, male
657.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG
60-69 years, female
647.3
GTEX-1QMI2-0011-R8a-SM-F3429
60-69 years, male
644.5
GTEX-117YW-0011-R8a-SM-GINAB
50-59 years, male
643.1
GTEX-16GPK-0011-R8a-SM-79OMQ
60-69 years, male
641.5
GTEX-17HII-0011-R8a-SM-79OK6
50-59 years, male
637.7
GTEX-X4XX-0011-R8B-SM-46MWM
60-69 years, male
635.2
GTEX-145LU-0011-R8b-SM-5PNZG
50-59 years, male
630.3
GTEX-1MCQQ-0011-R8b-SM-F341H
60-69 years, male
627.5
GTEX-13JVG-0011-R8a-SM-5KM3E
60-69 years, male
627.0
GTEX-16YQH-0011-R8a-SM-7DUFB
30-39 years, male
625.9
GTEX-1I1HK-0011-R8b-SM-E8VN9
60-69 years, male
622.7
GTEX-1477Z-0011-R8b-SM-5S2RG
60-69 years, male
622.6
GTEX-16Z82-0011-R8a-SM-7DUEX
60-69 years, male
622.0
GTEX-1IDJH-0011-R8b-SM-ARZLL
70-79 years, male
620.6
GTEX-14PQA-0011-R8b-SM-6AJAB
50-59 years, female
618.6
GTEX-131XW-0011-R8a-SM-5DUWY
50-59 years, female
618.3
GTEX-15DYW-0011-R8b-SM-GRR3B
60-69 years, female
616.6
GTEX-1GN73-0011-R8b-SM-CKZNY
60-69 years, male
615.3
GTEX-15ER7-0011-R8a-SM-7KUL2
20-29 years, female
612.8
GTEX-11DXW-0011-R8a-SM-GIN8T
40-49 years, male
612.3
GTEX-13RTJ-0011-R8b-SM-5O9DL
60-69 years, male
610.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E
60-69 years, male
603.0
GTEX-11GS4-0011-R8b-SM-GI4XA
60-69 years, male
600.8
GTEX-T5JC-0011-R8A-SM-32PLM
20-29 years, male
596.9
GTEX-13OVH-0011-R8b-SM-5MR35
70-79 years, male
596.8
GTEX-13OW8-0011-R8a-SM-5L3G5
60-69 years, male
596.8
GTEX-1PWST-0011-R8a-SM-F3K5P
70-79 years, male
594.7
GTEX-11WQC-0011-R8b-SM-57WCH
60-69 years, male
594.1
GTEX-1KANB-0011-R8a-SM-F3K5N
50-59 years, male
593.4
GTEX-1F48J-0011-R8a-SM-9OSWW
50-59 years, female
592.8
GTEX-1LSNL-0011-R8b-SM-F2TAH
50-59 years, male
592.4
GTEX-1P4AB-0011-R8a-SM-F341R
50-59 years, male
587.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K
50-59 years, female
580.5
GTEX-1GN2E-0011-R8a-SM-CE6RK
60-69 years, male
579.2
GTEX-1HB9E-0011-R8b-SM-A9G1O
50-59 years, male
578.6
GTEX-1RDX4-0011-R8a-SM-G8LLT
50-59 years, female
576.7
GTEX-1C6VR-0011-R8b-SM-7MXUF
60-69 years, male
576.3
GTEX-16NPV-0011-R8a-SM-7EPH8
50-59 years, female
576.2
GTEX-1399T-0011-R8b-SM-5IJD8
60-69 years, male
575.3
GTEX-QMR6-0011-R8A-SM-32PKJ
50-59 years, male
574.9
GTEX-17EVP-0011-R8b-SM-7DUF9
40-49 years, male
574.7
GTEX-14PJO-0011-R8a-SM-6AJAL
60-69 years, male
573.2
GTEX-13CF2-0011-R8b-SM-5IJCX
60-69 years, male
571.4
GTEX-1F6IF-0011-R8a-SM-9OSX5
60-69 years, male
568.6
GTEX-14DAQ-0011-R8a-SM-G9ERP
60-69 years, female
567.0
GTEX-ZXG5-0011-R8a-SM-57WD1
60-69 years, male
566.9
GTEX-11GSO-0011-R8b-SM-GJ3PM
60-69 years, male
564.7
GTEX-1OJC4-0011-R8a-SM-F3K5B
50-59 years, female
564.4
GTEX-11WQK-0011-R8a-SM-5BC7C
50-59 years, male
560.6
GTEX-14BIL-0011-R8b-SM-69LQK
50-59 years, male
558.9
GTEX-1KWVE-0011-R8a-SM-F3K4V
30-39 years, male
555.1
GTEX-1E1VI-0011-R8b-SM-ARU8E
50-59 years, male
554.2
GTEX-14PJM-0011-R8b-SM-69LPD
50-59 years, female
551.3
GTEX-11ONC-0011-R8b-SM-5NQ87
60-69 years, male
551.0
GTEX-145LS-0011-R8b-SM-5PNXA
60-69 years, female
540.9
GTEX-1HSKV-0011-R8a-SM-CL54X
60-69 years, male
536.3
GTEX-WZTO-0011-R8A-SM-4E3II
40-49 years, male
535.3
GTEX-1GF9V-0011-R8b-SM-CE6RB
60-69 years, male
533.2
GTEX-147F4-0011-R8b-SM-5S2UN
50-59 years, male
531.2
GTEX-1GTWX-0011-R8a-SM-CE6RM
60-69 years, male
531.0
GTEX-1HCVE-0011-R8a-SM-ARU7A
50-59 years, male
529.1
GTEX-14BMV-0011-R8a-SM-G9ERM
50-59 years, male
525.6
GTEX-1KD4Q-0011-R8a-SM-F341N
40-49 years, male
525.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J
60-69 years, male
523.3
GTEX-17HG3-0011-R8a-SM-79OK7
30-39 years, female
520.8
GTEX-13SLW-0011-R8b-SM-5SI64
70-79 years, male
512.2
GTEX-12ZZX-0011-R8a-SM-5DUW8
40-49 years, female
506.3
GTEX-13G51-0011-R8b-SM-5LZZ4
60-69 years, male
506.0
GTEX-13N1W-0011-R8a-SM-5MR56
70-79 years, male
505.2
GTEX-1R46S-0011-R8a-SM-F3K4Q
60-69 years, female
505.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS
50-59 years, male
504.6
GTEX-1MJK2-0011-R8a-SM-F341I
50-59 years, male
502.1
GTEX-X585-0011-R8A-SM-46MUX
50-59 years, male
494.6
GTEX-12WSM-0011-R8a-SM-5DUWJ
60-69 years, male
494.4
GTEX-13OW6-0011-R8a-SM-5L3GF
50-59 years, male
490.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C
50-59 years, male
488.5
GTEX-13NZA-0011-R8b-SM-5KM2Q
60-69 years, male
485.6
GTEX-1B996-0011-R8b-SM-79OOS
60-69 years, male
472.3
GTEX-13OW7-0011-R8b-SM-5L3HR
50-59 years, male
467.6
GTEX-ZDXO-0011-R8a-SM-4WWD7
60-69 years, male
454.7
GTEX-1N2EE-0011-R8a-SM-F3K4X
60-69 years, male
453.6
GTEX-1LVA9-0011-R8a-SM-F3K5G
50-59 years, male
401.5
GTEX-14ASI-0011-R8b-SM-5S2UB
60-69 years, male
390.0
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HYPOTHALAMUS - Pig RNA-seqi
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
418.9
Pig sample
Sample description
nTPM
Hypothalamus nTPM: 418.9
Samples: 4
Max nTPM: 564.0
Min nTPM: 268.3
Sample A
Female
564.0
Sample B
Female
420.2
Sample C
Male
423.2
Sample D
Male
268.3
HYPOTHALAMUS - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
271.3
Mouse sample
Sample description
nTPM
Hypothalamus nTPM: 271.3
Samples: 4
Max nTPM: 289.6
Min nTPM: 253.8
Sample A
275.0
Sample B
289.6
Sample C
266.8
Sample D
253.8
HYPOTHALAMUS - Rat RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
14.5
Rat sample
Sample description
nTPM
Hypothalamus nTPM: 14.5
Samples: 4
Max nTPM: 17.4
Min nTPM: 12.4
Sample A
12.4
Sample A
12.9
Sample A
17.4
Sample A
15.3
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The Human Protein Atlas project is funded
