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  • TISSUE

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  • RPL7
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:790.8 nTPM
HPA Brain:495.6 nTPM
GTEx:790.8 nTPM
Pig:417.5 nTPM
Mouse:617.5 nTPM
Allen mouse:17.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

495.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 374.1
1961 Female, age 42, unknown 400.9
2226 Male, age 75, left hemisphere 347.3
Dorsomedial nucleus
nTPM: 349.9
2017 Female, age 42, unknown 363.3
2041 Female, age 72, unknown 361.8
1989 Male, age 62, unknown 324.8
Lateral hypothalamic area
nTPM: 431.3
2228 Male, age 66, unknown 479.6
1791 Male, age 80, right hemisphere 428.8
2412 Male, age 62, unknown 428.3
2271 Male, age 75, both hemispheres 388.5
Mammillary body
nTPM: 417.7
1945 Male, age 80, right hemisphere 452.2
1834 Female, age 42, unknown 447.4
1948 Female, age 72, unknown 414.7
1923 Female, age 72, unknown 412.5
2413 Male, age 66, unknown 361.9
Paraventricular nucleus
nTPM: 439.0
2700 Male, age 62, unknown 439.0
Preoptic area
nTPM: 391.1
1861 Female, age 42, unknown 448.4
2414 Female, age 72, unknown 382.8
1907 Male, age 80, right hemisphere 342.1
Supraoptic nucleus
nTPM: 495.6
1894 Female, age 72, unknown 559.6
2043 Male, age 62, unknown 484.3
2835 Female, age 72, unknown 443.0
Ventromedial nucleus
nTPM: 431.6
1982 Female, age 72, unknown 435.9
1822 Female, age 42, unknown 427.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

790.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 790.8
Samples: 257

Max nTPM: 2360.1
Min nTPM: 390.0
Std nTPM: 273.7
Median nTPM: 732.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 2360.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1953.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1722.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1710.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1689.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1562.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1545.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1525.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1508.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1489.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1456.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1455.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1364.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1361.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1326.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1322.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1269.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 1254.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1246.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1204.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1165.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1162.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 1142.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1139.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1137.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1120.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1103.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1094.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1090.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1054.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1052.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1046.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1028.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1019.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1000.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1000.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 996.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 993.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 986.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 986.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 978.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 972.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 971.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 958.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 958.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 957.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 955.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 955.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 946.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 941.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 940.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 935.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 923.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 922.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 918.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 916.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 916.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 916.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 901.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 894.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 890.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 889.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 887.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 880.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 876.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 873.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 867.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 862.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 855.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 852.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 847.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 842.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 839.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 837.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 833.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 826.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 823.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 823.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 821.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 820.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 819.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 819.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 819.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 819.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 817.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 814.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 810.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 810.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 808.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 807.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 806.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 806.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 804.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 801.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 798.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 798.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 796.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 793.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 791.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 789.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 789.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 789.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 788.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 788.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 787.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 784.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 782.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 778.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 773.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 773.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 768.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 763.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 762.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 760.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 755.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 752.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 749.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 748.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 746.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 746.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 743.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 742.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 742.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 738.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 736.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 735.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 733.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 732.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 732.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 731.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 730.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 725.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 722.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 721.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 712.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 711.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 707.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 704.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 703.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 702.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 702.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 701.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 701.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 700.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 699.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 697.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 693.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 686.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 686.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 686.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 685.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 685.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 685.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 682.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 680.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 678.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 678.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 674.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 674.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 673.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 672.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 670.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 668.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 667.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 666.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 665.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 662.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 661.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 661.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 661.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 658.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 658.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 658.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 657.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 647.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 644.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 643.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 641.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 637.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 635.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 630.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 627.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 627.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 625.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 622.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 622.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 622.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 620.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 618.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 618.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 616.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 615.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 612.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 612.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 610.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 603.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 600.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 596.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 596.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 596.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 594.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 594.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 593.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 592.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 592.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 587.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 580.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 579.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 578.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 576.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 576.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 576.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 575.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 574.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 574.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 573.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 571.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 568.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 567.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 566.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 564.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 564.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 560.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 558.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 555.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 554.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 551.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 551.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 540.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 536.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 535.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 533.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 531.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 531.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 529.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 525.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 525.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 523.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 520.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 512.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 506.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 506.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 505.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 505.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 504.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 502.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 494.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 494.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 490.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 488.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 485.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 472.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 467.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 454.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 453.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 401.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 390.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

417.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 417.5
Samples: 4

Max nTPM: 561.2
Min nTPM: 267.6
Sample A Female 561.2
Sample B Female 419.3
Sample C Male 421.9
Sample D Male 267.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

617.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 617.5
Samples: 4

Max nTPM: 683.5
Min nTPM: 584.0
Sample A Male 593.8
Sample B Male 683.5
Sample C Female 608.8
Sample D Female 584.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 17.9
68410596 Antisense, RP_041214_02_C02, Mouse strain C57BL/6J (56 days, male) 17.9

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