HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:1007.4 nTPM
HPA Brain:226.1 nTPM
GTEx:1007.4 nTPM
FANTOM5:81.0 Scaled Tags Per Million
Mouse:196.9 nTPM
Allen mouse:11.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060776Antibody HPA063379
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 226.1
Sample id Sample description nTPM
Hippocampus
nTPM: 221.2
2529 Female, age 94, left hemisphere 245.5
1898 Male, age 80, left hemisphere 233.9
2621 Female, age 67, right hemisphere 227.4
1855 Male, age 76, left hemisphere 217.4
1911 Female, age 85, right hemisphere 213.9
2148 Female, age 91, left hemisphere 188.9
Dentate gyrus
nTPM: 205.8
2530 Female, age 94, left hemisphere 253.1
2010 Male, age 76, both hemispheres 251.2
2246 Female, age 85, both hemispheres 198.8
2531 Female, age 67, both hemispheres 197.6
1927 Female, age 91, both hemispheres 170.1
2528 Male, age 74, both hemispheres 163.9
Entorhinal gyrus
nTPM: 218.0
2686 Male, age 75, right hemisphere 273.0
2117 Female, age 91, right hemisphere 240.1
1787 Male, age 76, left hemisphere 223.7
1938 Female, age 85, left hemisphere 208.8
2764 Male, age 80, right hemisphere 194.7
2613 Female, age 94, left hemisphere 168.0
Hippocampus, CA1
nTPM: 200.4
2045 Male, age 76, both hemispheres 242.1
1873 Female, age 85, both hemispheres 215.6
2527 Male, age 74, both hemispheres 190.4
2082 Female, age 91, right hemisphere 182.1
2749 Male, age 80, left hemisphere 172.0
Hippocampus, CA2
nTPM: 202.2
2437 Female, age 94, left hemisphere 219.0
1892 Male, age 76, both hemispheres 214.3
1940 Female, age 85, left hemisphere 207.6
1963 Male, age 80, left hemisphere 203.7
2113 Female, age 91, right hemisphere 192.1
2249 Male, age 74, both hemispheres 176.6
Hippocampus, CA3
nTPM: 187.0
1867 Male, age 76, both hemispheres 239.0
1891 Female, age 85, both hemispheres 219.7
2861 Female, age 67, both hemispheres 191.1
2436 Male, age 74, both hemispheres 171.7
2137 Male, age 80, left hemisphere 168.4
2620 Female, age 94, left hemisphere 132.4
Parahippocampal cortex
nTPM: 203.3
2018 Male, age 76, both hemispheres 286.5
1850 Male, age 80, both hemispheres 222.7
2692 Male, age 74, both hemispheres 211.1
2532 Female, age 72, left hemisphere 209.0
2245 Female, age 91, both hemispheres 200.8
1933 Female, age 85, both hemispheres 200.4
1990 Female, age 91, right hemisphere 196.9
2250 Female, age 67, right hemisphere 192.3
2622 Female, age 67, right hemisphere 171.6
2693 Female, age 94, both hemispheres 142.0
Perirhinal gyrus
nTPM: 199.1
1847 Female, age 91, left hemisphere 225.2
1841 Female, age 85, right hemisphere 217.8
1794 Male, age 80, right hemisphere 188.0
2521 Female, age 94, right hemisphere 182.4
2848 Male, age 76, right hemisphere 182.2
Subiculum
nTPM: 226.1
2042 Male, age 76, both hemispheres 277.8
2438 Female, age 94, left hemisphere 250.6
1901 Male, age 80, both hemispheres 232.2
1977 Female, age 85, both hemispheres 223.3
2619 Male, age 74, both hemispheres 203.3
2729 Female, age 91, right hemisphere 169.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1007.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1007.4
Samples: 255

Max nTPM: 2513.3
Min nTPM: 365.5
Std nTPM: 365.3
Median nTPM: 931.6
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2513.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2477.3
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 2385.3
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2315.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2239.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1977.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1816.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1769.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1761.0
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 1757.4
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 1731.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 81.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.0
FF:10169-103B7 60 years, female 123.5
FF:10153-102I9 76 years, female 38.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 196.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 193.3
Samples: 4

Max nTPM: 201.0
Min nTPM: 185.6
Sample A Male 185.6
Sample B Male 199.3
Sample C Female 201.0
Sample D Female 187.4
Hippocampal formation
nTPM: 196.9
Samples: 4

Max nTPM: 218.5
Min nTPM: 184.4
Sample A Male 218.5
Sample B Male 184.4
Sample C Female 191.5
Sample D Female 193.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.8
69262228 Antisense, RP_050301_01_F08, Mouse strain C57BL/6J (56 days, male) 11.8

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