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RPL27A
HPA
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  • RPL27A
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1342.2 nTPM
HPA Brain:360.6 nTPM
GTEx:1342.2 nTPM
FANTOM5:67.1 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

360.6
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 293.8
1981 Female, age 72, midline 355.6
2565 Male, age 75, midline 327.5
2048 Male, age 55, midline 326.9
2194 Female, age 79, both hemispheres 237.7
2816 Male, age 47, midline 221.5
Cervical spinal cord, dorsal horn
nTPM: 303.8
2069 Male, age 47, both hemispheres 378.3
2173 Female, age 72, unknown 374.4
2296 Male, age 66, both hemispheres 332.3
1877 Male, age 55, unknown 302.8
2721 Male, age 90, both hemispheres 224.5
2297 Male, age 75, both hemispheres 210.6
Cervical spinal cord, ventral horn
nTPM: 360.6
2809 Male, age 90, both hemispheres 479.8
2098 Female, age 72, unknown 469.8
2480 Male, age 75, both hemispheres 448.0
2295 Male, age 66, both hemispheres 289.5
2068 Male, age 55, unknown 287.5
2820 Female, age 79, both hemispheres 188.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1342.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1342.2
Samples: 204

Max nTPM: 3205.6
Min nTPM: 552.7
Std nTPM: 425.1
Median nTPM: 1278.9
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 3205.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2410.6
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 2375.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 2372.5
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 2296.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 2259.9
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 2227.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 2216.0
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 2158.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 2141.0
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 2133.7
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 2120.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 2057.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 2042.6
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 2040.2
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 2026.7
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 2020.8
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 1994.5
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 1989.8
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1960.7
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 1936.6
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1936.4
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 1918.9
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 1899.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1884.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1880.4
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 1846.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1827.1
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1811.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1790.4
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1777.2
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 1776.8
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 1746.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1742.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1741.7
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 1740.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1737.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1733.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1705.2
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 1685.5
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 1684.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1675.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1673.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1672.9
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 1671.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1668.3
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1652.3
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1646.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1633.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1612.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1603.3
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1598.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1585.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1583.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1571.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1563.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1559.2
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 1556.6
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1548.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1523.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1522.6
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1520.7
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1499.1
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 1487.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1478.6
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 1476.4
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 1474.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1472.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1465.9
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 1459.9
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 1447.3
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 1436.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1433.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1417.5
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 1416.0
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1407.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1404.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1380.0
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 1379.4
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 1356.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1352.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1350.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1348.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1345.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1333.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1326.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1326.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1323.7
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 1321.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1314.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1312.2
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 1308.9
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 1308.4
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 1303.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1296.0
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1294.7
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 1293.7
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 1293.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1283.5
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 1283.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1281.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1281.0
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 1276.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1271.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1269.1
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 1267.3
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 1267.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1262.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1261.0
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 1260.6
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1260.5
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 1258.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1257.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1257.1
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1253.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1249.9
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 1241.2
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 1232.5
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 1224.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1213.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1192.3
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 1188.1
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1187.6
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1178.6
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1178.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1177.2
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1172.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1169.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1169.1
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 1167.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1163.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1161.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1158.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1158.4
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1157.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1157.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1155.7
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1153.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1136.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1134.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1129.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1127.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1123.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1100.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1093.4
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1084.1
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 1082.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1072.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1049.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1043.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1033.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1029.6
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 1027.7
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 1026.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1013.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1004.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 993.9
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 977.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 973.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 969.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 963.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 957.5
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 954.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 951.8
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 946.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 944.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 934.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 930.6
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 929.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 928.8
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 923.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 918.5
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 916.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 891.1
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 890.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 883.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 882.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 877.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 876.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 868.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 867.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 865.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 861.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 858.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 858.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 847.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 834.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 828.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 814.6
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 813.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 803.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 796.9
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 786.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 778.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 747.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 723.1
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 709.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 698.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 694.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 670.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 668.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 657.6
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 573.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 552.7
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

67.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 67.1
FF:10181-103D1 60 years, female 89.0
FF:10159-103A6 76 years, female 45.3

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