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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:171.5 nTPM
HPA Brain:366.9 nTPM
GTEx:171.5 nTPM
Pig:32.0 nTPM
Mouse:14.9 nTPM
Allen mouse:3.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

366.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 76.3
1961 Female, age 42, unknown 77.9
2226 Male, age 75, left hemisphere 74.7
Dorsomedial nucleus
nTPM: 121.8
2041 Female, age 72, unknown 239.8
2017 Female, age 42, unknown 70.7
1989 Male, age 62, unknown 54.9
Lateral hypothalamic area
nTPM: 254.6
2228 Male, age 66, unknown 489.6
1791 Male, age 80, right hemisphere 227.5
2412 Male, age 62, unknown 223.8
2271 Male, age 75, both hemispheres 77.7
Mammillary body
nTPM: 118.9
1923 Female, age 72, unknown 149.1
1834 Female, age 42, unknown 146.7
2413 Male, age 66, unknown 129.2
1945 Male, age 80, right hemisphere 91.9
1948 Female, age 72, unknown 77.5
Paraventricular nucleus
nTPM: 184.1
2700 Male, age 62, unknown 184.1
Preoptic area
nTPM: 111.9
1907 Male, age 80, right hemisphere 170.1
2414 Female, age 72, unknown 113.8
1861 Female, age 42, unknown 51.9
Supraoptic nucleus
nTPM: 366.9
2043 Male, age 62, unknown 466.7
1894 Female, age 72, unknown 414.4
2835 Female, age 72, unknown 219.7
Ventromedial nucleus
nTPM: 178.8
1822 Female, age 42, unknown 209.9
1982 Female, age 72, unknown 147.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 171.5
Samples: 257

Max nTPM: 967.5
Min nTPM: 7.9
Std nTPM: 144.7
Median nTPM: 129.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 967.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 667.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 665.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 621.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 609.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 602.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 541.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 539.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 532.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 484.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 475.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 459.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 452.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 452.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 450.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 442.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 441.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 435.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 431.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 418.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 412.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 398.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 396.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 394.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 374.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 360.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 359.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 347.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 342.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 338.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 336.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 329.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 327.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 321.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 320.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 319.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 314.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 313.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 309.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 305.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 294.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 293.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 289.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 288.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 287.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 282.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 279.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 275.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 273.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 272.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 270.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 268.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 256.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 256.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 254.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 254.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 254.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 250.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 246.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 244.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 235.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 234.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 233.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 230.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 230.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 230.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 229.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 229.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 229.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 227.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 224.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 222.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 217.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 217.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 211.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 211.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 205.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 203.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 202.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 202.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 202.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 201.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 199.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 199.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 197.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 196.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 193.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 192.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 188.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 188.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 187.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 185.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 184.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 182.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 182.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 179.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 179.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 175.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 173.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 170.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 164.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 163.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 160.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 160.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 157.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 157.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 156.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 155.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 154.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 154.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 153.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 146.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 145.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 145.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 141.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 141.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 140.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 139.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 139.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 137.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 137.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 136.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 136.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 136.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 132.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 132.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 131.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 131.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 129.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 127.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 127.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 126.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 124.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 123.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 123.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 121.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 119.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 118.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 117.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 117.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 116.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 113.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 112.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 112.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 112.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 112.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 110.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 109.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 107.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 107.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 105.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 104.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 104.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 102.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 101.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 100.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 99.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 98.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 97.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 95.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 95.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 95.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 95.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 95.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 93.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 91.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 91.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 90.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 89.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 89.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 88.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 87.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 87.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 81.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 80.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 80.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 78.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 77.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 76.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 75.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 75.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 75.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 73.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 72.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 71.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 71.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 68.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 67.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 66.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 66.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 64.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 63.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 63.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 62.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 61.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 60.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 60.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 60.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 58.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 58.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 58.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 56.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 56.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 56.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 55.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 55.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 54.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 54.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 53.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 52.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 52.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 50.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 50.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 48.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 48.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 47.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 46.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 46.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 45.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 44.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 44.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 43.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 42.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 42.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 41.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 41.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 41.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 41.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 40.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 39.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 39.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 39.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 39.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 37.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 37.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 36.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 35.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 30.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 30.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 30.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 29.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 28.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 26.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 25.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 23.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 21.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 21.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 21.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 20.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 19.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 18.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 15.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 14.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 13.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 12.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 9.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 7.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 32.0
Samples: 4

Max nTPM: 65.7
Min nTPM: 11.9
Sample A Female 24.1
Sample B Female 11.9
Sample C Male 65.7
Sample D Male 26.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 14.9
Samples: 4

Max nTPM: 24.1
Min nTPM: 9.9
Sample A Male 11.3
Sample B Male 24.1
Sample C Female 9.9
Sample D Female 14.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.2
80342219 Antisense, RP_080109_01_B10, Mouse strain C57BL/6J (56 days, male) 3.9
459 Antisense, RP_Baylor_253909, Mouse strain C57BL/6J (56 days, male) 2.5
79912554 Antisense, RP_080109_01_B10, Mouse strain C57BL/6J (56 days, male) 2.1

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