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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:170.4 nTPM
HPA Brain:208.2 nTPM
GTEx:170.4 nTPM
Pig:55.6 nTPM
Mouse:62.3 nTPM
Allen mouse:1.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

208.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 197.7
1961 Female, age 42, unknown 244.6
2226 Male, age 75, left hemisphere 150.8
Dorsomedial nucleus
nTPM: 130.5
2041 Female, age 72, unknown 142.5
2017 Female, age 42, unknown 131.9
1989 Male, age 62, unknown 117.2
Lateral hypothalamic area
nTPM: 123.0
1791 Male, age 80, right hemisphere 156.5
2271 Male, age 75, both hemispheres 133.3
2412 Male, age 62, unknown 115.8
2228 Male, age 66, unknown 86.4
Mammillary body
nTPM: 117.8
1923 Female, age 72, unknown 138.9
1834 Female, age 42, unknown 131.3
1948 Female, age 72, unknown 117.6
2413 Male, age 66, unknown 108.0
1945 Male, age 80, right hemisphere 92.9
Paraventricular nucleus
nTPM: 104.8
2700 Male, age 62, unknown 104.8
Preoptic area
nTPM: 109.2
1861 Female, age 42, unknown 114.6
1907 Male, age 80, right hemisphere 110.9
2414 Female, age 72, unknown 102.1
Supraoptic nucleus
nTPM: 133.8
2835 Female, age 72, unknown 140.6
2043 Male, age 62, unknown 137.3
1894 Female, age 72, unknown 123.5
Ventromedial nucleus
nTPM: 208.2
1982 Female, age 72, unknown 213.6
1822 Female, age 42, unknown 202.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 170.4
Samples: 257

Max nTPM: 329.9
Min nTPM: 67.2
Std nTPM: 44.5
Median nTPM: 167.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 329.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 302.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 288.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 275.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 265.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 263.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 263.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 262.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 259.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 259.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 258.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 258.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 255.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 252.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 250.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 245.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 241.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 241.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 240.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 239.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 236.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 234.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 234.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 233.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 232.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 232.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 231.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 230.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 229.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 228.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 228.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 227.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 226.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 222.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 222.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 221.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 221.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 219.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 219.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 217.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 216.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 216.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 215.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 215.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 214.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 214.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 212.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 211.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 210.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 209.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 207.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 207.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 205.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 205.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 204.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 202.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 202.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 202.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 201.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 201.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 198.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 198.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 198.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 197.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 197.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 196.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 195.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 194.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 194.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 193.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 192.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 192.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 192.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 191.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 191.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 191.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 190.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 187.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 186.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 186.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 185.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 185.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 185.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 184.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 184.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 184.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 183.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 183.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 182.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 182.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 182.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 181.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 180.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 180.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 180.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 180.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 179.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 179.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 179.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 179.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 178.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 178.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 178.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 177.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 177.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 176.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 176.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 176.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 175.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 174.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 174.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 173.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 172.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 171.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 171.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 170.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 170.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 170.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 170.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 170.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 169.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 169.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 168.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 168.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 168.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 168.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 168.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 167.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 167.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 166.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 166.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 166.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 165.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 164.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 164.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 164.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 164.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 163.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 163.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 162.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 161.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 161.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 161.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 161.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 160.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 160.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 160.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 160.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 159.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 159.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 159.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 157.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 157.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 156.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 156.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 155.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 154.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 154.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 153.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 153.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 153.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 152.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 152.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 152.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 152.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 152.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 151.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 151.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 151.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 150.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 149.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 148.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 148.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 145.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 144.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 144.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 144.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 144.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 143.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 143.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 143.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 143.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 142.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 140.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 140.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 140.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 139.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 139.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 138.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 137.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 137.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 135.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 135.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 135.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 135.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 135.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 134.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 133.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 133.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 133.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 132.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 132.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 132.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 131.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 131.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 130.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 130.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 130.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 130.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 130.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 129.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 129.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 128.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 127.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 127.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 127.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 126.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 126.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 126.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 125.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 124.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 124.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 123.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 123.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 123.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 122.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 122.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 122.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 122.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 121.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 121.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 120.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 120.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 119.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 119.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 115.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 114.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 114.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 114.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 112.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 110.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 109.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 108.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 106.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 105.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 104.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 101.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 97.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 97.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 96.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 96.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 90.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 83.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 81.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 79.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 76.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 67.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 55.6
Samples: 4

Max nTPM: 58.4
Min nTPM: 48.9
Sample A Female 58.4
Sample B Female 48.9
Sample C Male 58.4
Sample D Male 56.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 62.4
Samples: 4

Max nTPM: 73.7
Min nTPM: 50.1
Sample A Male 70.4
Sample B Male 73.7
Sample C Female 50.1
Sample D Female 55.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.4
70612727 Antisense, RP_050725_01_C05, Mouse strain C57BL/6J (56 days, male) 2.2
75695661 Antisense, RP_060518_04_C12, Mouse strain C57BL/6J (56 days, male) 0.6

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