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RPS29
HPA
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  • RPS29
TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:4679.1 nTPM
HPA:3488.8 nTPM
GTEx:4679.1 nTPM
FANTOM5:74.5 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA004107
Ovarian stroma cells Low



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3488.8
overview
Female, age 64
Ovary sample 192
nTPM: 1981.5
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 2982.4
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 1639.9
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 2386.7
N/A
Female, age 16
Ovary sample 3663
nTPM: 10329.2
N/A
Female, age 20
Ovary sample 3664
nTPM: 3260.7
N/A
Female, age 32
Ovary sample 3665
nTPM: 1841.1

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4679.1
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 4679.1
Samples: 193

Max nTPM: 10963.6
Min nTPM: 2214.8
Std nTPM: 1689.9
Median nTPM: 4296.6
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 10963.6
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 10937.8
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 10710.9
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 10334.4
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 9517.5
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 9081.3
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 9013.5
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 8783.4
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 8406.0
GTEX-183WM-1926-SM-72D5F 70-79 years, female 8232.0
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 8120.1
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 7942.2
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 7827.8
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 7700.0
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 7573.9
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 7386.0
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 7263.6
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 7080.4
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 6673.3
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 6561.3
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 6369.6
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 6322.2
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 6318.8
GTEX-QVJO-3126-SM-COH22 60-69 years, female 6230.6
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 6226.3
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 6168.8
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 6167.2
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 6064.6
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 6037.6
GTEX-15EOM-1526-SM-68723 20-29 years, female 6012.1
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 6009.3
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 5967.5
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 5917.2
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 5863.9
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 5839.5
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 5834.0
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 5814.1
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 5787.8
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 5712.3
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 5708.2
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 5706.3
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 5656.9
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 5647.5
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 5645.5
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 5596.7
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 5587.1
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 5576.7
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 5575.6
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 5567.0
GTEX-S32W-1226-SM-4AD67 50-59 years, female 5486.4
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 5456.8
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 5407.2
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 5388.6
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 5354.2
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 5329.7
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 5279.8
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 5268.6
GTEX-RU72-2226-SM-46MUE 50-59 years, female 5120.9
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 5093.6
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 5086.6
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 5054.6
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 5033.0
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 5009.8
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 4977.7
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 4967.9
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 4967.8
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 4917.7
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 4877.8
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 4793.4
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 4791.0
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 4700.7
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 4698.5
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 4663.3
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 4658.7
GTEX-R45C-2526-SM-GRR28 60-69 years, female 4619.9
GTEX-14BIN-1426-SM-664NI 50-59 years, female 4618.1
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 4609.6
GTEX-13SLX-2426-SM-664OM 50-59 years, female 4560.1
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 4533.4
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 4520.1
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 4519.8
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 4493.0
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 4487.4
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 4442.5
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 4433.9
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 4415.2
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 4402.1
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 4393.5
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 4385.5
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 4360.1
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 4344.4
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 4344.4
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 4343.6
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 4339.0
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 4318.1
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 4305.7
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 4296.6
GTEX-S341-0726-SM-4AD5R 40-49 years, female 4271.6
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 4260.5
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 4231.0
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 4225.0
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 4222.0
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 4208.1
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 4199.3
GTEX-P78B-1926-SM-3P616 40-49 years, female 4191.9
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 4175.3
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 4172.9
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 4163.6
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 4153.1
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 4148.7
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 4142.9
GTEX-11I78-1926-SM-59878 50-59 years, female 4132.2
GTEX-QCQG-1426-SM-48U22 50-59 years, female 4121.7
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 4117.5
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 4103.3
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 4082.8
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 4055.7
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 4050.1
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 4047.5
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 4029.3
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 4024.2
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 3992.4
GTEX-14PKV-1226-SM-6871T 20-29 years, female 3943.6
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 3942.1
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 3938.5
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 3917.5
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 3915.2
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 3898.1
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 3881.0
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 3878.3
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 3877.2
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 3868.6
GTEX-145ME-1226-SM-5MR87 40-49 years, female 3857.1
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 3850.7
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 3799.9
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 3731.4
GTEX-18D9A-0826-SM-718C1 30-39 years, female 3690.0
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 3647.4
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 3628.8
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 3614.4
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 3611.4
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 3583.5
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 3581.5
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 3564.8
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 3548.5
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 3535.9
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 3524.9
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 3524.1
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 3437.6
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 3405.9
GTEX-Q734-0726-SM-48TZP 40-49 years, female 3390.1
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 3379.3
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 3337.7
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 3309.4
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 3286.4
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 3286.2
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 3276.1
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 3239.9
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 3235.8
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 3220.2
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 3200.0
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 3196.3
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 3182.3
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 3136.9
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 3131.8
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 3126.3
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 3104.9
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 3065.6
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 3040.0
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 3032.6
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 2994.8
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 2992.5
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 2986.3
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 2979.0
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 2943.4
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 2941.1
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 2920.1
GTEX-14JG6-0626-SM-68716 30-39 years, female 2840.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2839.7
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 2797.3
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 2761.6
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 2706.2
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 2688.2
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 2615.9
GTEX-R55G-1526-SM-48FER 40-49 years, female 2578.2
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 2573.2
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 2559.0
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 2483.5
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 2376.3
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 2325.0
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 2299.5
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 2249.9
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 2214.8
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OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

74.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 74.5
FF:10020-101D2 47,75,84 years, female 74.5

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