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RPS29
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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2531.2 nTPM
HPA:1422.7 nTPM
GTEx:2531.2 nTPM
FANTOM5:259.9 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA004107
Glandular cells High



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1422.7
overview
Female, age 68
Salivary gland sample 216
nTPM: 1649.5
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1411.9
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1206.6
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2531.2
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 2531.2
Samples: 181

Max nTPM: 6990.5
Min nTPM: 1469.5
Std nTPM: 689.7
Median nTPM: 2402.3
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 6990.5
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 5469.6
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 4949.6
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 4811.1
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 3973.7
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 3858.2
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 3780.5
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 3776.4
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 3553.5
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 3543.1
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 3492.7
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 3465.0
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 3431.2
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 3320.7
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 3307.0
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 3279.9
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 3268.0
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 3248.0
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 3227.1
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 3219.1
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 3215.9
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 3143.4
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 3133.5
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 3130.5
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 3124.7
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 3113.5
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 3089.6
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 3085.3
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 3070.3
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 3069.6
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 3062.4
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 3061.4
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 3037.2
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 3019.1
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 2988.1
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 2938.9
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 2927.2
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 2891.6
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 2882.2
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 2849.0
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 2845.6
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 2843.0
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 2840.3
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 2840.0
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 2812.2
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 2807.4
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 2806.2
GTEX-15SHV-2226-SM-6M464 60-69 years, male 2795.8
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 2791.0
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 2778.5
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 2772.0
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 2758.8
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 2755.0
GTEX-146FR-1226-SM-5MR78 60-69 years, female 2752.2
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 2746.0
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 2742.1
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 2709.0
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 2683.9
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 2653.9
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 2649.8
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 2631.3
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 2617.5
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 2617.3
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 2613.1
GTEX-Y111-2626-SM-4TT24 50-59 years, male 2607.4
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 2590.1
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 2588.6
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 2588.5
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 2587.1
GTEX-X261-2426-SM-4PQZU 50-59 years, male 2585.7
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 2582.2
GTEX-1445S-2926-SM-5O993 60-69 years, male 2565.1
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 2547.7
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 2537.2
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 2528.7
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 2522.2
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 2511.1
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 2497.5
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 2496.0
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 2491.4
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 2491.0
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 2488.0
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 2486.0
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 2479.3
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 2475.2
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 2470.6
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 2448.8
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 2427.3
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 2414.7
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 2409.5
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 2402.3
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 2399.8
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 2398.7
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 2379.9
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 2370.0
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 2366.0
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 2360.7
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 2358.3
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 2355.7
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 2328.0
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 2324.1
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 2319.1
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 2318.6
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 2312.1
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 2308.6
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 2300.8
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 2297.6
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 2297.3
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 2288.4
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 2284.5
GTEX-11P82-0926-SM-5986X 20-29 years, male 2276.8
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 2273.1
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 2261.8
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 2247.6
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 2247.6
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 2247.3
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 2246.7
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 2232.1
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 2221.7
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 2221.3
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 2219.5
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 2216.8
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 2208.0
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 2201.8
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 2200.7
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 2199.0
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 2176.6
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 2166.3
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 2162.8
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 2137.7
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 2128.8
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 2127.6
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 2117.0
GTEX-13113-1526-SM-5EGHV 60-69 years, female 2099.8
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 2095.8
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 2092.2
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 2081.2
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 2080.8
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 2080.8
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 2067.2
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 2067.0
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 2061.3
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 2056.5
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 2055.7
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 2045.9
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 2036.8
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 2013.6
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 2010.6
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 2010.6
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 1971.7
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 1964.1
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 1944.5
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 1934.1
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 1933.3
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 1908.2
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 1904.6
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 1895.1
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 1892.1
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 1891.0
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 1872.3
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 1870.0
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 1856.3
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 1854.3
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 1836.1
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 1812.7
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 1802.7
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 1797.7
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 1791.6
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 1785.2
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 1779.1
GTEX-13O21-1926-SM-5MR39 50-59 years, male 1741.5
GTEX-178AV-1426-SM-6LLID 40-49 years, male 1739.5
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 1736.0
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 1731.4
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 1729.8
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 1695.8
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 1679.3
GTEX-1B932-0626-SM-731EM 40-49 years, female 1646.0
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 1605.6
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 1532.1
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 1469.5
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

259.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 259.9
FF:10199-103F1 23 years, male 259.9
Salivary gland
Scaled Tags Per Million: 197.1
FF:10093-102C3 16-60 years, mixed 197.1
Submaxillary gland
Scaled Tags Per Million: 203.7
FF:10202-103F4 24 years, male 203.7

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