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STPG1
COLON - Expression summary
RNA expressioni
HPA:6.4TPM
GTEx:1.2RPKM
FANTOM5:8.1Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 6.4
overview Male, age 54 Sample 1
TPM: 3.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 3.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 9.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 5.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 5.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 7.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 6.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 1.2
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 0.9
Samples: 149

Max RPKM: 1.5
Min RPKM: 0.3
Std RPKM: 0.2
Median RPKM: 0.9
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 1.5
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 1.5
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 1.4
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 1.4
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 1.4
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 1.4
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 1.4
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 1.3
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 1.3
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 1.3
Show all
Colon - Transverse
RPKM: 1.4
Samples: 196

Max RPKM: 2.9
Min RPKM: 0.2
Std RPKM: 0.5
Median RPKM: 1.3
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 2.9
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 2.9
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 2.8
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 2.7
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 2.7
GTEX-R55G-1226-SM-48FDC 40-49 years, female 2.6
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 2.4
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 2.3
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 2.3
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 2.3
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 8.1
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 5.9
FF:10014-101C5 62,83,84 years, mixed 8.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.