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RBM5
COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: High
Peripheral nerve/ganglion: High
RNA expressioni
Consensus:70.5 nTPM
HPA:44.7 nTPM
GTEx:70.5 nTPM
FANTOM5:103.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA017335Antibody HPA018011
Endothelial cells MediumHigh
Glandular cells HighHigh
Peripheral nerve/ganglion MediumHigh



COLON - HPA RNA-seqi
Average nTPM 44.7
overview Male, age 54 Colon sample 67
nTPM: 31.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview Female, age 57 Colon sample 68
nTPM: 54.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview Male, age 80 Colon sample 69
nTPM: 56.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview Male, age 68 Colon sample 70
nTPM: 33.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 68 Colon sample 76
nTPM: 61
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview Female, age 61 Colon sample 299
nTPM: 37.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview Male, age 80 Colon sample 300
nTPM: 43
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview Female, age 78 Colon sample 368
nTPM: 48.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview Male, age 84 Colon sample 381
nTPM: 47.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview Male, age 80 Colon sample 384
nTPM: 32.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview Female, age 78 Colon sample 389
nTPM: 47.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 69 Colon sample 391
nTPM: 34.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview Female, age 72 Colon sample 403
nTPM: 53.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 70.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 75.4
Samples: 373

Max nTPM: 125.8
Min nTPM: 40.9
Std nTPM: 15.1
Median nTPM: 74.7
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 125.8
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 121.4
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 121.2
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 113.7
GTEX-1JJE9-2526-SM-ARU8K 70-79 years, male 113.5
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 112.8
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 109.1
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 108.0
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 107.9
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 107.8
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 107.1
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Colon - Transverse
Average nTPM: 66.0
Samples: 406

Max nTPM: 122.3
Min nTPM: 29.9
Std nTPM: 12.9
Median nTPM: 64.8
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 122.3
GTEX-17HII-2726-SM-7MGVM 50-59 years, male 113.7
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 107.6
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 104.7
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 100.2
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 96.1
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 95.4
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 93.4
GTEX-1AYD5-1726-SM-7RHFW 50-59 years, male 93.1
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 92.7
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 92.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 103.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 103.7
FF:10014-101C5 62,83,84 years, mixed 103.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.