COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:8.9 nTPM
HPA:4.6 nTPM
GTEx:8.9 nTPM
FANTOM5:39.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA026679
Endothelial cells Low
Glandular cells Medium



COLON - HPA RNA-seqi
Average nTPM 4.6
overview
Male, age 54 		Colon sample 67
nTPM: 3.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 5.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 2.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 4.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 3.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 5.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 5.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 5.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 4.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 4.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 5.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 8.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 8.5
Samples: 373

Max nTPM: 13.4
Min nTPM: 2.3
Std nTPM: 1.7
Median nTPM: 8.7
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 13.4
GTEX-1H3VY-2526-SM-9KNW1 50-59 years, male 13.0
GTEX-17KNJ-1826-SM-7LT9N 50-59 years, male 12.6
GTEX-1J8Q3-2426-SM-CL53S 60-69 years, male 12.5
GTEX-Y8E4-2326-SM-EAZAZ 40-49 years, male 12.5
GTEX-1K2DA-1626-SM-CGQGB 50-59 years, male 12.2
GTEX-1QP67-1426-SM-E8VOO 40-49 years, female 12.0
GTEX-1JK1U-1426-SM-CNPOW 60-69 years, male 11.9
GTEX-1MGNQ-2126-SM-EV7AC 40-49 years, male 11.9
GTEX-1LBAC-1726-SM-D3L9W 20-29 years, male 11.7
GTEX-14E1K-1626-SM-664MO 50-59 years, male 11.6
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Colon - Transverse
Average nTPM: 8.9
Samples: 406

Max nTPM: 14.9
Min nTPM: 3.0
Std nTPM: 1.8
Median nTPM: 8.8
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 14.9
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 14.8
GTEX-1RAZR-1926-SM-E6CRF 40-49 years, male 14.6
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 13.9
GTEX-1H11D-2626-SM-9JGH4 40-49 years, male 13.8
GTEX-1QP9N-1026-SM-E6CPX 30-39 years, male 13.2
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 12.8
GTEX-1L5NE-2026-SM-CXZKR 50-59 years, male 12.8
GTEX-QEL4-1926-SM-D3L8D 50-59 years, male 12.8
GTEX-1LG7Z-1426-SM-CXKYV 30-39 years, male 12.6
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 12.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 39.1
FF:10014-101C5 62,83,84 years, mixed 39.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.