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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:37.7 nTPM
HPA:37.7 nTPM
GTEx:42.0 nTPM
FANTOM5:65.7 Scaled Tags Per Million
Pig:4.4 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 37.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 36.5
1981 Female, age 72, midline 39.3
2048 Male, age 55, midline 37.9
2194 Female, age 79, both hemispheres 35.3
2816 Male, age 47, midline 35.1
2565 Male, age 75, midline 34.7
Cervical spinal cord, dorsal horn
nTPM: 37.3
2296 Male, age 66, both hemispheres 42.1
2173 Female, age 72, unknown 40.1
2069 Male, age 47, both hemispheres 37.8
2297 Male, age 75, both hemispheres 35.8
1877 Male, age 55, unknown 35.2
2721 Male, age 90, both hemispheres 32.9
Cervical spinal cord, ventral horn
nTPM: 37.7
2098 Female, age 72, unknown 41.0
2480 Male, age 75, both hemispheres 40.9
2295 Male, age 66, both hemispheres 38.5
2809 Male, age 90, both hemispheres 37.3
2068 Male, age 55, unknown 34.6
2820 Female, age 79, both hemispheres 34.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 42.0
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 42.0
Samples: 159

Max nTPM: 70.1
Min nTPM: 23.2
Std nTPM: 9.3
Median nTPM: 41.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 70.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 67.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 63.0
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 60.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 60.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 60.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 60.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 59.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 58.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 57.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 57.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 56.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 55.9
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 55.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 55.5
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 54.9
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 54.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 54.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 53.9
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 53.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 53.6
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 52.9
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 52.6
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 52.2
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 52.0
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 52.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 51.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 50.3
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 50.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 50.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 49.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 49.3
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 48.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 48.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 48.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 47.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 47.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 47.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 47.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 47.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 47.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 47.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 46.9
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 46.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 46.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 46.7
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 46.6
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 46.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 46.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 46.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 46.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 46.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 46.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 45.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 45.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 45.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 45.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 44.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 44.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 44.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 44.3
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 43.9
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 43.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 43.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 43.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 43.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 43.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 43.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 43.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 42.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 42.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 42.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 42.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 42.6
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 42.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 42.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 42.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 42.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 42.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 41.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 41.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 41.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 41.6
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 41.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 41.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 40.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 40.7
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 40.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 40.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 40.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 39.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 39.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 39.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 38.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 38.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 38.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 38.6
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 38.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 38.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 38.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 38.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 38.1
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 38.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 38.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 37.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 37.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 37.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 37.2
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 37.2
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 37.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 37.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 36.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 36.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 36.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 36.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 35.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 35.9
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 35.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 35.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 35.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 35.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 34.9
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 34.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 34.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 34.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 34.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 33.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 33.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 33.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 32.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 32.7
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 32.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 32.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 32.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 32.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 32.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 32.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 31.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 31.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 31.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 31.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 31.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 31.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 30.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 30.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 29.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 29.0
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 27.3
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 26.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 26.8
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 26.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 26.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 26.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 25.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 25.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 24.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 24.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 24.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 23.2
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 65.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 65.7
FF:10181-103D1 60 years, female 70.5
FF:10159-103A6 76 years, female 61.0

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 4.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 4.2
Samples: 4

Max nTPM: 4.8
Min nTPM: 3.5
Sample A Female 4.8
Sample B Female 4.0
Sample C Male 3.5
Sample D Male 4.3
Ventral spinal cord
nTPM: 4.4
Samples: 4

Max nTPM: 4.8
Min nTPM: 3.9
Sample A Female 4.6
Sample B Female 4.4
Sample C Male 3.9
Sample D Male 4.8

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